RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 COA1Q9GZY4 146 aa24.86■■□□□ 1.57
TSPAN3-210ENST00000561277 SIL1Q9H173 461 aa24.86■■□□□ 1.57
TSPAN3-210ENST00000561277 PNMA8AQ86V59 439 aaPredicted RBP24.85■■□□□ 1.57
TSPAN3-210ENST00000561277 FBXW7Q969H0 707 aa24.85■■□□□ 1.57
TSPAN3-210ENST00000561277 SRGAP3O43295 1099 aa24.84■■□□□ 1.57
TSPAN3-210ENST00000561277 LDHDQ86WU2 507 aa24.84■■□□□ 1.57
TSPAN3-210ENST00000561277 CLEC11AQ9Y240 323 aa24.84■■□□□ 1.57
TSPAN3-210ENST00000561277 IRS2Q9Y4H2 1338 aa24.84■■□□□ 1.57
TSPAN3-210ENST00000561277 EYA2O00167 538 aa24.84■■□□□ 1.57
TSPAN3-210ENST00000561277 PA2G4Q9UQ80 394 aaKnown RBP24.84■■□□□ 1.57
TSPAN3-210ENST00000561277 PSME4Q14997 1843 aa24.83■■□□□ 1.57
TSPAN3-210ENST00000561277 SHTN1A0MZ66 631 aa24.83■■□□□ 1.57
TSPAN3-210ENST00000561277 USP17L3A6NCW0 530 aa24.83■■□□□ 1.57
TSPAN3-210ENST00000561277 USP17L4A6NCW7 530 aa24.83■■□□□ 1.57
TSPAN3-210ENST00000561277 VIL1P09327 827 aaKnown RBP24.83■■□□□ 1.57
TSPAN3-210ENST00000561277 CHADLQ6NUI6 762 aa24.83■■□□□ 1.57
TSPAN3-210ENST00000561277 USP17L1Q7RTZ2 530 aa24.83■■□□□ 1.57
TSPAN3-210ENST00000561277 MICALL2Q8IY33 904 aa24.83■■□□□ 1.57
TSPAN3-210ENST00000561277 C1orf115Q9H7X2 142 aa24.83■■□□□ 1.57
TSPAN3-210ENST00000561277 ADARB2Q9NS39 739 aaKnown RBP24.83■■□□□ 1.57
TSPAN3-210ENST00000561277 CNOT7Q9UIV1 285 aaKnown RBP24.83■■□□□ 1.57
TSPAN3-210ENST00000561277 MS4A1P11836 297 aa24.82■■□□□ 1.56
TSPAN3-210ENST00000561277 UBE4AQ14139 1066 aa24.82■■□□□ 1.56
TSPAN3-210ENST00000561277 C15orf52Q6ZUT6 534 aaKnown RBP24.82■■□□□ 1.56
TSPAN3-210ENST00000561277 ADAMTSL1Q8N6G6 1762 aa24.81■■□□□ 1.56
TSPAN3-210ENST00000561277 PDE8BO95263 885 aa24.81■■□□□ 1.56
TSPAN3-210ENST00000561277 HSPA6P17066 643 aa24.81■■□□□ 1.56
TSPAN3-210ENST00000561277 RPS12P25398 132 aaKnown RBP24.81■■□□□ 1.56
TSPAN3-210ENST00000561277 RSBN1LQ6PCB5 846 aaPredicted RBP24.81■■□□□ 1.56
TSPAN3-210ENST00000561277 ZNF804AQ7Z570 1209 aa24.81■■□□□ 1.56
TSPAN3-210ENST00000561277 VGLL2Q8N8G2 317 aa24.81■■□□□ 1.56
TSPAN3-210ENST00000561277 DPF2Q92785 391 aa24.81■■□□□ 1.56
TSPAN3-210ENST00000561277 CD209Q9NNX6 404 aa24.81■■□□□ 1.56
TSPAN3-210ENST00000561277 ZBTB7BO15156 539 aaPredicted RBP24.8■■□□□ 1.56
TSPAN3-210ENST00000561277 MTX1Q13505 466 aa24.8■■□□□ 1.56
TSPAN3-210ENST00000561277 ATG9AQ7Z3C6 839 aa24.8■■□□□ 1.56
TSPAN3-210ENST00000561277 H7C1D1 291 aa24.8■■□□□ 1.56
TSPAN3-210ENST00000561277 USP50Q70EL3 339 aaPredicted RBP24.8■■□□□ 1.56
TSPAN3-210ENST00000561277 GYG1P46976 350 aa24.79■■□□□ 1.56
TSPAN3-210ENST00000561277 MXD3Q9BW11 206 aa24.79■■□□□ 1.56
TSPAN3-210ENST00000561277 COPRSQ9NQ92 184 aa24.79■■□□□ 1.56
TSPAN3-210ENST00000561277 COG6Q9Y2V7 657 aa24.79■■□□□ 1.56
TSPAN3-210ENST00000561277 PNMA6EA0A0J9YXQ4 647 aa24.78■■□□□ 1.56
TSPAN3-210ENST00000561277 CIAO1O76071 339 aa24.78■■□□□ 1.56
TSPAN3-210ENST00000561277 GTF2IP78347 998 aa24.78■■□□□ 1.56
TSPAN3-210ENST00000561277 STRIP1Q5VSL9 837 aa24.78■■□□□ 1.56
TSPAN3-210ENST00000561277 TRPM4Q8TD43 1214 aa24.78■■□□□ 1.56
TSPAN3-210ENST00000561277 FBXO3Q9UK99 471 aa24.78■■□□□ 1.56
TSPAN3-210ENST00000561277 CEP350Q5VT06 3117 aa24.78■■□□□ 1.56
TSPAN3-210ENST00000561277 ZNF646O15015 1829 aaPredicted RBP24.77■■□□□ 1.56
TSPAN3-210ENST00000561277 MVPQ14764 893 aaKnown RBP24.77■■□□□ 1.56
TSPAN3-210ENST00000561277 PUM3Q15397 648 aaKnown RBP24.77■■□□□ 1.56
TSPAN3-210ENST00000561277 DACT2Q5SW24 774 aa24.77■■□□□ 1.56
TSPAN3-210ENST00000561277 MAP1SQ66K74 1059 aaPredicted RBP24.77■■□□□ 1.56
TSPAN3-210ENST00000561277 TTLL5Q6EMB2 1281 aa24.77■■□□□ 1.56
TSPAN3-210ENST00000561277 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.77■■□□□ 1.56
TSPAN3-210ENST00000561277 TBC1D10BQ4KMP7 808 aaPredicted RBP24.76■■□□□ 1.55
TSPAN3-210ENST00000561277 SAMD7Q7Z3H4 446 aa24.76■■□□□ 1.55
TSPAN3-210ENST00000561277 AGBL3Q8NEM8 1001 aa24.76■■□□□ 1.55
TSPAN3-210ENST00000561277 ZNF609O15014 1411 aa24.76■■□□□ 1.55
TSPAN3-210ENST00000561277 HIBADHP31937 336 aaKnown RBP24.76■■□□□ 1.55
TSPAN3-210ENST00000561277 IL15P40933 162 aaPredicted RBP24.76■■□□□ 1.55
TSPAN3-210ENST00000561277 RBM26Q5T8P6 1007 aaKnown RBP24.76■■□□□ 1.55
TSPAN3-210ENST00000561277 FAM84BQ96KN1 310 aaPredicted RBP24.76■■□□□ 1.55
TSPAN3-210ENST00000561277 JAG2Q9Y219 1238 aa24.76■■□□□ 1.55
TSPAN3-210ENST00000561277 EGFRP00533 1210 aa24.75■■□□□ 1.55
TSPAN3-210ENST00000561277 IL1R1P14778 569 aa24.75■■□□□ 1.55
TSPAN3-210ENST00000561277 C20orf194Q5TEA3 1177 aa24.75■■□□□ 1.55
TSPAN3-210ENST00000561277 VPS37DQ86XT2 251 aa24.75■■□□□ 1.55
TSPAN3-210ENST00000561277 CEP126Q9P2H0 1117 aa24.75■■□□□ 1.55
TSPAN3-210ENST00000561277 FGFR2P21802 821 aa24.74■■□□□ 1.55
TSPAN3-210ENST00000561277 HIRAP54198 1017 aaPredicted RBP24.74■■□□□ 1.55
TSPAN3-210ENST00000561277 GMLQ99445 158 aa24.74■■□□□ 1.55
TSPAN3-210ENST00000561277 IFIT1P09914 478 aaKnown RBP24.73■■□□□ 1.55
TSPAN3-210ENST00000561277 CAVIN4Q5BKX8 364 aa24.73■■□□□ 1.55
TSPAN3-210ENST00000561277 CNTROBQ8N137 903 aa24.73■■□□□ 1.55
TSPAN3-210ENST00000561277 DDX19BQ9UMR2 479 aa24.73■■□□□ 1.55
TSPAN3-210ENST00000561277 MYO3BQ8WXR4 1341 aa24.72■■□□□ 1.55
TSPAN3-210ENST00000561277 USP17L8P0C7I0 530 aa24.72■■□□□ 1.55
TSPAN3-210ENST00000561277 SLC5A1P13866 664 aa24.72■■□□□ 1.55
TSPAN3-210ENST00000561277 ATP2B3Q16720 1220 aa24.72■■□□□ 1.55
TSPAN3-210ENST00000561277 KIF4BQ2VIQ3 1234 aa24.72■■□□□ 1.55
TSPAN3-210ENST00000561277 APLP1P51693 650 aa24.71■■□□□ 1.55
TSPAN3-210ENST00000561277 ATP8B2P98198 1209 aa24.71■■□□□ 1.55
TSPAN3-210ENST00000561277 LPIN2Q92539 896 aa24.71■■□□□ 1.55
TSPAN3-210ENST00000561277 IQSEC3Q9UPP2 1182 aaPredicted RBP24.71■■□□□ 1.55
TSPAN3-210ENST00000561277 HTRA3P83110 453 aa24.71■■□□□ 1.55
TSPAN3-210ENST00000561277 KIAA0825Q8IV33 1275 aa24.71■■□□□ 1.55
TSPAN3-210ENST00000561277 BCAMP50895 628 aa24.7■■□□□ 1.54
TSPAN3-210ENST00000561277 ZNF280AP59817 542 aaPredicted RBP24.7■■□□□ 1.54
TSPAN3-210ENST00000561277 POLA2Q14181 598 aa24.7■■□□□ 1.54
TSPAN3-210ENST00000561277 PDE3AQ14432 1141 aa24.7■■□□□ 1.54
TSPAN3-210ENST00000561277 FBXO33Q7Z6M2 555 aa24.7■■□□□ 1.54
TSPAN3-210ENST00000561277 TDRD7Q8NHU6 1098 aaKnown RBP24.7■■□□□ 1.54
TSPAN3-210ENST00000561277 FRAT2O75474 233 aaPredicted RBP24.69■■□□□ 1.54
TSPAN3-210ENST00000561277 SASH1O94885 1247 aa24.69■■□□□ 1.54
TSPAN3-210ENST00000561277 ITGBL1O95965 494 aaPredicted RBP24.69■■□□□ 1.54
TSPAN3-210ENST00000561277 TFCP2Q12800 502 aa24.69■■□□□ 1.54
TSPAN3-210ENST00000561277 CEP85Q6P2H3 762 aa24.69■■□□□ 1.54
TSPAN3-210ENST00000561277 OGFOD1Q8N543 542 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms