RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 DLEC1Q9Y238 1755 aa8.33□□□□□ -1.08
UBFD1-204ENST00000565634 CGNL1Q0VF96 1302 aa8.32□□□□□ -1.08
UBFD1-204ENST00000565634 USP42Q9H9J4 1324 aaKnown RBP8.32□□□□□ -1.08
UBFD1-204ENST00000565634 ANKRD31Q8N7Z5 1873 aa8.32□□□□□ -1.08
UBFD1-204ENST00000565634 H0YIN7 160 aa8.32□□□□□ -1.08
UBFD1-204ENST00000565634 TRAF5O00463 557 aa8.32□□□□□ -1.08
UBFD1-204ENST00000565634 PPM1GO15355 546 aaPredicted RBP8.32□□□□□ -1.08
UBFD1-204ENST00000565634 SERPINB2P05120 415 aa8.32□□□□□ -1.08
UBFD1-204ENST00000565634 CCDC184Q52MB2 194 aa8.32□□□□□ -1.08
UBFD1-204ENST00000565634 PRPF38BQ5VTL8 546 aaKnown RBP8.32□□□□□ -1.08
UBFD1-204ENST00000565634 PTCRAQ6ISU1 281 aaPredicted RBP8.32□□□□□ -1.08
UBFD1-204ENST00000565634 C1orf115Q9H7X2 142 aa8.32□□□□□ -1.08
UBFD1-204ENST00000565634 CARMIL3Q8ND23 1372 aa8.32□□□□□ -1.08
UBFD1-204ENST00000565634 CST9Q5W186 159 aa8.31□□□□□ -1.08
UBFD1-204ENST00000565634 OLFM4Q6UX06 510 aa8.31□□□□□ -1.08
UBFD1-204ENST00000565634 ATP13A2Q9NQ11 1180 aa8.31□□□□□ -1.08
UBFD1-204ENST00000565634 KNSTRNQ9Y448 316 aa8.31□□□□□ -1.08
UBFD1-204ENST00000565634 RNF123Q5XPI4 1314 aa8.3□□□□□ -1.08
UBFD1-204ENST00000565634 ZNF541Q9H0D2 1346 aa8.3□□□□□ -1.08
UBFD1-204ENST00000565634 SNRPBP14678 240 aaKnown RBP8.3□□□□□ -1.08
UBFD1-204ENST00000565634 PHKG2P15735 406 aa8.3□□□□□ -1.08
UBFD1-204ENST00000565634 EPHX2P34913 555 aa8.3□□□□□ -1.08
UBFD1-204ENST00000565634 WNT7BP56706 349 aa8.3□□□□□ -1.08
UBFD1-204ENST00000565634 CIAPIN1Q6FI81 312 aa8.3□□□□□ -1.08
UBFD1-204ENST00000565634 INTS5Q6P9B9 1019 aaKnown RBP8.3□□□□□ -1.08
UBFD1-204ENST00000565634 NUTM1Q86Y26 1132 aa8.3□□□□□ -1.08
UBFD1-204ENST00000565634 ARID3AQ99856 593 aa8.3□□□□□ -1.08
UBFD1-204ENST00000565634 DDX21Q9NR30 783 aaKnown RBP eCLIP8.3□□□□□ -1.08
UBFD1-204ENST00000565634 SPG7Q9UQ90 795 aa8.3□□□□□ -1.08
UBFD1-204ENST00000565634 CNTNAP4Q9C0A0 1308 aa8.29□□□□□ -1.08
UBFD1-204ENST00000565634 EDC4Q6P2E9 1401 aaKnown RBP8.29□□□□□ -1.08
UBFD1-204ENST00000565634 LTBP1Q14766 1721 aa8.29□□□□□ -1.08
UBFD1-204ENST00000565634 NFX1Q12986 1120 aaKnown RBP8.29□□□□□ -1.08
UBFD1-204ENST00000565634 RETREG3Q86VR2 466 aa8.29□□□□□ -1.08
UBFD1-204ENST00000565634 IFNL2Q8IZJ0 200 aa8.29□□□□□ -1.08
UBFD1-204ENST00000565634 FAM117AQ9C073 453 aa8.29□□□□□ -1.08
UBFD1-204ENST00000565634 RSPH6AQ9H0K4 717 aa8.29□□□□□ -1.08
UBFD1-204ENST00000565634 HACL1Q9UJ83 578 aa8.29□□□□□ -1.08
UBFD1-204ENST00000565634 EMILIN1Q9Y6C2 1016 aa8.29□□□□□ -1.08
UBFD1-204ENST00000565634 KDRP35968 1356 aa8.29□□□□□ -1.08
UBFD1-204ENST00000565634 AKAP11Q9UKA4 1901 aa8.29□□□□□ -1.08
UBFD1-204ENST00000565634 ADAMTS7Q9UKP4 1686 aa8.28□□□□□ -1.08
UBFD1-204ENST00000565634 IQCA1LA6NCM1 817 aa8.28□□□□□ -1.08
UBFD1-204ENST00000565634 DLL1O00548 723 aa8.28□□□□□ -1.08
UBFD1-204ENST00000565634 FDX1P10109 184 aa8.28□□□□□ -1.08
UBFD1-204ENST00000565634 SSTR3P32745 418 aaPredicted RBP8.28□□□□□ -1.08
UBFD1-204ENST00000565634 HABP4Q5JVS0 413 aaKnown RBP8.28□□□□□ -1.08
UBFD1-204ENST00000565634 DIEXFQ68CQ4 756 aaKnown RBP8.28□□□□□ -1.08
UBFD1-204ENST00000565634 DLK2Q6UY11 383 aa8.28□□□□□ -1.08
UBFD1-204ENST00000565634 MORC1Q86VD1 984 aa8.28□□□□□ -1.08
UBFD1-204ENST00000565634 DNAJC10Q8IXB1 793 aa8.28□□□□□ -1.08
UBFD1-204ENST00000565634 TAOK3Q9H2K8 898 aa8.28□□□□□ -1.08
UBFD1-204ENST00000565634 ZNF277Q9NRM2 450 aaPredicted RBP8.28□□□□□ -1.08
UBFD1-204ENST00000565634 KIF20BQ96Q89 1820 aa8.28□□□□□ -1.08
UBFD1-204ENST00000565634 COL11A2P13942 1736 aaPredicted RBP8.27□□□□□ -1.09
UBFD1-204ENST00000565634 SIAH2O43255 324 aa8.27□□□□□ -1.09
UBFD1-204ENST00000565634 WFS1O76024 890 aa8.27□□□□□ -1.09
UBFD1-204ENST00000565634 ECE1P42892 770 aa8.27□□□□□ -1.09
UBFD1-204ENST00000565634 CABP4P57796 275 aa8.27□□□□□ -1.09
UBFD1-204ENST00000565634 NFATC2IPQ8NCF5 419 aa8.27□□□□□ -1.09
UBFD1-204ENST00000565634 SPIRE2Q8WWL2 714 aa8.27□□□□□ -1.09
UBFD1-204ENST00000565634 NUDT12Q9BQG2 462 aa8.27□□□□□ -1.09
UBFD1-204ENST00000565634 POLKQ9UBT6 870 aa8.27□□□□□ -1.09
UBFD1-204ENST00000565634 GJA3Q9Y6H8 435 aa8.27□□□□□ -1.09
UBFD1-204ENST00000565634 ADAMTSL1Q8N6G6 1762 aa8.27□□□□□ -1.09
UBFD1-204ENST00000565634 NRXN2Q9P2S2 1712 aa8.26□□□□□ -1.09
UBFD1-204ENST00000565634 NDUFV2P19404 249 aa8.26□□□□□ -1.09
UBFD1-204ENST00000565634 PPP2R1AP30153 589 aa8.26□□□□□ -1.09
UBFD1-204ENST00000565634 EPS15P42566 896 aa8.26□□□□□ -1.09
UBFD1-204ENST00000565634 LCE2CQ5TA81 110 aa8.26□□□□□ -1.09
UBFD1-204ENST00000565634 SYNE4Q8N205 404 aa8.26□□□□□ -1.09
UBFD1-204ENST00000565634 PRKRIP1Q9H875 184 aaPredicted RBP8.26□□□□□ -1.09
UBFD1-204ENST00000565634 ZNF408Q9H9D4 720 aa8.26□□□□□ -1.09
UBFD1-204ENST00000565634 SMG6Q86US8 1419 aaKnown RBP8.26□□□□□ -1.09
UBFD1-204ENST00000565634 C6orf229H3BNL8 230 aa8.25□□□□□ -1.09
UBFD1-204ENST00000565634 ALDH1A1P00352 501 aa8.25□□□□□ -1.09
UBFD1-204ENST00000565634 MTHFSP49914 203 aa8.25□□□□□ -1.09
UBFD1-204ENST00000565634 TBC1D9BQ66K14 1250 aa8.25□□□□□ -1.09
UBFD1-204ENST00000565634 TRIM47Q96LD4 638 aa8.25□□□□□ -1.09
UBFD1-204ENST00000565634 TJP1Q07157 1748 aa8.25□□□□□ -1.09
UBFD1-204ENST00000565634 INSRP06213 1382 aa8.24□□□□□ -1.09
UBFD1-204ENST00000565634 MOXD2PA6NHM9 499 aa8.24□□□□□ -1.09
UBFD1-204ENST00000565634 CANXP27824 592 aaKnown RBP8.24□□□□□ -1.09
UBFD1-204ENST00000565634 MAP2K2P36507 400 aa8.24□□□□□ -1.09
UBFD1-204ENST00000565634 SLC39A6Q13433 755 aa8.24□□□□□ -1.09
UBFD1-204ENST00000565634 NARFQ9UHQ1 456 aa8.24□□□□□ -1.09
UBFD1-204ENST00000565634 TLL2Q9Y6L7 1015 aa8.24□□□□□ -1.09
UBFD1-204ENST00000565634 ANKRD26Q9UPS8 1709 aa8.23□□□□□ -1.09
UBFD1-204ENST00000565634 TRPA1O75762 1119 aa8.23□□□□□ -1.09
UBFD1-204ENST00000565634 CELF2O95319 508 aaKnown RBP8.23□□□□□ -1.09
UBFD1-204ENST00000565634 SH3BP2P78314 561 aa8.23□□□□□ -1.09
UBFD1-204ENST00000565634 PRPF40BQ6NWY9 871 aaKnown RBP8.23□□□□□ -1.09
UBFD1-204ENST00000565634 SLC51AQ86UW1 340 aa8.23□□□□□ -1.09
UBFD1-204ENST00000565634 ZBTB1Q9Y2K1 713 aa8.23□□□□□ -1.09
UBFD1-204ENST00000565634 ZNF330Q9Y3S2 320 aaPredicted RBP8.23□□□□□ -1.09
UBFD1-204ENST00000565634 KIAA0100Q14667 2235 aaKnown RBP8.23□□□□□ -1.09
UBFD1-204ENST00000565634 NPC1L1Q9UHC9 1359 aa8.22□□□□□ -1.09
UBFD1-204ENST00000565634 THSD7BQ9C0I4 1608 aa8.22□□□□□ -1.09
UBFD1-204ENST00000565634 ZNF831Q5JPB2 1677 aa8.22□□□□□ -1.09
UBFD1-204ENST00000565634 ERVV-2B6SEH9 535 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms