RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 NEUROD6Q96NK8 337 aa21.06■□□□□ 0.96
CMTM3-214ENST00000567572 ZNF500O60304 480 aaPredicted RBP21.05■□□□□ 0.96
CMTM3-214ENST00000567572 TAF5LO75529 589 aa21.05■□□□□ 0.96
CMTM3-214ENST00000567572 NAP1L5Q96NT1 182 aaPredicted RBP21.05■□□□□ 0.96
CMTM3-214ENST00000567572 U3KPZ7 1027 aaPredicted RBP21.05■□□□□ 0.96
CMTM3-214ENST00000567572 SCN7AQ01118 1682 aa21.05■□□□□ 0.96
CMTM3-214ENST00000567572 DDX60Q8IY21 1712 aaKnown RBP21.05■□□□□ 0.96
CMTM3-214ENST00000567572 SH3TC1Q8TE82 1336 aa21.05■□□□□ 0.96
CMTM3-214ENST00000567572 SBF2Q86WG5 1849 aa21.04■□□□□ 0.96
CMTM3-214ENST00000567572 ST3GAL1Q11201 340 aa21.04■□□□□ 0.96
CMTM3-214ENST00000567572 GDPD2Q9HCC8 539 aa21.04■□□□□ 0.96
CMTM3-214ENST00000567572 TPCN1Q9ULQ1 816 aa21.04■□□□□ 0.96
CMTM3-214ENST00000567572 SPEF2Q9C093 1822 aa21.04■□□□□ 0.96
CMTM3-214ENST00000567572 ANKRD18BA2A2Z9 1011 aa21.04■□□□□ 0.96
CMTM3-214ENST00000567572 UTP14AQ9BVJ6 771 aaKnown RBP21.04■□□□□ 0.96
CMTM3-214ENST00000567572 AKAP2Q9Y2D5 859 aa21.04■□□□□ 0.96
CMTM3-214ENST00000567572 RIPOR2Q9Y4F9 1068 aa21.04■□□□□ 0.96
CMTM3-214ENST00000567572 ELP1O95163 1332 aa21.03■□□□□ 0.96
CMTM3-214ENST00000567572 LY75O60449 1722 aa21.03■□□□□ 0.96
CMTM3-214ENST00000567572 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.03■□□□□ 0.96
CMTM3-214ENST00000567572 DNAJC2Q99543 621 aaKnown RBP21.03■□□□□ 0.96
CMTM3-214ENST00000567572 TRPC5Q9UL62 973 aaPredicted RBP21.03■□□□□ 0.96
CMTM3-214ENST00000567572 TERF1P54274 439 aa21.02■□□□□ 0.96
CMTM3-214ENST00000567572 CLEC4GQ6UXB4 293 aa21.02■□□□□ 0.96
CMTM3-214ENST00000567572 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.02■□□□□ 0.96
CMTM3-214ENST00000567572 ZNF652Q9Y2D9 606 aa21.02■□□□□ 0.96
CMTM3-214ENST00000567572 ZKSCAN5Q9Y2L8 839 aa21.02■□□□□ 0.96
CMTM3-214ENST00000567572 NDUFB9Q9Y6M9 179 aa21.02■□□□□ 0.96
CMTM3-214ENST00000567572 RGL2O15211 777 aa21.02■□□□□ 0.95
CMTM3-214ENST00000567572 NTSR2O95665 410 aa21.02■□□□□ 0.95
CMTM3-214ENST00000567572 KCNQ4P56696 695 aa21.02■□□□□ 0.95
CMTM3-214ENST00000567572 FAM182BQ5T319 152 aa21.02■□□□□ 0.95
CMTM3-214ENST00000567572 NIP7Q9Y221 180 aaKnown RBP eCLIP21.02■□□□□ 0.95
CMTM3-214ENST00000567572 OFD1O75665 1012 aa21.01■□□□□ 0.95
CMTM3-214ENST00000567572 RC3H1Q5TC82 1133 aaKnown RBP21.01■□□□□ 0.95
CMTM3-214ENST00000567572 LDHAL6AQ6ZMR3 332 aa21.01■□□□□ 0.95
CMTM3-214ENST00000567572 KRT85P78386 507 aa21■□□□□ 0.95
CMTM3-214ENST00000567572 ZNF589Q86UQ0 364 aaPredicted RBP21■□□□□ 0.95
CMTM3-214ENST00000567572 KBTBD3Q8NAB2 608 aa21■□□□□ 0.95
CMTM3-214ENST00000567572 TPM2P07951 284 aa21■□□□□ 0.95
CMTM3-214ENST00000567572 MCMDC2Q4G0Z9 681 aa21■□□□□ 0.95
CMTM3-214ENST00000567572 LARP1BQ659C4 914 aaKnown RBP21■□□□□ 0.95
CMTM3-214ENST00000567572 VGLL2Q8N8G2 317 aa21■□□□□ 0.95
CMTM3-214ENST00000567572 LARP6Q9BRS8 491 aaKnown RBP21■□□□□ 0.95
CMTM3-214ENST00000567572 PAG1Q9NWQ8 432 aa21■□□□□ 0.95
CMTM3-214ENST00000567572 FIBPO43427 364 aa20.99■□□□□ 0.95
CMTM3-214ENST00000567572 HMGB1P09429 215 aaKnown RBP20.99■□□□□ 0.95
CMTM3-214ENST00000567572 HCLS1P14317 486 aaPredicted RBP20.99■□□□□ 0.95
CMTM3-214ENST00000567572 TOB2Q14106 344 aaPredicted RBP20.99■□□□□ 0.95
CMTM3-214ENST00000567572 FOXD4L6Q3SYB3 417 aaPredicted RBP20.99■□□□□ 0.95
CMTM3-214ENST00000567572 FOXD4L3Q6VB84 417 aaPredicted RBP20.99■□□□□ 0.95
CMTM3-214ENST00000567572 DDX46Q7L014 1031 aaKnown RBP20.99■□□□□ 0.95
CMTM3-214ENST00000567572 TAF1LQ8IZX4 1826 aa20.99■□□□□ 0.95
CMTM3-214ENST00000567572 RTL9Q8NET4 1388 aa20.99■□□□□ 0.95
CMTM3-214ENST00000567572 ABCC12Q96J65 1359 aa20.99■□□□□ 0.95
CMTM3-214ENST00000567572 ADORA1P30542 326 aa20.98■□□□□ 0.95
CMTM3-214ENST00000567572 METTL24Q5JXM2 366 aa20.98■□□□□ 0.95
CMTM3-214ENST00000567572 SEPT12Q8IYM1 358 aa20.98■□□□□ 0.95
CMTM3-214ENST00000567572 XAGE2Q96GT9 111 aa20.98■□□□□ 0.95
CMTM3-214ENST00000567572 VPS37CA5D8V6 355 aaPredicted RBP20.98■□□□□ 0.95
CMTM3-214ENST00000567572 IFIT1P09914 478 aaKnown RBP20.98■□□□□ 0.95
CMTM3-214ENST00000567572 HSP90B1P14625 803 aaKnown RBP20.98■□□□□ 0.95
CMTM3-214ENST00000567572 DNM1Q05193 864 aaKnown RBP20.98■□□□□ 0.95
CMTM3-214ENST00000567572 CNNM1Q9NRU3 951 aa20.98■□□□□ 0.95
CMTM3-214ENST00000567572 HELLSQ9NRZ9 838 aa20.98■□□□□ 0.95
CMTM3-214ENST00000567572 TCHHQ07283 1943 aa20.97■□□□□ 0.95
CMTM3-214ENST00000567572 FAM177BA6PVY3 158 aa20.97■□□□□ 0.95
CMTM3-214ENST00000567572 GOLIM4O00461 696 aa20.97■□□□□ 0.95
CMTM3-214ENST00000567572 ATP2B3Q16720 1220 aa20.97■□□□□ 0.95
CMTM3-214ENST00000567572 RNF214Q8ND24 703 aa20.97■□□□□ 0.95
CMTM3-214ENST00000567572 NEK1Q96PY6 1258 aa20.97■□□□□ 0.95
CMTM3-214ENST00000567572 SCAND2PQ9GZW5 306 aaPredicted RBP20.97■□□□□ 0.95
CMTM3-214ENST00000567572 CCNL1Q9UK58 526 aaPredicted RBP20.97■□□□□ 0.95
CMTM3-214ENST00000567572 RPS6KA4O75676 772 aa20.96■□□□□ 0.95
CMTM3-214ENST00000567572 CCDC158Q5M9N0 1113 aa20.96■□□□□ 0.95
CMTM3-214ENST00000567572 NECAB1Q8N987 351 aa20.96■□□□□ 0.95
CMTM3-214ENST00000567572 ARAP2Q8WZ64 1704 aa20.96■□□□□ 0.95
CMTM3-214ENST00000567572 DSCC1Q9BVC3 393 aa20.96■□□□□ 0.95
CMTM3-214ENST00000567572 GTF3C6Q969F1 213 aa20.95■□□□□ 0.94
CMTM3-214ENST00000567572 CHMP4CQ96CF2 233 aa20.95■□□□□ 0.94
CMTM3-214ENST00000567572 FUCA2Q9BTY2 467 aa20.95■□□□□ 0.94
CMTM3-214ENST00000567572 PDE8BO95263 885 aa20.94■□□□□ 0.94
CMTM3-214ENST00000567572 COL24A1Q17RW2 1714 aa20.94■□□□□ 0.94
CMTM3-214ENST00000567572 TTC39AQ5SRH9 613 aa20.94■□□□□ 0.94
CMTM3-214ENST00000567572 GORABQ5T7V8 394 aa20.94■□□□□ 0.94
CMTM3-214ENST00000567572 MROH5Q6ZUA9 1318 aa20.94■□□□□ 0.94
CMTM3-214ENST00000567572 LLPHQ9BRT6 129 aaKnown RBP20.94■□□□□ 0.94
CMTM3-214ENST00000567572 BCL2L12Q9HB09 334 aa20.94■□□□□ 0.94
CMTM3-214ENST00000567572 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.94■□□□□ 0.94
CMTM3-214ENST00000567572 CHGBP05060 677 aa20.94■□□□□ 0.94
CMTM3-214ENST00000567572 CCDC152Q4G0S7 254 aa20.94■□□□□ 0.94
CMTM3-214ENST00000567572 NARFQ9UHQ1 456 aa20.94■□□□□ 0.94
CMTM3-214ENST00000567572 C4BP0C0L5 1744 aa20.93■□□□□ 0.94
CMTM3-214ENST00000567572 LRRFIP1Q32MZ4 808 aaKnown RBP20.93■□□□□ 0.94
CMTM3-214ENST00000567572 GNPATO15228 680 aa20.92■□□□□ 0.94
CMTM3-214ENST00000567572 CDC37L1Q7L3B6 337 aa20.92■□□□□ 0.94
CMTM3-214ENST00000567572 ZNF512BQ96KM6 892 aaPredicted RBP20.92■□□□□ 0.94
CMTM3-214ENST00000567572 QTRT2Q9H974 415 aaKnown RBP20.92■□□□□ 0.94
CMTM3-214ENST00000567572 CASZ1Q86V15 1759 aa20.92■□□□□ 0.94
CMTM3-214ENST00000567572 SEC31BQ9NQW1 1179 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms