RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 MAPK1P28482 360 aa10.78□□□□□ -0.68
SMG1-204ENST00000561940 BAG6P46379 1132 aa10.78□□□□□ -0.68
SMG1-204ENST00000561940 PDE3BQ13370 1112 aa10.78□□□□□ -0.68
SMG1-204ENST00000561940 POP1Q99575 1024 aaKnown RBP10.78□□□□□ -0.68
SMG1-204ENST00000561940 LATS2Q9NRM7 1088 aa10.78□□□□□ -0.68
SMG1-204ENST00000561940 C1QTNF9BB2RNN3 333 aa10.77□□□□□ -0.69
SMG1-204ENST00000561940 RAC1P63000 192 aa10.77□□□□□ -0.69
SMG1-204ENST00000561940 FAM129BQ96TA1 746 aa10.77□□□□□ -0.69
SMG1-204ENST00000561940 OSMRQ99650 979 aa10.77□□□□□ -0.69
SMG1-204ENST00000561940 SH2B1Q9NRF2 756 aaPredicted RBP10.77□□□□□ -0.69
SMG1-204ENST00000561940 DZANK1Q9NVP4 752 aa10.77□□□□□ -0.69
SMG1-204ENST00000561940 AMOTL2Q9Y2J4 779 aa10.77□□□□□ -0.69
SMG1-204ENST00000561940 GPR182O15218 404 aa10.76□□□□□ -0.69
SMG1-204ENST00000561940 CHRNA4P43681 627 aa10.76□□□□□ -0.69
SMG1-204ENST00000561940 TXNDC11Q6PKC3 985 aa10.76□□□□□ -0.69
SMG1-204ENST00000561940 SHISA2Q6UWI4 295 aa10.76□□□□□ -0.69
SMG1-204ENST00000561940 ILDR2Q71H61 639 aa10.76□□□□□ -0.69
SMG1-204ENST00000561940 ALYREFQ86V81 257 aaKnown RBP10.76□□□□□ -0.69
SMG1-204ENST00000561940 CD163Q86VB7 1156 aa10.76□□□□□ -0.69
SMG1-204ENST00000561940 DCTN4Q9UJW0 460 aa10.76□□□□□ -0.69
SMG1-204ENST00000561940 NFKBIEO00221 500 aa10.75□□□□□ -0.69
SMG1-204ENST00000561940 RBM25P49756 843 aaKnown RBP10.75□□□□□ -0.69
SMG1-204ENST00000561940 FMR1NBQ8N0W7 255 aaPredicted RBP10.75□□□□□ -0.69
SMG1-204ENST00000561940 CITED4Q96RK1 184 aa10.75□□□□□ -0.69
SMG1-204ENST00000561940 ZKSCAN3Q9BRR0 538 aa10.75□□□□□ -0.69
SMG1-204ENST00000561940 LINC01387J3KSC0 135 aa10.74□□□□□ -0.69
SMG1-204ENST00000561940 APBA3O96018 575 aa10.74□□□□□ -0.69
SMG1-204ENST00000561940 EDN3P14138 238 aa10.74□□□□□ -0.69
SMG1-204ENST00000561940 TMC7Q7Z402 723 aa10.74□□□□□ -0.69
SMG1-204ENST00000561940 RBCK1Q9BYM8 510 aa10.74□□□□□ -0.69
SMG1-204ENST00000561940 PDE2AO00408 941 aaPredicted RBP10.73□□□□□ -0.69
SMG1-204ENST00000561940 DEAF1O75398 565 aaPredicted RBP10.73□□□□□ -0.69
SMG1-204ENST00000561940 IGHA2P01877 340 aa10.73□□□□□ -0.69
SMG1-204ENST00000561940 CDC27P30260 824 aa10.73□□□□□ -0.69
SMG1-204ENST00000561940 PPME1Q9Y570 386 aa10.73□□□□□ -0.69
SMG1-204ENST00000561940 NEFLP07196 543 aa10.72□□□□□ -0.69
SMG1-204ENST00000561940 PEAR1Q5VY43 1037 aaPredicted RBP10.72□□□□□ -0.69
SMG1-204ENST00000561940 ELNP15502 786 aa10.71□□□□□ -0.69
SMG1-204ENST00000561940 SELPP16109 830 aa10.71□□□□□ -0.69
SMG1-204ENST00000561940 PTPRAP18433 802 aa10.71□□□□□ -0.69
SMG1-204ENST00000561940 FBXO11Q86XK2 927 aa10.71□□□□□ -0.69
SMG1-204ENST00000561940 ASAP3Q8TDY4 903 aa10.71□□□□□ -0.69
SMG1-204ENST00000561940 ANKRD33BA6NCL7 494 aa10.7□□□□□ -0.7
SMG1-204ENST00000561940 EIF1AYO14602 144 aaKnown RBP10.7□□□□□ -0.7
SMG1-204ENST00000561940 CPNE3O75131 537 aaKnown RBP10.7□□□□□ -0.7
SMG1-204ENST00000561940 EPHA1P21709 976 aa10.7□□□□□ -0.7
SMG1-204ENST00000561940 RANGAP1P46060 587 aaPredicted RBP10.7□□□□□ -0.7
SMG1-204ENST00000561940 NXPE3Q969Y0 559 aa10.7□□□□□ -0.7
SMG1-204ENST00000561940 DMRTB1Q96MA1 342 aa10.7□□□□□ -0.7
SMG1-204ENST00000561940 CARD10Q9BWT7 1032 aa10.7□□□□□ -0.7
SMG1-204ENST00000561940 FAM177BA6PVY3 158 aa10.69□□□□□ -0.7
SMG1-204ENST00000561940 METTL12A8MUP2 240 aa10.69□□□□□ -0.7
SMG1-204ENST00000561940 MSTNO14793 375 aa10.69□□□□□ -0.7
SMG1-204ENST00000561940 SETDB1Q15047 1291 aa10.69□□□□□ -0.7
SMG1-204ENST00000561940 NPAS4Q8IUM7 802 aa10.69□□□□□ -0.7
SMG1-204ENST00000561940 GALNT12Q8IXK2 581 aa10.69□□□□□ -0.7
SMG1-204ENST00000561940 SPOCK3Q9BQ16 436 aa10.69□□□□□ -0.7
SMG1-204ENST00000561940 USP21Q9UK80 565 aa10.69□□□□□ -0.7
SMG1-204ENST00000561940 A0A1W2PP55 124 aa10.68□□□□□ -0.7
SMG1-204ENST00000561940 DTWD1Q8N5C7 304 aa10.68□□□□□ -0.7
SMG1-204ENST00000561940 TMEM102Q8N9M5 508 aaPredicted RBP10.68□□□□□ -0.7
SMG1-204ENST00000561940 CSRNP1Q96S65 589 aa10.68□□□□□ -0.7
SMG1-204ENST00000561940 NPHS2Q9NP85 383 aa10.68□□□□□ -0.7
SMG1-204ENST00000561940 PLCB3Q01970 1234 aa10.67□□□□□ -0.7
SMG1-204ENST00000561940 CACTIN-AS1Q8N1I8 211 aa10.67□□□□□ -0.7
SMG1-204ENST00000561940 GALNT11Q8NCW6 608 aa10.67□□□□□ -0.7
SMG1-204ENST00000561940 NACC1Q96RE7 527 aa10.67□□□□□ -0.7
SMG1-204ENST00000561940 ADAM19Q9H013 955 aa10.67□□□□□ -0.7
SMG1-204ENST00000561940 PROCP04070 461 aa10.66□□□□□ -0.7
SMG1-204ENST00000561940 CCDC74AQ96AQ1 378 aa10.66□□□□□ -0.7
SMG1-204ENST00000561940 ASB16Q96NS5 453 aa10.66□□□□□ -0.7
SMG1-204ENST00000561940 MUC3BQ9H195 1237 aa10.66□□□□□ -0.7
SMG1-204ENST00000561940 UNCXA6NJT0 531 aa10.65□□□□□ -0.7
SMG1-204ENST00000561940 C9orf172C9J069 976 aa10.65□□□□□ -0.7
SMG1-204ENST00000561940 DLL1O00548 723 aa10.65□□□□□ -0.7
SMG1-204ENST00000561940 SLC7A3Q8WY07 619 aa10.65□□□□□ -0.7
SMG1-204ENST00000561940 LIN7BQ9HAP6 207 aa10.65□□□□□ -0.7
SMG1-204ENST00000561940 FSCN2O14926 492 aa10.64□□□□□ -0.71
SMG1-204ENST00000561940 GADD45BO75293 160 aaPredicted RBP10.64□□□□□ -0.71
SMG1-204ENST00000561940 ERCC3P19447 782 aa10.64□□□□□ -0.71
SMG1-204ENST00000561940 GATA4P43694 442 aa10.64□□□□□ -0.71
SMG1-204ENST00000561940 CABP4P57796 275 aa10.64□□□□□ -0.71
SMG1-204ENST00000561940 HGSNATQ68CP4 663 aa10.64□□□□□ -0.71
SMG1-204ENST00000561940 FAM117BQ6P1L5 589 aa10.64□□□□□ -0.71
SMG1-204ENST00000561940 ZSCAN29Q8IWY8 852 aaPredicted RBP10.64□□□□□ -0.71
SMG1-204ENST00000561940 EPS8L3Q8TE67 593 aaKnown RBP10.64□□□□□ -0.71
SMG1-204ENST00000561940 ALKBH8Q96BT7 664 aaKnown RBP10.64□□□□□ -0.71
SMG1-204ENST00000561940 LENG1Q96BZ8 264 aaPredicted RBP10.64□□□□□ -0.71
SMG1-204ENST00000561940 EHD4Q9H223 541 aa10.64□□□□□ -0.71
SMG1-204ENST00000561940 DDX3YO15523 660 aaKnown RBP10.63□□□□□ -0.71
SMG1-204ENST00000561940 IGHA1P01876 353 aa10.63□□□□□ -0.71
SMG1-204ENST00000561940 MAPK8P45983 427 aa10.63□□□□□ -0.71
SMG1-204ENST00000561940 DSC3Q14574 896 aa10.63□□□□□ -0.71
SMG1-204ENST00000561940 SPRED3Q2MJR0 410 aa10.63□□□□□ -0.71
SMG1-204ENST00000561940 IGF2-ASQ6U949 168 aa10.63□□□□□ -0.71
SMG1-204ENST00000561940 PI16Q6UXB8 463 aa10.63□□□□□ -0.71
SMG1-204ENST00000561940 BSNDQ8WZ55 320 aa10.63□□□□□ -0.71
SMG1-204ENST00000561940 KLHDC7BQ96G42 594 aa10.63□□□□□ -0.71
SMG1-204ENST00000561940 DNAJC25Q9H1X3 360 aa10.63□□□□□ -0.71
SMG1-204ENST00000561940 KCNK4Q9NYG8 393 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms