RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 H7C1D1 291 aa23.38■■□□□ 1.33
CMTM3-210ENST00000565666 APLP1P51693 650 aa23.38■■□□□ 1.33
CMTM3-210ENST00000565666 MICALL2Q8IY33 904 aa23.38■■□□□ 1.33
CMTM3-210ENST00000565666 DZIP1LQ8IYY4 767 aaKnown RBP23.38■■□□□ 1.33
CMTM3-210ENST00000565666 DPF2Q92785 391 aa23.38■■□□□ 1.33
CMTM3-210ENST00000565666 FBXW7Q969H0 707 aa23.38■■□□□ 1.33
CMTM3-210ENST00000565666 RIPOR2Q9Y4F9 1068 aa23.38■■□□□ 1.33
CMTM3-210ENST00000565666 USP17L3A6NCW0 530 aa23.37■■□□□ 1.33
CMTM3-210ENST00000565666 USP17L4A6NCW7 530 aa23.37■■□□□ 1.33
CMTM3-210ENST00000565666 VIL1P09327 827 aaKnown RBP23.37■■□□□ 1.33
CMTM3-210ENST00000565666 LRRC24Q50LG9 513 aa23.37■■□□□ 1.33
CMTM3-210ENST00000565666 METTL24Q5JXM2 366 aa23.37■■□□□ 1.33
CMTM3-210ENST00000565666 USP17L1Q7RTZ2 530 aa23.37■■□□□ 1.33
CMTM3-210ENST00000565666 RSBN1LQ6PCB5 846 aaPredicted RBP23.36■■□□□ 1.33
CMTM3-210ENST00000565666 ZNF804AQ7Z570 1209 aa23.36■■□□□ 1.33
CMTM3-210ENST00000565666 SHTN1A0MZ66 631 aa23.35■■□□□ 1.33
CMTM3-210ENST00000565666 RFX5P48382 616 aaPredicted RBP23.35■■□□□ 1.33
CMTM3-210ENST00000565666 UBE4AQ14139 1066 aa23.35■■□□□ 1.33
CMTM3-210ENST00000565666 C15orf52Q6ZUT6 534 aaKnown RBP23.35■■□□□ 1.33
CMTM3-210ENST00000565666 GNAI2P04899 355 aa23.34■■□□□ 1.33
CMTM3-210ENST00000565666 PTPN12Q05209 780 aaKnown RBP23.34■■□□□ 1.33
CMTM3-210ENST00000565666 MAP1SQ66K74 1059 aaPredicted RBP23.34■■□□□ 1.33
CMTM3-210ENST00000565666 ITPRIPQ8IWB1 547 aa23.34■■□□□ 1.33
CMTM3-210ENST00000565666 CD209Q9NNX6 404 aa23.34■■□□□ 1.33
CMTM3-210ENST00000565666 RCAN3Q9UKA8 241 aa23.34■■□□□ 1.33
CMTM3-210ENST00000565666 EYA2O00167 538 aa23.33■■□□□ 1.33
CMTM3-210ENST00000565666 AGBL3Q8NEM8 1001 aa23.33■■□□□ 1.33
CMTM3-210ENST00000565666 SIL1Q9H173 461 aa23.33■■□□□ 1.33
CMTM3-210ENST00000565666 IRS2Q9Y4H2 1338 aa23.33■■□□□ 1.32
CMTM3-210ENST00000565666 STRIP1Q5VSL9 837 aa23.32■■□□□ 1.32
CMTM3-210ENST00000565666 CNTROBQ8N137 903 aa23.32■■□□□ 1.32
CMTM3-210ENST00000565666 TRPM4Q8TD43 1214 aa23.32■■□□□ 1.32
CMTM3-210ENST00000565666 YTHDC1Q96MU7 727 aaKnown RBP23.32■■□□□ 1.32
CMTM3-210ENST00000565666 ZNF609O15014 1411 aa23.32■■□□□ 1.32
CMTM3-210ENST00000565666 ZNF646O15015 1829 aaPredicted RBP23.31■■□□□ 1.32
CMTM3-210ENST00000565666 PDE8BO95263 885 aa23.31■■□□□ 1.32
CMTM3-210ENST00000565666 MS4A1P11836 297 aa23.31■■□□□ 1.32
CMTM3-210ENST00000565666 RLBP1P12271 317 aa23.31■■□□□ 1.32
CMTM3-210ENST00000565666 GTF2IP78347 998 aa23.31■■□□□ 1.32
CMTM3-210ENST00000565666 TBC1D10BQ4KMP7 808 aaPredicted RBP23.31■■□□□ 1.32
CMTM3-210ENST00000565666 RBM26Q5T8P6 1007 aaKnown RBP23.31■■□□□ 1.32
CMTM3-210ENST00000565666 TTLL5Q6EMB2 1281 aa23.31■■□□□ 1.32
CMTM3-210ENST00000565666 SAMD7Q7Z3H4 446 aa23.31■■□□□ 1.32
CMTM3-210ENST00000565666 SRGAP3O43295 1099 aa23.3■■□□□ 1.32
CMTM3-210ENST00000565666 DACT2Q5SW24 774 aa23.3■■□□□ 1.32
CMTM3-210ENST00000565666 FBXO3Q9UK99 471 aa23.3■■□□□ 1.32
CMTM3-210ENST00000565666 MYO3BQ8WXR4 1341 aa23.3■■□□□ 1.32
CMTM3-210ENST00000565666 HTRA3P83110 453 aa23.29■■□□□ 1.32
CMTM3-210ENST00000565666 VGLL2Q8N8G2 317 aa23.29■■□□□ 1.32
CMTM3-210ENST00000565666 PANK1Q8TE04 598 aa23.29■■□□□ 1.32
CMTM3-210ENST00000565666 MXD3Q9BW11 206 aa23.29■■□□□ 1.32
CMTM3-210ENST00000565666 PA2G4Q9UQ80 394 aaKnown RBP23.29■■□□□ 1.32
CMTM3-210ENST00000565666 CIAO1O76071 339 aa23.28■■□□□ 1.32
CMTM3-210ENST00000565666 ITGBL1O95965 494 aaPredicted RBP23.28■■□□□ 1.32
CMTM3-210ENST00000565666 USP17L8P0C7I0 530 aa23.28■■□□□ 1.32
CMTM3-210ENST00000565666 IL1R1P14778 569 aa23.28■■□□□ 1.32
CMTM3-210ENST00000565666 HIBADHP31937 336 aaKnown RBP23.28■■□□□ 1.32
CMTM3-210ENST00000565666 GYG1P46976 350 aa23.28■■□□□ 1.32
CMTM3-210ENST00000565666 HIRAP54198 1017 aaPredicted RBP23.28■■□□□ 1.32
CMTM3-210ENST00000565666 MTX1Q13505 466 aa23.28■■□□□ 1.32
CMTM3-210ENST00000565666 KIF4BQ2VIQ3 1234 aa23.28■■□□□ 1.32
CMTM3-210ENST00000565666 VPS37DQ86XT2 251 aa23.28■■□□□ 1.32
CMTM3-210ENST00000565666 GMLQ99445 158 aa23.28■■□□□ 1.32
CMTM3-210ENST00000565666 PASKQ96RG2 1323 aa23.28■■□□□ 1.32
CMTM3-210ENST00000565666 PUM3Q15397 648 aaKnown RBP23.27■■□□□ 1.32
CMTM3-210ENST00000565666 CAVIN4Q5BKX8 364 aa23.27■■□□□ 1.32
CMTM3-210ENST00000565666 ATG9AQ7Z3C6 839 aa23.27■■□□□ 1.32
CMTM3-210ENST00000565666 ZC3H15Q8WU90 426 aaKnown RBP23.27■■□□□ 1.32
CMTM3-210ENST00000565666 COPRSQ9NQ92 184 aa23.27■■□□□ 1.32
CMTM3-210ENST00000565666 IFIT1P09914 478 aaKnown RBP23.26■■□□□ 1.31
CMTM3-210ENST00000565666 OGFOD1Q8N543 542 aa23.26■■□□□ 1.31
CMTM3-210ENST00000565666 FAM84BQ96KN1 310 aaPredicted RBP23.26■■□□□ 1.31
CMTM3-210ENST00000565666 CEP126Q9P2H0 1117 aa23.26■■□□□ 1.31
CMTM3-210ENST00000565666 EGFRP00533 1210 aa23.25■■□□□ 1.31
CMTM3-210ENST00000565666 SLC5A1P13866 664 aa23.25■■□□□ 1.31
CMTM3-210ENST00000565666 IL15P40933 162 aaPredicted RBP23.25■■□□□ 1.31
CMTM3-210ENST00000565666 ZNF280AP59817 542 aaPredicted RBP23.25■■□□□ 1.31
CMTM3-210ENST00000565666 ZBTB7BO15156 539 aaPredicted RBP23.24■■□□□ 1.31
CMTM3-210ENST00000565666 C1orf115Q9H7X2 142 aa23.24■■□□□ 1.31
CMTM3-210ENST00000565666 MYOZ2Q9NPC6 264 aa23.24■■□□□ 1.31
CMTM3-210ENST00000565666 PGAP2Q9UHJ9 254 aa23.24■■□□□ 1.31
CMTM3-210ENST00000565666 JAG2Q9Y219 1238 aa23.24■■□□□ 1.31
CMTM3-210ENST00000565666 FRAT2O75474 233 aaPredicted RBP23.23■■□□□ 1.31
CMTM3-210ENST00000565666 FGFR2P21802 821 aa23.23■■□□□ 1.31
CMTM3-210ENST00000565666 KIAA0825Q8IV33 1275 aa23.23■■□□□ 1.31
CMTM3-210ENST00000565666 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.23■■□□□ 1.31
CMTM3-210ENST00000565666 TDRD7Q8NHU6 1098 aaKnown RBP23.23■■□□□ 1.31
CMTM3-210ENST00000565666 LPIN2Q92539 896 aa23.23■■□□□ 1.31
CMTM3-210ENST00000565666 HDAC9Q9UKV0 1011 aa23.23■■□□□ 1.31
CMTM3-210ENST00000565666 PNMA6EA0A0J9YXQ4 647 aa23.22■■□□□ 1.31
CMTM3-210ENST00000565666 SASH1O94885 1247 aa23.22■■□□□ 1.31
CMTM3-210ENST00000565666 ATP2B3Q16720 1220 aa23.22■■□□□ 1.31
CMTM3-210ENST00000565666 FBXO33Q7Z6M2 555 aa23.22■■□□□ 1.31
CMTM3-210ENST00000565666 DCPSQ96C86 337 aaKnown RBP23.22■■□□□ 1.31
CMTM3-210ENST00000565666 GLIS2Q9BZE0 524 aaPredicted RBP23.22■■□□□ 1.31
CMTM3-210ENST00000565666 CREBZFQ9NS37 354 aa23.22■■□□□ 1.31
CMTM3-210ENST00000565666 TMEM88BA6NKF7 163 aa23.21■■□□□ 1.31
CMTM3-210ENST00000565666 TRAF5O00463 557 aa23.21■■□□□ 1.31
CMTM3-210ENST00000565666 CDC37L1Q7L3B6 337 aa23.21■■□□□ 1.31
CMTM3-210ENST00000565666 IQSEC3Q9UPP2 1182 aaPredicted RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms