RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 POLR2AP24928 1970 aaKnown RBP23.67■■□□□ 1.38
LINC01238-205ENST00000567549 PITPNM2Q9BZ72 1349 aa23.67■■□□□ 1.38
LINC01238-205ENST00000567549 SPEF2Q9C093 1822 aa23.67■■□□□ 1.38
LINC01238-205ENST00000567549 ITGA6P23229 1130 aa23.66■■□□□ 1.38
LINC01238-205ENST00000567549 KCNJ4P48050 445 aa23.66■■□□□ 1.38
LINC01238-205ENST00000567549 FKBP1BP68106 108 aa23.66■■□□□ 1.38
LINC01238-205ENST00000567549 G2E3Q7L622 706 aa23.66■■□□□ 1.38
LINC01238-205ENST00000567549 ANKRD18BA2A2Z9 1011 aa23.65■■□□□ 1.38
LINC01238-205ENST00000567549 AOC2O75106 756 aa23.65■■□□□ 1.38
LINC01238-205ENST00000567549 STRIP1Q5VSL9 837 aa23.65■■□□□ 1.38
LINC01238-205ENST00000567549 RGMBQ6NW40 437 aa23.65■■□□□ 1.38
LINC01238-205ENST00000567549 MYOZ2Q9NPC6 264 aa23.65■■□□□ 1.38
LINC01238-205ENST00000567549 VAMP4O75379 141 aa23.64■■□□□ 1.37
LINC01238-205ENST00000567549 REM2Q8IYK8 340 aaPredicted RBP23.64■■□□□ 1.37
LINC01238-205ENST00000567549 SALL2Q9Y467 1007 aaPredicted RBP23.64■■□□□ 1.37
LINC01238-205ENST00000567549 EXOSC9Q06265 439 aaKnown RBP23.63■■□□□ 1.37
LINC01238-205ENST00000567549 SCARF1Q14162 830 aa23.63■■□□□ 1.37
LINC01238-205ENST00000567549 HDAC9Q9UKV0 1011 aa23.63■■□□□ 1.37
LINC01238-205ENST00000567549 ZNF804BA4D1E1 1349 aa23.62■■□□□ 1.37
LINC01238-205ENST00000567549 ADM5C9JUS6 153 aa23.62■■□□□ 1.37
LINC01238-205ENST00000567549 EGFRP00533 1210 aa23.62■■□□□ 1.37
LINC01238-205ENST00000567549 CSF1RP07333 972 aa23.62■■□□□ 1.37
LINC01238-205ENST00000567549 ZNF157P51786 506 aaPredicted RBP23.62■■□□□ 1.37
LINC01238-205ENST00000567549 IFIT5Q13325 482 aaKnown RBP23.62■■□□□ 1.37
LINC01238-205ENST00000567549 ANGEL2Q5VTE6 544 aaKnown RBP23.62■■□□□ 1.37
LINC01238-205ENST00000567549 FBXW7Q969H0 707 aa23.62■■□□□ 1.37
LINC01238-205ENST00000567549 GMLQ99445 158 aa23.62■■□□□ 1.37
LINC01238-205ENST00000567549 NF2P35240 595 aa23.61■■□□□ 1.37
LINC01238-205ENST00000567549 FAM161AQ3B820 660 aa23.61■■□□□ 1.37
LINC01238-205ENST00000567549 CDCA5Q96FF9 252 aa23.6■■□□□ 1.37
LINC01238-205ENST00000567549 FAM9BQ8IZU0 186 aa23.59■■□□□ 1.37
LINC01238-205ENST00000567549 SAGE1Q9NXZ1 904 aa23.59■■□□□ 1.37
LINC01238-205ENST00000567549 CHMP3Q9Y3E7 222 aa23.59■■□□□ 1.37
LINC01238-205ENST00000567549 CASP7P55210 303 aa23.58■■□□□ 1.37
LINC01238-205ENST00000567549 CCDC57Q2TAC2 916 aa23.58■■□□□ 1.37
LINC01238-205ENST00000567549 TAF7LQ5H9L4 462 aa23.58■■□□□ 1.37
LINC01238-205ENST00000567549 TTLL5Q6EMB2 1281 aa23.58■■□□□ 1.37
LINC01238-205ENST00000567549 C9orf78Q9NZ63 289 aaPredicted RBP23.58■■□□□ 1.37
LINC01238-205ENST00000567549 CHRNDQ07001 517 aa23.57■■□□□ 1.36
LINC01238-205ENST00000567549 DACT2Q5SW24 774 aa23.57■■□□□ 1.36
LINC01238-205ENST00000567549 ABHD8Q96I13 439 aa23.57■■□□□ 1.36
LINC01238-205ENST00000567549 PAPPA2Q9BXP8 1791 aa23.57■■□□□ 1.36
LINC01238-205ENST00000567549 ALDH1L1O75891 902 aa23.56■■□□□ 1.36
LINC01238-205ENST00000567549 BEND3Q5T5X7 828 aa23.56■■□□□ 1.36
LINC01238-205ENST00000567549 ZNF804AQ7Z570 1209 aa23.56■■□□□ 1.36
LINC01238-205ENST00000567549 GRM8O00222 908 aa23.55■■□□□ 1.36
LINC01238-205ENST00000567549 APOBEC3FQ8IUX4 373 aaKnown RBP23.55■■□□□ 1.36
LINC01238-205ENST00000567549 AKAP11Q9UKA4 1901 aa23.55■■□□□ 1.36
LINC01238-205ENST00000567549 SLC10A3P09131 477 aa23.54■■□□□ 1.36
LINC01238-205ENST00000567549 C15orf52Q6ZUT6 534 aaKnown RBP23.54■■□□□ 1.36
LINC01238-205ENST00000567549 SRCIN1Q9C0H9 1055 aa23.54■■□□□ 1.36
LINC01238-205ENST00000567549 FAM155AB1AL88 458 aaPredicted RBP23.53■■□□□ 1.36
LINC01238-205ENST00000567549 F6X3S4 739 aa23.52■■□□□ 1.36
LINC01238-205ENST00000567549 KIF23Q02241 960 aaPredicted RBP23.52■■□□□ 1.36
LINC01238-205ENST00000567549 TTLL12Q14166 644 aaPredicted RBP23.52■■□□□ 1.36
LINC01238-205ENST00000567549 TSKSQ9UJT2 592 aa23.52■■□□□ 1.36
LINC01238-205ENST00000567549 WNT10BO00744 389 aa23.51■■□□□ 1.35
LINC01238-205ENST00000567549 MYO1BO43795 1136 aa23.51■■□□□ 1.35
LINC01238-205ENST00000567549 GTF2IP78347 998 aa23.51■■□□□ 1.35
LINC01238-205ENST00000567549 FOXO4P98177 505 aa23.51■■□□□ 1.35
LINC01238-205ENST00000567549 SLC4A10Q6U841 1118 aa23.51■■□□□ 1.35
LINC01238-205ENST00000567549 LMBR1LQ6UX01 489 aa23.51■■□□□ 1.35
LINC01238-205ENST00000567549 LDHAL6AQ6ZMR3 332 aa23.51■■□□□ 1.35
LINC01238-205ENST00000567549 CD209Q9NNX6 404 aa23.51■■□□□ 1.35
LINC01238-205ENST00000567549 CNNM1Q9NRU3 951 aa23.51■■□□□ 1.35
LINC01238-205ENST00000567549 ASTN2O75129 1339 aaPredicted RBP23.51■■□□□ 1.35
LINC01238-205ENST00000567549 COL1A1P02452 1464 aaPredicted RBP23.5■■□□□ 1.35
LINC01238-205ENST00000567549 NBPF9Q3BBW0 867 aa23.5■■□□□ 1.35
LINC01238-205ENST00000567549 DLK2Q6UY11 383 aa23.5■■□□□ 1.35
LINC01238-205ENST00000567549 TXNRD3Q86VQ6 643 aa23.5■■□□□ 1.35
LINC01238-205ENST00000567549 FKBP1AP62942 108 aaKnown RBP23.49■■□□□ 1.35
LINC01238-205ENST00000567549 ARMC9Q7Z3E5 817 aa23.49■■□□□ 1.35
LINC01238-205ENST00000567549 KIAA0825Q8IV33 1275 aa23.49■■□□□ 1.35
LINC01238-205ENST00000567549 DLGAP5Q15398 846 aa23.48■■□□□ 1.35
LINC01238-205ENST00000567549 CASP8AP2Q9UKL3 1982 aa23.48■■□□□ 1.35
LINC01238-205ENST00000567549 WTIPA6NIX2 430 aaPredicted RBP23.47■■□□□ 1.35
LINC01238-205ENST00000567549 RASAL3Q86YV0 1011 aa23.47■■□□□ 1.35
LINC01238-205ENST00000567549 PPP2R3BQ9Y5P8 575 aa23.47■■□□□ 1.35
LINC01238-205ENST00000567549 ZNF646O15015 1829 aaPredicted RBP23.47■■□□□ 1.35
LINC01238-205ENST00000567549 CCDC85CA6NKD9 419 aa23.46■■□□□ 1.35
LINC01238-205ENST00000567549 E9PSI1 815 aa23.46■■□□□ 1.35
LINC01238-205ENST00000567549 PTPRCP08575 1304 aa23.46■■□□□ 1.35
LINC01238-205ENST00000567549 IL1R1P14778 569 aa23.46■■□□□ 1.35
LINC01238-205ENST00000567549 DGKZQ13574 1117 aa23.46■■□□□ 1.35
LINC01238-205ENST00000567549 SPINK5Q9NQ38 1064 aaPredicted RBP23.46■■□□□ 1.35
LINC01238-205ENST00000567549 TAF5LO75529 589 aa23.45■■□□□ 1.34
LINC01238-205ENST00000567549 TRPA1O75762 1119 aa23.45■■□□□ 1.34
LINC01238-205ENST00000567549 UBE4AQ14139 1066 aa23.45■■□□□ 1.34
LINC01238-205ENST00000567549 MTMR14Q8NCE2 650 aa23.45■■□□□ 1.34
LINC01238-205ENST00000567549 MXD3Q9BW11 206 aa23.45■■□□□ 1.34
LINC01238-205ENST00000567549 RNF186Q9NXI6 227 aa23.45■■□□□ 1.34
LINC01238-205ENST00000567549 SASH1O94885 1247 aa23.44■■□□□ 1.34
LINC01238-205ENST00000567549 KLRK1P26718 216 aa23.44■■□□□ 1.34
LINC01238-205ENST00000567549 HELBQ8NG08 1087 aaPredicted RBP23.44■■□□□ 1.34
LINC01238-205ENST00000567549 CSRNP1Q96S65 589 aa23.44■■□□□ 1.34
LINC01238-205ENST00000567549 ZIC5Q96T25 663 aa23.44■■□□□ 1.34
LINC01238-205ENST00000567549 MCOLN1Q9GZU1 580 aa23.44■■□□□ 1.34
LINC01238-205ENST00000567549 A0A1B0GUL6 1792 aa23.44■■□□□ 1.34
LINC01238-205ENST00000567549 MROH5Q6ZUA9 1318 aa23.43■■□□□ 1.34
LINC01238-205ENST00000567549 SREBF2Q12772 1141 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms