RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 NBPF26B4DH59 902 aa25.53■■□□□ 1.68
LINC00565-201ENST00000562710 CTIFO43310 598 aaKnown RBP25.53■■□□□ 1.68
LINC00565-201ENST00000562710 SNW1Q13573 536 aaKnown RBP25.53■■□□□ 1.68
LINC00565-201ENST00000562710 STX1AQ16623 288 aa25.53■■□□□ 1.68
LINC00565-201ENST00000562710 NBPF14Q5TI25 921 aa25.53■■□□□ 1.68
LINC00565-201ENST00000562710 NBPF10Q6P3W6 841 aaKnown RBP25.53■■□□□ 1.68
LINC00565-201ENST00000562710 SARM1Q6SZW1 724 aa25.53■■□□□ 1.68
LINC00565-201ENST00000562710 C11orf57Q6ZUT1 292 aaPredicted RBP25.53■■□□□ 1.68
LINC00565-201ENST00000562710 NBPF15Q8N660 670 aa25.53■■□□□ 1.68
LINC00565-201ENST00000562710 PKNOX2Q96KN3 472 aa25.53■■□□□ 1.68
LINC00565-201ENST00000562710 ZNF396Q96N95 335 aaPredicted RBP25.53■■□□□ 1.68
LINC00565-201ENST00000562710 NCOA5Q9HCD5 579 aaKnown RBP25.53■■□□□ 1.68
LINC00565-201ENST00000562710 CCDC73Q6ZRK6 1079 aa25.52■■□□□ 1.68
LINC00565-201ENST00000562710 CWC25Q9NXE8 425 aaPredicted RBP25.52■■□□□ 1.68
LINC00565-201ENST00000562710 MAST3O60307 1309 aa25.52■■□□□ 1.68
LINC00565-201ENST00000562710 CACTINQ8WUQ7 758 aaKnown RBP25.52■■□□□ 1.68
LINC00565-201ENST00000562710 ZNF274Q96GC6 653 aaPredicted RBP25.52■■□□□ 1.68
LINC00565-201ENST00000562710 TMEM94Q12767 1356 aa25.51■■□□□ 1.67
LINC00565-201ENST00000562710 PDIA3P30101 505 aaKnown RBP25.51■■□□□ 1.67
LINC00565-201ENST00000562710 CCDC144BQ3MJ40 725 aa25.51■■□□□ 1.67
LINC00565-201ENST00000562710 CCDC144CPQ8IYA2 1237 aa25.51■■□□□ 1.67
LINC00565-201ENST00000562710 RNF113AO15541 343 aaKnown RBP25.51■■□□□ 1.67
LINC00565-201ENST00000562710 SMAP1Q8IYB5 467 aaPredicted RBP25.51■■□□□ 1.67
LINC00565-201ENST00000562710 ENGASEQ8NFI3 743 aa25.51■■□□□ 1.67
LINC00565-201ENST00000562710 ADAMTSL3P82987 1691 aa25.5■■□□□ 1.67
LINC00565-201ENST00000562710 IFIT1P09914 478 aaKnown RBP25.5■■□□□ 1.67
LINC00565-201ENST00000562710 CHRNA2Q15822 529 aa25.5■■□□□ 1.67
LINC00565-201ENST00000562710 LRRC24Q50LG9 513 aa25.5■■□□□ 1.67
LINC00565-201ENST00000562710 TTLL7Q6ZT98 887 aa25.5■■□□□ 1.67
LINC00565-201ENST00000562710 DDX17Q92841 729 aaKnown RBP25.5■■□□□ 1.67
LINC00565-201ENST00000562710 C16orf45Q96MC5 204 aaPredicted RBP25.5■■□□□ 1.67
LINC00565-201ENST00000562710 NAP1L2Q9ULW6 460 aaPredicted RBP25.5■■□□□ 1.67
LINC00565-201ENST00000562710 EYA2O00167 538 aa25.49■■□□□ 1.67
LINC00565-201ENST00000562710 KINO60870 393 aaKnown RBP25.49■■□□□ 1.67
LINC00565-201ENST00000562710 FAM160A1Q05DH4 1040 aa25.49■■□□□ 1.67
LINC00565-201ENST00000562710 CABLES1Q8TDN4 633 aa25.49■■□□□ 1.67
LINC00565-201ENST00000562710 TJP1Q07157 1748 aa25.49■■□□□ 1.67
LINC00565-201ENST00000562710 ILDR1Q86SU0 546 aaPredicted RBP25.49■■□□□ 1.67
LINC00565-201ENST00000562710 MRFAP1L1Q96HT8 127 aa25.49■■□□□ 1.67
LINC00565-201ENST00000562710 NUP188Q5SRE5 1749 aa25.49■■□□□ 1.67
LINC00565-201ENST00000562710 SPEF2Q9C093 1822 aa25.49■■□□□ 1.67
LINC00565-201ENST00000562710 CHST3Q7LGC8 479 aa25.48■■□□□ 1.67
LINC00565-201ENST00000562710 ANKRD7Q92527 254 aa25.48■■□□□ 1.67
LINC00565-201ENST00000562710 CHMP4CQ96CF2 233 aa25.48■■□□□ 1.67
LINC00565-201ENST00000562710 A0A1B0GUL7 405 aa25.48■■□□□ 1.67
LINC00565-201ENST00000562710 GUCY1B3Q02153 619 aa25.48■■□□□ 1.67
LINC00565-201ENST00000562710 ZNF594Q96JF6 807 aaPredicted RBP25.48■■□□□ 1.67
LINC00565-201ENST00000562710 CARMIL3Q8ND23 1372 aa25.48■■□□□ 1.67
LINC00565-201ENST00000562710 PPFIA3O75145 1194 aa25.47■■□□□ 1.67
LINC00565-201ENST00000562710 ME1P48163 572 aa25.47■■□□□ 1.67
LINC00565-201ENST00000562710 M0R2C6 588 aa25.47■■□□□ 1.67
LINC00565-201ENST00000562710 PPP4R3BQ5MIZ7 849 aa25.47■■□□□ 1.67
LINC00565-201ENST00000562710 FBXL16Q8N461 479 aa25.47■■□□□ 1.67
LINC00565-201ENST00000562710 PARP4Q9UKK3 1724 aaKnown RBP25.46■■□□□ 1.67
LINC00565-201ENST00000562710 TNNT1P13805 278 aa25.46■■□□□ 1.67
LINC00565-201ENST00000562710 LRRC8AQ8IWT6 810 aa25.46■■□□□ 1.67
LINC00565-201ENST00000562710 PDCL2Q8N4E4 241 aa25.46■■□□□ 1.67
LINC00565-201ENST00000562710 FSIP1Q8NA03 581 aa25.46■■□□□ 1.67
LINC00565-201ENST00000562710 ANO10Q9NW15 660 aa25.46■■□□□ 1.67
LINC00565-201ENST00000562710 SMTNL1A8MU46 457 aa25.46■■□□□ 1.67
LINC00565-201ENST00000562710 BECN2A8MW95 431 aa25.46■■□□□ 1.67
LINC00565-201ENST00000562710 CIAO1O76071 339 aa25.46■■□□□ 1.67
LINC00565-201ENST00000562710 TTLL5Q6EMB2 1281 aa25.46■■□□□ 1.67
LINC00565-201ENST00000562710 CCDC191Q8NCU4 936 aa25.46■■□□□ 1.67
LINC00565-201ENST00000562710 FDPSP14324 419 aaKnown RBP25.45■■□□□ 1.66
LINC00565-201ENST00000562710 EVCP57679 992 aa25.45■■□□□ 1.66
LINC00565-201ENST00000562710 DHX40Q8IX18 779 aaKnown RBP25.45■■□□□ 1.66
LINC00565-201ENST00000562710 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.45■■□□□ 1.66
LINC00565-201ENST00000562710 ATG3Q9NT62 314 aa25.45■■□□□ 1.66
LINC00565-201ENST00000562710 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.45■■□□□ 1.66
LINC00565-201ENST00000562710 OSBP2Q969R2 916 aa25.45■■□□□ 1.66
LINC00565-201ENST00000562710 NEMFO60524 1076 aa25.43■■□□□ 1.66
LINC00565-201ENST00000562710 TPD52L1Q16890 204 aaPredicted RBP25.43■■□□□ 1.66
LINC00565-201ENST00000562710 PUS3Q9BZE2 481 aaKnown RBP25.43■■□□□ 1.66
LINC00565-201ENST00000562710 PCDHA7Q9UN72 937 aa25.43■■□□□ 1.66
LINC00565-201ENST00000562710 A0A087WWV3 80 aa25.43■■□□□ 1.66
LINC00565-201ENST00000562710 ATF3P18847 181 aa25.43■■□□□ 1.66
LINC00565-201ENST00000562710 ZBTB3Q9H5J0 574 aa25.43■■□□□ 1.66
LINC00565-201ENST00000562710 RTEL1Q9NZ71 1219 aa25.43■■□□□ 1.66
LINC00565-201ENST00000562710 PAXBP1Q9Y5B6 917 aa25.43■■□□□ 1.66
LINC00565-201ENST00000562710 A1BGP04217 495 aa25.42■■□□□ 1.66
LINC00565-201ENST00000562710 FMR1NBQ8N0W7 255 aaPredicted RBP25.42■■□□□ 1.66
LINC00565-201ENST00000562710 FKBP4Q02790 459 aaKnown RBP eCLIP25.42■■□□□ 1.66
LINC00565-201ENST00000562710 ADALQ6DHV7 355 aa25.42■■□□□ 1.66
LINC00565-201ENST00000562710 CEP57L1Q8IYX8 460 aa25.42■■□□□ 1.66
LINC00565-201ENST00000562710 MRPS27Q92552 414 aaKnown RBP25.42■■□□□ 1.66
LINC00565-201ENST00000562710 RBM6P78332 1123 aaKnown RBP25.41■■□□□ 1.66
LINC00565-201ENST00000562710 ARID5BQ14865 1188 aa25.41■■□□□ 1.66
LINC00565-201ENST00000562710 GPHNQ9NQX3 736 aaPredicted RBP25.41■■□□□ 1.66
LINC00565-201ENST00000562710 CEP126Q9P2H0 1117 aa25.41■■□□□ 1.66
LINC00565-201ENST00000562710 CTNNA3Q9UI47 895 aa25.41■■□□□ 1.66
LINC00565-201ENST00000562710 UBR2Q8IWV8 1755 aa25.41■■□□□ 1.66
LINC00565-201ENST00000562710 ATP2B3Q16720 1220 aa25.41■■□□□ 1.66
LINC00565-201ENST00000562710 LRRFIP1Q32MZ4 808 aaKnown RBP25.41■■□□□ 1.66
LINC00565-201ENST00000562710 NWD2Q9ULI1 1742 aa25.41■■□□□ 1.66
LINC00565-201ENST00000562710 TRHP20396 242 aaPredicted RBP25.4■■□□□ 1.66
LINC00565-201ENST00000562710 SYCP1Q15431 976 aa25.4■■□□□ 1.66
LINC00565-201ENST00000562710 A0A1W2PQ27 194 aa25.4■■□□□ 1.66
LINC00565-201ENST00000562710 A0A1W2PQ64 194 aa25.4■■□□□ 1.66
LINC00565-201ENST00000562710 A0A1W2PQD8 194 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms