RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 HSP90AA2PQ14568 343 aaPredicted RBP3.75□□□□□ -1.81
CHD9-216ENST00000565803 NOM1Q5C9Z4 860 aaKnown RBP3.75□□□□□ -1.81
CHD9-216ENST00000565803 CCDC174Q6PII3 467 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 CHCHD4Q8N4Q1 142 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 SLC16A10Q8TF71 515 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 MKRN1Q9UHC7 482 aaKnown RBP3.75□□□□□ -1.81
CHD9-216ENST00000565803 GOLGA6L22H0YM25 854 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 ARHGAP33O14559 1287 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 HMGN5P82970 282 aaKnown RBP3.75□□□□□ -1.81
CHD9-216ENST00000565803 MTMR3Q13615 1198 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 ANO1Q5XXA6 986 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 DRC7Q8IY82 874 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 CCDC89Q8N998 374 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 IL17RAQ96F46 866 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 SCYL1Q96KG9 808 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 NOVA2Q9UNW9 492 aaKnown RBP3.75□□□□□ -1.81
CHD9-216ENST00000565803 CCNB3Q8WWL7 1395 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 TSPY2A6NKD2 308 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 SLC26A4O43511 780 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 ATG7O95352 703 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 TSPY3P0CV98 308 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 TSPY8P0CW00 308 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 TSPY1Q01534 308 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 EZH2Q15910 746 aaKnown RBP3.75□□□□□ -1.81
CHD9-216ENST00000565803 VPS37DQ86XT2 251 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 ATRIPQ8WXE1 791 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 RNF34Q969K3 372 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 TRIM44Q96DX7 344 aaPredicted RBP3.75□□□□□ -1.81
CHD9-216ENST00000565803 INO80BQ9C086 356 aaPredicted RBP3.75□□□□□ -1.81
CHD9-216ENST00000565803 VPS9D1Q9Y2B5 631 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 FAM208AQ9UK61 1670 aaKnown RBP3.75□□□□□ -1.81
CHD9-216ENST00000565803 BTAF1O14981 1849 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 TAF1LQ8IZX4 1826 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 HIP1RO75146 1068 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 OATP04181 439 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 CD46P15529 392 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 NFE2L2Q16236 605 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 PPP2R2DQ66LE6 453 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 GGT6Q6P531 493 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 PADI6Q6TGC4 694 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 BANK1Q8NDB2 785 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.74□□□□□ -1.813e-6■■■□□ 18.8
CHD9-216ENST00000565803 MKNK1Q9BUB5 465 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 TOGARAM1Q9Y4F4 1720 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 DICER1Q9UPY3 1922 aaKnown RBP3.74□□□□□ -1.81
CHD9-216ENST00000565803 K7ELQ4 463 aaPredicted RBP3.74□□□□□ -1.81
CHD9-216ENST00000565803 LDHCP07864 332 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 ATP2B4P23634 1241 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 CCDC96Q2M329 555 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 FAM161AQ3B820 660 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 CCDC184Q52MB2 194 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 TTC39BQ5VTQ0 682 aaPredicted RBP3.74□□□□□ -1.81
CHD9-216ENST00000565803 TBC1D9Q6ZT07 1266 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 SDR16C5Q8N3Y7 309 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 MSL3Q8N5Y2 521 aaKnown RBP3.74□□□□□ -1.81
CHD9-216ENST00000565803 CDCA7LQ96GN5 454 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 TMEM134Q9H6X4 195 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 NRBP1Q9UHY1 535 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 THRAP3Q9Y2W1 955 aaKnown RBP3.74□□□□□ -1.81
CHD9-216ENST00000565803 SBF1O95248 1867 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 CPDO75976 1380 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 C5P01031 1676 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 OVOS2A0A0G2JMS6 1433 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 OVOS2A0A0J9YW53 1432 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 OVOS2Q6IE36 1432 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 ZBBXA8MT70 800 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 EXOC5O00471 708 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 TOMM70O94826 608 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 KCTD2Q14681 263 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 ZNF594Q96JF6 807 aaPredicted RBP3.74□□□□□ -1.81
CHD9-216ENST00000565803 IER2Q9BTL4 223 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 RABGEF1Q9UJ41 708 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 PDZRN3Q9UPQ7 1066 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 NUB1Q9Y5A7 615 aa3.74□□□□□ -1.81
CHD9-216ENST00000565803 MAFBQ9Y5Q3 323 aaPredicted RBP3.74□□□□□ -1.81
CHD9-216ENST00000565803 INSRP06213 1382 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 IFIT2P09913 472 aaKnown RBP3.73□□□□□ -1.81
CHD9-216ENST00000565803 SCP2P22307 547 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 ATICP31939 592 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 ZNF76P36508 570 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 TRAPPC10P48553 1259 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 PUS10Q3MIT2 529 aaKnown RBP3.73□□□□□ -1.81
CHD9-216ENST00000565803 DMRTA1Q5VZB9 504 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 SUGP1Q8IWZ8 645 aaKnown RBP3.73□□□□□ -1.81
CHD9-216ENST00000565803 PPM1EQ8WY54 764 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 GCC1Q96CN9 775 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.73□□□□□ -1.81
CHD9-216ENST00000565803 CUEDC1Q9NWM3 386 aaPredicted RBP3.73□□□□□ -1.81
CHD9-216ENST00000565803 KIAA0232Q92628 1395 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 TIAM2Q8IVF5 1701 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 USP19O94966 1318 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 SPATA31E1Q6ZUB1 1445 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 ARFGEF2Q9Y6D5 1785 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 HMMRO75330 724 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 HSD3B2P26439 372 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 GRM1Q13255 1194 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 WASHC4Q2M389 1173 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 LMBRD2Q68DH5 695 aaPredicted RBP3.73□□□□□ -1.81
CHD9-216ENST00000565803 TRIM55Q9BYV6 548 aa3.73□□□□□ -1.81
CHD9-216ENST00000565803 JADE2Q9NQC1 790 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms