RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 NSFL1CQ9UNZ2 370 aaKnown RBP14.31□□□□□ -0.12
HERC1-214ENST00000561400 FER1L6Q2WGJ9 1857 aa14.3□□□□□ -0.12
HERC1-214ENST00000561400 LRRCC1Q9C099 1032 aa14.3□□□□□ -0.12
HERC1-214ENST00000561400 ANKIB1Q9P2G1 1089 aa14.3□□□□□ -0.12
HERC1-214ENST00000561400 DUOX1Q9NRD9 1551 aa14.3□□□□□ -0.12
HERC1-214ENST00000561400 ANKRD45Q5TZF3 282 aa14.3□□□□□ -0.12
HERC1-214ENST00000561400 CENPQQ7L2Z9 268 aaPredicted RBP14.3□□□□□ -0.12
HERC1-214ENST00000561400 ANKRD2Q9GZV1 360 aa14.3□□□□□ -0.12
HERC1-214ENST00000561400 XDHP47989 1333 aa14.29□□□□□ -0.12
HERC1-214ENST00000561400 TIMM10P62072 90 aa14.29□□□□□ -0.12
HERC1-214ENST00000561400 CNPY4Q8N129 248 aa14.29□□□□□ -0.12
HERC1-214ENST00000561400 MPNDQ8N594 471 aa14.29□□□□□ -0.12
HERC1-214ENST00000561400 POLLQ9UGP5 575 aa14.29□□□□□ -0.12
HERC1-214ENST00000561400 FGFR2P21802 821 aa14.28□□□□□ -0.12
HERC1-214ENST00000561400 CCDC93Q567U6 631 aa14.28□□□□□ -0.12
HERC1-214ENST00000561400 CC2D2BQ6DHV5 1058 aa14.28□□□□□ -0.12
HERC1-214ENST00000561400 EAF2Q96CJ1 260 aaPredicted RBP14.28□□□□□ -0.12
HERC1-214ENST00000561400 TMX4Q9H1E5 349 aaPredicted RBP14.28□□□□□ -0.12
HERC1-214ENST00000561400 YBX3P16989 372 aaKnown RBP eCLIP14.27□□□□□ -0.12
HERC1-214ENST00000561400 NCLP19338 710 aaKnown RBP14.27□□□□□ -0.12
HERC1-214ENST00000561400 NUCB1Q02818 461 aa14.27□□□□□ -0.12
HERC1-214ENST00000561400 TNNI3KQ59H18 835 aa14.27□□□□□ -0.12
HERC1-214ENST00000561400 DPP8Q6V1X1 898 aaPredicted RBP14.27□□□□□ -0.12
HERC1-214ENST00000561400 TBC1D16Q8TBP0 767 aa14.27□□□□□ -0.12
HERC1-214ENST00000561400 GPR101Q96P66 508 aaPredicted RBP14.27□□□□□ -0.12
HERC1-214ENST00000561400 FPGT-TNNI3KV9GXZ4 949 aa14.27□□□□□ -0.12
HERC1-214ENST00000561400 ZNF804BA4D1E1 1349 aa14.27□□□□□ -0.12
HERC1-214ENST00000561400 ARAP2Q8WZ64 1704 aa14.27□□□□□ -0.13
HERC1-214ENST00000561400 ZNF609O15014 1411 aa14.27□□□□□ -0.13
HERC1-214ENST00000561400 A0A1B0GUL7 405 aa14.27□□□□□ -0.13
HERC1-214ENST00000561400 PUM3Q15397 648 aaKnown RBP14.27□□□□□ -0.13
HERC1-214ENST00000561400 ATP2B3Q16720 1220 aa14.27□□□□□ -0.13
HERC1-214ENST00000561400 C16orf71Q8IYS4 520 aaPredicted RBP14.27□□□□□ -0.13
HERC1-214ENST00000561400 LNPKQ9C0E8 428 aa14.27□□□□□ -0.13
HERC1-214ENST00000561400 GPR108Q9NPR9 543 aa14.27□□□□□ -0.13
HERC1-214ENST00000561400 LEMD3Q9Y2U8 911 aa14.27□□□□□ -0.13
HERC1-214ENST00000561400 UFL1O94874 794 aa14.26□□□□□ -0.13
HERC1-214ENST00000561400 KLRK1P26718 216 aa14.26□□□□□ -0.13
HERC1-214ENST00000561400 UBE4AQ14139 1066 aa14.26□□□□□ -0.13
HERC1-214ENST00000561400 CHD1LQ86WJ1 897 aa14.26□□□□□ -0.13
HERC1-214ENST00000561400 CLASRPQ8N2M8 674 aaKnown RBP14.26□□□□□ -0.13
HERC1-214ENST00000561400 GGA1Q9UJY5 639 aa14.26□□□□□ -0.13
HERC1-214ENST00000561400 AKAP2Q9Y2D5 859 aa14.26□□□□□ -0.13
HERC1-214ENST00000561400 CCDC88AQ3V6T2 1871 aa14.26□□□□□ -0.13
HERC1-214ENST00000561400 C6orf229H3BNL8 230 aa14.26□□□□□ -0.13
HERC1-214ENST00000561400 ATP2B4P23634 1241 aa14.26□□□□□ -0.13
HERC1-214ENST00000561400 SOGA3Q5TF21 947 aa14.26□□□□□ -0.13
HERC1-214ENST00000561400 TXNRD3Q86VQ6 643 aa14.26□□□□□ -0.13
HERC1-214ENST00000561400 RTKN2Q8IZC4 609 aa14.26□□□□□ -0.13
HERC1-214ENST00000561400 RTFDC1Q9BY42 306 aaPredicted RBP14.26□□□□□ -0.13
HERC1-214ENST00000561400 CCDC8Q9H0W5 538 aaPredicted RBP14.26□□□□□ -0.13
HERC1-214ENST00000561400 IRS2Q9Y4H2 1338 aa14.25□□□□□ -0.13
HERC1-214ENST00000561400 NFKBIEO00221 500 aa14.25□□□□□ -0.13
HERC1-214ENST00000561400 ADORA1P30542 326 aa14.25□□□□□ -0.13
HERC1-214ENST00000561400 KCNJ4P48050 445 aa14.25□□□□□ -0.13
HERC1-214ENST00000561400 AACSQ86V21 672 aa14.25□□□□□ -0.13
HERC1-214ENST00000561400 LPIN2Q92539 896 aa14.25□□□□□ -0.13
HERC1-214ENST00000561400 NEUROD6Q96NK8 337 aa14.25□□□□□ -0.13
HERC1-214ENST00000561400 TLR7Q9NYK1 1049 aaKnown RBP14.25□□□□□ -0.13
HERC1-214ENST00000561400 GRIPAP1Q4V328 841 aa14.25□□□□□ -0.13
HERC1-214ENST00000561400 OTUD7AQ8TE49 926 aaPredicted RBP14.25□□□□□ -0.13
HERC1-214ENST00000561400 DBNLQ9UJU6 430 aaKnown RBP14.25□□□□□ -0.13
HERC1-214ENST00000561400 SKAP1Q86WV1 359 aa14.24□□□□□ -0.13
HERC1-214ENST00000561400 XAGE2Q96GT9 111 aa14.24□□□□□ -0.13
HERC1-214ENST00000561400 PSMD1Q99460 953 aa14.24□□□□□ -0.13
HERC1-214ENST00000561400 DBNDD2Q9BQY9 259 aa14.24□□□□□ -0.13
HERC1-214ENST00000561400 SBF1O95248 1867 aa14.23□□□□□ -0.13
HERC1-214ENST00000561400 IFIT1P09914 478 aaKnown RBP14.23□□□□□ -0.13
HERC1-214ENST00000561400 SLC5A1P13866 664 aa14.23□□□□□ -0.13
HERC1-214ENST00000561400 KCNA4P22459 653 aa14.23□□□□□ -0.13
HERC1-214ENST00000561400 FKBP4Q02790 459 aaKnown RBP eCLIP14.23□□□□□ -0.13
HERC1-214ENST00000561400 ZBTB47Q9UFB7 747 aaPredicted RBP14.23□□□□□ -0.13
HERC1-214ENST00000561400 CHD4Q14839 1912 aa14.23□□□□□ -0.13
HERC1-214ENST00000561400 RIMBP2O15034 1052 aa14.22□□□□□ -0.13
HERC1-214ENST00000561400 IFIT2P09913 472 aaKnown RBP14.22□□□□□ -0.13
HERC1-214ENST00000561400 PDE4AP27815 886 aa14.22□□□□□ -0.13
HERC1-214ENST00000561400 GYG1P46976 350 aa14.22□□□□□ -0.13
HERC1-214ENST00000561400 RASSF7Q02833 373 aa14.22□□□□□ -0.13
HERC1-214ENST00000561400 GPR162Q16538 588 aa14.22□□□□□ -0.13
HERC1-214ENST00000561400 WASHC4Q2M389 1173 aa14.22□□□□□ -0.13
HERC1-214ENST00000561400 C15orf52Q6ZUT6 534 aaKnown RBP14.22□□□□□ -0.13
HERC1-214ENST00000561400 FAM84BQ96KN1 310 aaPredicted RBP14.22□□□□□ -0.13
HERC1-214ENST00000561400 ZNF277Q9NRM2 450 aaPredicted RBP14.22□□□□□ -0.13
HERC1-214ENST00000561400 SALL3Q9BXA9 1300 aa14.22□□□□□ -0.13
HERC1-214ENST00000561400 MED23Q9ULK4 1368 aa14.22□□□□□ -0.13
HERC1-214ENST00000561400 BCAMP50895 628 aa14.22□□□□□ -0.13
HERC1-214ENST00000561400 PRELPP51888 382 aa14.22□□□□□ -0.13
HERC1-214ENST00000561400 ARHGAP27Q6ZUM4 889 aa14.22□□□□□ -0.13
HERC1-214ENST00000561400 TAOK3Q9H2K8 898 aa14.22□□□□□ -0.13
HERC1-214ENST00000561400 KCNG1Q9UIX4 513 aa14.22□□□□□ -0.13
HERC1-214ENST00000561400 AOC3Q16853 763 aa14.21□□□□□ -0.13
HERC1-214ENST00000561400 SUPT20HQ8NEM7 779 aa14.21□□□□□ -0.13
HERC1-214ENST00000561400 ZC3H12CQ9C0D7 883 aaKnown RBP14.21□□□□□ -0.13
HERC1-214ENST00000561400 COL4A5P29400 1685 aa14.21□□□□□ -0.13
HERC1-214ENST00000561400 LTBP3Q9NS15 1303 aa14.21□□□□□ -0.13
HERC1-214ENST00000561400 MYH13Q9UKX3 1938 aa14.21□□□□□ -0.14
HERC1-214ENST00000561400 PHKA1P46020 1223 aa14.21□□□□□ -0.14
HERC1-214ENST00000561400 CCDC102BQ68D86 513 aa14.21□□□□□ -0.14
HERC1-214ENST00000561400 FBXO33Q7Z6M2 555 aa14.21□□□□□ -0.14
HERC1-214ENST00000561400 ZNF830Q96NB3 372 aaPredicted RBP14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms