RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 USP17L1Q7RTZ2 530 aa23.03■■□□□ 1.28
SYNGR3-204ENST00000564642 TXNRD3Q86VQ6 643 aa23.03■■□□□ 1.28
SYNGR3-204ENST00000564642 ANKRD44Q8N8A2 993 aa23.03■■□□□ 1.28
SYNGR3-204ENST00000564642 FRAT1Q92837 279 aaPredicted RBP23.03■■□□□ 1.28
SYNGR3-204ENST00000564642 A0A1B0GUL6 1792 aa23.02■■□□□ 1.28
SYNGR3-204ENST00000564642 SHTN1A0MZ66 631 aa23.02■■□□□ 1.28
SYNGR3-204ENST00000564642 UBTFL1P0CB47 393 aaPredicted RBP23.02■■□□□ 1.28
SYNGR3-204ENST00000564642 RSBN1LQ6PCB5 846 aaPredicted RBP23.02■■□□□ 1.28
SYNGR3-204ENST00000564642 HDAC5Q9UQL6 1122 aa23.02■■□□□ 1.28
SYNGR3-204ENST00000564642 AGBL3Q8NEM8 1001 aa23.01■■□□□ 1.27
SYNGR3-204ENST00000564642 FBXW7Q969H0 707 aa23.01■■□□□ 1.27
SYNGR3-204ENST00000564642 CREBZFQ9NS37 354 aa23.01■■□□□ 1.27
SYNGR3-204ENST00000564642 SNAP23O00161 211 aa23■■□□□ 1.27
SYNGR3-204ENST00000564642 KLRK1P26718 216 aa23■■□□□ 1.27
SYNGR3-204ENST00000564642 RBM26Q5T8P6 1007 aaKnown RBP23■■□□□ 1.27
SYNGR3-204ENST00000564642 SAMD7Q7Z3H4 446 aa23■■□□□ 1.27
SYNGR3-204ENST00000564642 TRPM4Q8TD43 1214 aa23■■□□□ 1.27
SYNGR3-204ENST00000564642 ZC3H15Q8WU90 426 aaKnown RBP23■■□□□ 1.27
SYNGR3-204ENST00000564642 PUS3Q9BZE2 481 aaKnown RBP23■■□□□ 1.27
SYNGR3-204ENST00000564642 HIRAP54198 1017 aaPredicted RBP22.99■■□□□ 1.27
SYNGR3-204ENST00000564642 TBC1D10BQ4KMP7 808 aaPredicted RBP22.99■■□□□ 1.27
SYNGR3-204ENST00000564642 ATF7IPQ6VMQ6 1270 aa22.99■■□□□ 1.27
SYNGR3-204ENST00000564642 TMEM88BA6NKF7 163 aa22.98■■□□□ 1.27
SYNGR3-204ENST00000564642 INTS3Q68E01 1043 aaKnown RBP22.98■■□□□ 1.27
SYNGR3-204ENST00000564642 C15orf52Q6ZUT6 534 aaKnown RBP22.98■■□□□ 1.27
SYNGR3-204ENST00000564642 PGAP2Q9UHJ9 254 aa22.98■■□□□ 1.27
SYNGR3-204ENST00000564642 RIPOR2Q9Y4F9 1068 aa22.98■■□□□ 1.27
SYNGR3-204ENST00000564642 MROH5Q6ZUA9 1318 aa22.98■■□□□ 1.27
SYNGR3-204ENST00000564642 STRIP1Q5VSL9 837 aa22.97■■□□□ 1.27
SYNGR3-204ENST00000564642 TTLL5Q6EMB2 1281 aa22.97■■□□□ 1.27
SYNGR3-204ENST00000564642 ZNF804AQ7Z570 1209 aa22.97■■□□□ 1.27
SYNGR3-204ENST00000564642 CD209Q9NNX6 404 aa22.97■■□□□ 1.27
SYNGR3-204ENST00000564642 PCNTO95613 3336 aa22.96■■□□□ 1.27
SYNGR3-204ENST00000564642 USP17L8P0C7I0 530 aa22.96■■□□□ 1.27
SYNGR3-204ENST00000564642 TRIM27P14373 513 aa22.96■■□□□ 1.27
SYNGR3-204ENST00000564642 UBE4AQ14139 1066 aa22.96■■□□□ 1.27
SYNGR3-204ENST00000564642 KIF4BQ2VIQ3 1234 aa22.96■■□□□ 1.27
SYNGR3-204ENST00000564642 ZNF609O15014 1411 aa22.95■■□□□ 1.26
SYNGR3-204ENST00000564642 LRRC24Q50LG9 513 aa22.95■■□□□ 1.26
SYNGR3-204ENST00000564642 METTL24Q5JXM2 366 aa22.95■■□□□ 1.26
SYNGR3-204ENST00000564642 DACT2Q5SW24 774 aa22.95■■□□□ 1.26
SYNGR3-204ENST00000564642 ZKSCAN2Q63HK3 967 aa22.95■■□□□ 1.26
SYNGR3-204ENST00000564642 KLHDC4Q8TBB5 520 aa22.95■■□□□ 1.26
SYNGR3-204ENST00000564642 MYO3BQ8WXR4 1341 aa22.95■■□□□ 1.26
SYNGR3-204ENST00000564642 CLUAP1Q96AJ1 413 aa22.95■■□□□ 1.26
SYNGR3-204ENST00000564642 GMLQ99445 158 aa22.95■■□□□ 1.26
SYNGR3-204ENST00000564642 TRPM7Q96QT4 1865 aa22.94■■□□□ 1.26
SYNGR3-204ENST00000564642 IRS2Q9Y4H2 1338 aa22.94■■□□□ 1.26
SYNGR3-204ENST00000564642 EGFRP00533 1210 aa22.94■■□□□ 1.26
SYNGR3-204ENST00000564642 GNAI3P08754 354 aa22.94■■□□□ 1.26
SYNGR3-204ENST00000564642 ZNF280AP59817 542 aaPredicted RBP22.94■■□□□ 1.26
SYNGR3-204ENST00000564642 GTF2IP78347 998 aa22.94■■□□□ 1.26
SYNGR3-204ENST00000564642 CDC37L1Q7L3B6 337 aa22.94■■□□□ 1.26
SYNGR3-204ENST00000564642 MEIS3Q99687 375 aa22.94■■□□□ 1.26
SYNGR3-204ENST00000564642 LRRFIP2Q9Y608 721 aaKnown RBP22.94■■□□□ 1.26
SYNGR3-204ENST00000564642 POLR2AP24928 1970 aaKnown RBP22.93■■□□□ 1.26
SYNGR3-204ENST00000564642 TRAF5O00463 557 aa22.93■■□□□ 1.26
SYNGR3-204ENST00000564642 OGFOD1Q8N543 542 aa22.93■■□□□ 1.26
SYNGR3-204ENST00000564642 DCPSQ96C86 337 aaKnown RBP22.93■■□□□ 1.26
SYNGR3-204ENST00000564642 MXD3Q9BW11 206 aa22.93■■□□□ 1.26
SYNGR3-204ENST00000564642 GLIS2Q9BZE0 524 aaPredicted RBP22.93■■□□□ 1.26
SYNGR3-204ENST00000564642 FMR1Q06787 632 aaKnown RBP eCLIP22.92■■□□□ 1.26
SYNGR3-204ENST00000564642 MKRN1Q9UHC7 482 aaKnown RBP22.92■■□□□ 1.26
SYNGR3-204ENST00000564642 TNNQ9UQP3 1299 aa22.92■■□□□ 1.26
SYNGR3-204ENST00000564642 IL1R1P14778 569 aa22.91■■□□□ 1.26
SYNGR3-204ENST00000564642 RFX5P48382 616 aaPredicted RBP22.91■■□□□ 1.26
SYNGR3-204ENST00000564642 MYOZ2Q9NPC6 264 aa22.91■■□□□ 1.26
SYNGR3-204ENST00000564642 ABT1Q9ULW3 272 aaKnown RBP22.91■■□□□ 1.26
SYNGR3-204ENST00000564642 ZNF646O15015 1829 aaPredicted RBP22.91■■□□□ 1.26
SYNGR3-204ENST00000564642 EYA2O00167 538 aa22.9■■□□□ 1.26
SYNGR3-204ENST00000564642 PDE8BO95263 885 aa22.9■■□□□ 1.26
SYNGR3-204ENST00000564642 HIBADHP31937 336 aaKnown RBP22.9■■□□□ 1.26
SYNGR3-204ENST00000564642 PTPN12Q05209 780 aaKnown RBP22.9■■□□□ 1.26
SYNGR3-204ENST00000564642 USP48Q86UV5 1035 aa22.9■■□□□ 1.26
SYNGR3-204ENST00000564642 HDAC9Q9UKV0 1011 aa22.9■■□□□ 1.26
SYNGR3-204ENST00000564642 GYG1P46976 350 aa22.89■■□□□ 1.25
SYNGR3-204ENST00000564642 MMP14P50281 582 aa22.89■■□□□ 1.25
SYNGR3-204ENST00000564642 SCARF1Q14162 830 aa22.89■■□□□ 1.25
SYNGR3-204ENST00000564642 KRT26Q7Z3Y9 468 aa22.89■■□□□ 1.25
SYNGR3-204ENST00000564642 HSPA1AP0DMV8 641 aaKnown RBP22.88■■□□□ 1.25
SYNGR3-204ENST00000564642 HSPA1BP0DMV9 641 aaKnown RBP22.88■■□□□ 1.25
SYNGR3-204ENST00000564642 CAVIN4Q5BKX8 364 aa22.88■■□□□ 1.25
SYNGR3-204ENST00000564642 CST9Q5W186 159 aa22.88■■□□□ 1.25
SYNGR3-204ENST00000564642 VPS37DQ86XT2 251 aa22.88■■□□□ 1.25
SYNGR3-204ENST00000564642 KIAA0825Q8IV33 1275 aa22.88■■□□□ 1.25
SYNGR3-204ENST00000564642 FTSJ3Q8IY81 847 aaKnown RBP22.88■■□□□ 1.25
SYNGR3-204ENST00000564642 ZNF408Q9H9D4 720 aa22.88■■□□□ 1.25
SYNGR3-204ENST00000564642 FBXO3Q9UK99 471 aa22.88■■□□□ 1.25
SYNGR3-204ENST00000564642 CNTNAP1P78357 1384 aa22.88■■□□□ 1.25
SYNGR3-204ENST00000564642 SASH1O94885 1247 aa22.87■■□□□ 1.25
SYNGR3-204ENST00000564642 CELF2O95319 508 aaKnown RBP22.87■■□□□ 1.25
SYNGR3-204ENST00000564642 DEFB115Q30KQ5 88 aa22.87■■□□□ 1.25
SYNGR3-204ENST00000564642 TMEM57Q8N5G2 664 aa22.87■■□□□ 1.25
SYNGR3-204ENST00000564642 VGLL2Q8N8G2 317 aa22.87■■□□□ 1.25
SYNGR3-204ENST00000564642 FAM84BQ96KN1 310 aaPredicted RBP22.87■■□□□ 1.25
SYNGR3-204ENST00000564642 SIL1Q9H173 461 aa22.87■■□□□ 1.25
SYNGR3-204ENST00000564642 GGA3Q9NZ52 723 aa22.87■■□□□ 1.25
SYNGR3-204ENST00000564642 PUM3Q15397 648 aaKnown RBP22.86■■□□□ 1.25
SYNGR3-204ENST00000564642 SULF1Q8IWU6 871 aa22.86■■□□□ 1.25
SYNGR3-204ENST00000564642 TDRD7Q8NHU6 1098 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms