RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	SARM1	Q6SZW1	724 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	KIF4A	O95239	1232 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	LRRC45	Q96CN5	670 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	DDX58	O95786	925 aa	Known RBP	4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	BRAP	Q7Z569	592 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	NSRP1	Q9H0G5	558 aa	Known RBP	4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	APOBR	Q0VD83	1088 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	TMED1	Q13445	227 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	TSGA10	Q9BZW7	698 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	C3orf20	Q8ND61	904 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	GCFC2	P16383	781 aa	Known RBP	4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	CYLC1	P35663	651 aa	Predicted RBP	4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	TMEM63C	Q9P1W3	806 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	THEG	Q9P2T0	379 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	PFDN1	O60925	122 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	TRIM27	P14373	513 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	NUTM2D	Q5VT03	806 aa	Predicted RBP	4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	NUTM2A	Q8IVF1	878 aa	Predicted RBP	4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	ABCC1	P33527	1531 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	WASHC4	Q2M389	1173 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	ZNF569	Q5MCW4	686 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	TMC6	Q7Z403	805 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	CCDC26	Q8TAB7	109 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	RAD51AP2	Q09MP3	1159 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	MAGEC3	Q8TD91	643 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	TSNAXIP1	Q2TAA8	658 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	TACC1	O75410	805 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	ZNF365	Q70YC5	407 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	KCND1	Q9NSA2	647 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	PPP2R5B	Q15173	497 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	LONRF2	Q1L5Z9	754 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	GLE1	Q53GS7	698 aa	Known RBP	4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	ESYT1	Q9BSJ8	1104 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	RCOR1	Q9UKL0	485 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	KDM5B	Q9UGL1	1544 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	TTC21B	Q7Z4L5	1316 aa		4.83	□□□□□ -1.64
MACF1-231	ENST00000564288	TTC19	Q6DKK2	380 aa	Predicted RBP	4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	KRT86	O43790	486 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	MXRA7	P84157	204 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	SRGAP1	Q7Z6B7	1085 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	CETN2	P41208	172 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	KMT5B	Q4FZB7	885 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	A1CF	Q9NQ94	594 aa	Known RBP	4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	ARHGEF10	O15013	1369 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	BCAS4	Q8TDM0	211 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	FAN1	Q9Y2M0	1017 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	FAM177B	A6PVY3	158 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	GIGYF1	O75420	1035 aa	Predicted RBP	4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	ATP8B2	P98198	1209 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	FBXO41	Q8TF61	875 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	PDE11A	Q9HCR9	933 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	SPATA31E1	Q6ZUB1	1445 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	BIRC2	Q13490	618 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	MAATS1	Q7Z4T9	603 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	PHLDB2	Q86SQ0	1253 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	TADA2B	Q86TJ2	420 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	KIAA0753	Q2KHM9	967 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	UIMC1	Q96RL1	719 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	TSKS	Q9UJT2	592 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	ZNF644	Q9H582	1327 aa	Predicted RBP	4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	COL17A1	Q9UMD9	1497 aa	Predicted RBP	4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	UBTFL1	P0CB47	393 aa	Predicted RBP	4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	AMPD3	Q01432	767 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	SART3	Q15020	963 aa	Known RBP	4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	VPS36	Q86VN1	386 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	ZMAT2	Q96NC0	199 aa	Known RBP	4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	POLR1A	O95602	1720 aa	Predicted RBP	4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	MICAL1	Q8TDZ2	1067 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	ZCCHC17	Q9NP64	241 aa	Known RBP	4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	ORC3	Q9UBD5	711 aa	Predicted RBP	4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	GOLGA6B	A6NDN3	693 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	TMEM87A	Q8NBN3	555 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	HOXB7	P09629	217 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	MRPS25	P82663	173 aa	Known RBP	4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	NCBP1	Q09161	790 aa	Known RBP	4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	RMDN2	Q96LZ7	410 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	DAAM1	Q9Y4D1	1078 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	GSC	P56915	257 aa	Predicted RBP	4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	ELF2	Q15723	593 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	CCDC12	Q8WUD4	166 aa	Predicted RBP	4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	EVI5L	Q96CN4	794 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	NAP1L3	Q99457	506 aa	Predicted RBP	4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	TMX1	Q9H3N1	280 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	GPT2	Q8TD30	523 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	SMC1B	Q8NDV3	1235 aa		4.82	□□□□□ -1.64
MACF1-231	ENST00000564288	RASSF10	A6NK89	507 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	WWC2	Q6AWC2	1192 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	TDRD7	Q8NHU6	1098 aa	Known RBP	4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	WDHD1	O75717	1129 aa	Predicted RBP	4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	SMARCC2	Q8TAQ2	1214 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	JAKMIP2	Q96AA8	810 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	SATB2	Q9UPW6	733 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	CYP26C1	Q6V0L0	522 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288		E7ENQ6	273 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	NDUFA13	Q9P0J0	144 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	CDK13	Q14004	1512 aa	Known RBP	4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	F13A1	P00488	732 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	LMNA	P02545	664 aa	Known RBP	4.81	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms