RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 SLC4A10Q6U841 1118 aa14.24□□□□□ -0.13
GABPB1-210ENST00000560825 SSH1Q8WYL5 1049 aa14.24□□□□□ -0.13
GABPB1-210ENST00000560825 ZIC5Q96T25 663 aa14.24□□□□□ -0.13
GABPB1-210ENST00000560825 ZNF408Q9H9D4 720 aa14.24□□□□□ -0.13
GABPB1-210ENST00000560825 WDR33Q9C0J8 1336 aaKnown RBP14.24□□□□□ -0.13
GABPB1-210ENST00000560825 H7C1D1 291 aa14.24□□□□□ -0.13
GABPB1-210ENST00000560825 HSP90B1P14625 803 aaKnown RBP14.24□□□□□ -0.13
GABPB1-210ENST00000560825 ATP2B4P23634 1241 aa14.24□□□□□ -0.13
GABPB1-210ENST00000560825 CHRNDQ07001 517 aa14.24□□□□□ -0.13
GABPB1-210ENST00000560825 RSBN1LQ6PCB5 846 aaPredicted RBP14.24□□□□□ -0.13
GABPB1-210ENST00000560825 LMBR1LQ6UX01 489 aa14.24□□□□□ -0.13
GABPB1-210ENST00000560825 SUCLG2Q96I99 432 aa14.24□□□□□ -0.13
GABPB1-210ENST00000560825 TLL2Q9Y6L7 1015 aa14.24□□□□□ -0.13
GABPB1-210ENST00000560825 ZNF609O15014 1411 aa14.23□□□□□ -0.13
GABPB1-210ENST00000560825 ECM29Q5VYK3 1845 aa14.23□□□□□ -0.13
GABPB1-210ENST00000560825 GRM8O00222 908 aa14.23□□□□□ -0.13
GABPB1-210ENST00000560825 KIF4BQ2VIQ3 1234 aa14.23□□□□□ -0.13
GABPB1-210ENST00000560825 SAPCD2Q86UD0 394 aa14.23□□□□□ -0.13
GABPB1-210ENST00000560825 CAPNS2Q96L46 248 aa14.23□□□□□ -0.13
GABPB1-210ENST00000560825 ZNF804BA4D1E1 1349 aa14.22□□□□□ -0.13
GABPB1-210ENST00000560825 ZNF280AP59817 542 aaPredicted RBP14.22□□□□□ -0.13
GABPB1-210ENST00000560825 DACT2Q5SW24 774 aa14.22□□□□□ -0.13
GABPB1-210ENST00000560825 TRMT2AQ8IZ69 625 aaKnown RBP14.22□□□□□ -0.13
GABPB1-210ENST00000560825 ZC3H15Q8WU90 426 aaKnown RBP14.22□□□□□ -0.13
GABPB1-210ENST00000560825 PUS3Q9BZE2 481 aaKnown RBP14.22□□□□□ -0.13
GABPB1-210ENST00000560825 WBP1LQ9NX94 342 aa14.22□□□□□ -0.13
GABPB1-210ENST00000560825 GGA3Q9NZ52 723 aa14.22□□□□□ -0.13
GABPB1-210ENST00000560825 CHMP3Q9Y3E7 222 aa14.22□□□□□ -0.13
GABPB1-210ENST00000560825 PCDHAC2Q9Y5I4 1007 aa14.22□□□□□ -0.13
GABPB1-210ENST00000560825 RPS12P25398 132 aaKnown RBP14.21□□□□□ -0.13
GABPB1-210ENST00000560825 IGHMBP2P38935 993 aaKnown RBP14.21□□□□□ -0.13
GABPB1-210ENST00000560825 NBPF9Q3BBW0 867 aa14.21□□□□□ -0.13
GABPB1-210ENST00000560825 TSKSQ9UJT2 592 aa14.21□□□□□ -0.13
GABPB1-210ENST00000560825 AOX1Q06278 1338 aa14.21□□□□□ -0.14
GABPB1-210ENST00000560825 ARAP2Q8WZ64 1704 aa14.21□□□□□ -0.14
GABPB1-210ENST00000560825 ANKRD18BA2A2Z9 1011 aa14.2□□□□□ -0.14
GABPB1-210ENST00000560825 USP17L3A6NCW0 530 aa14.2□□□□□ -0.14
GABPB1-210ENST00000560825 USP17L4A6NCW7 530 aa14.2□□□□□ -0.14
GABPB1-210ENST00000560825 G3V3G9 751 aa14.2□□□□□ -0.14
GABPB1-210ENST00000560825 SCARF1Q14162 830 aa14.2□□□□□ -0.14
GABPB1-210ENST00000560825 DCAF8Q5TAQ9 597 aa14.2□□□□□ -0.14
GABPB1-210ENST00000560825 ANGEL2Q5VTE6 544 aaKnown RBP14.2□□□□□ -0.14
GABPB1-210ENST00000560825 PRAMEF18Q5VWM3 479 aa14.2□□□□□ -0.14
GABPB1-210ENST00000560825 PAXIP1Q6ZW49 1069 aaPredicted RBP14.2□□□□□ -0.14
GABPB1-210ENST00000560825 CDC37L1Q7L3B6 337 aa14.2□□□□□ -0.14
GABPB1-210ENST00000560825 USP17L1Q7RTZ2 530 aa14.2□□□□□ -0.14
GABPB1-210ENST00000560825 KRT26Q7Z3Y9 468 aa14.2□□□□□ -0.14
GABPB1-210ENST00000560825 FBXW7Q969H0 707 aa14.2□□□□□ -0.14
GABPB1-210ENST00000560825 MPHOSPH8Q99549 860 aa14.2□□□□□ -0.14
GABPB1-210ENST00000560825 SRCIN1Q9C0H9 1055 aa14.2□□□□□ -0.14
GABPB1-210ENST00000560825 JAG2Q9Y219 1238 aa14.2□□□□□ -0.14
GABPB1-210ENST00000560825 PODNQ7Z5L7 613 aa14.19□□□□□ -0.14
GABPB1-210ENST00000560825 CERS5Q8N5B7 392 aa14.19□□□□□ -0.14
GABPB1-210ENST00000560825 ANKRD44Q8N8A2 993 aa14.19□□□□□ -0.14
GABPB1-210ENST00000560825 KLHDC4Q8TBB5 520 aa14.19□□□□□ -0.14
GABPB1-210ENST00000560825 MYOZ2Q9NPC6 264 aa14.19□□□□□ -0.14
GABPB1-210ENST00000560825 E9PSI1 815 aa14.18□□□□□ -0.14
GABPB1-210ENST00000560825 PLIN1O60240 522 aa14.18□□□□□ -0.14
GABPB1-210ENST00000560825 ALDH1L1O75891 902 aa14.18□□□□□ -0.14
GABPB1-210ENST00000560825 LBX1P52954 281 aa14.18□□□□□ -0.14
GABPB1-210ENST00000560825 IFIT5Q13325 482 aaKnown RBP14.18□□□□□ -0.14
GABPB1-210ENST00000560825 MOB2Q70IA6 237 aa14.18□□□□□ -0.14
GABPB1-210ENST00000560825 AGBL3Q8NEM8 1001 aa14.18□□□□□ -0.14
GABPB1-210ENST00000560825 BICC1Q9H694 974 aaKnown RBP14.18□□□□□ -0.14
GABPB1-210ENST00000560825 C9orf78Q9NZ63 289 aaPredicted RBP14.18□□□□□ -0.14
GABPB1-210ENST00000560825 LEMD3Q9Y2U8 911 aa14.18□□□□□ -0.14
GABPB1-210ENST00000560825 UTYO14607 1347 aa14.18□□□□□ -0.14
GABPB1-210ENST00000560825 SASH1O94885 1247 aa14.17□□□□□ -0.14
GABPB1-210ENST00000560825 USP17L8P0C7I0 530 aa14.17□□□□□ -0.14
GABPB1-210ENST00000560825 HSPA8P11142 646 aaKnown RBP14.17□□□□□ -0.14
GABPB1-210ENST00000560825 TNS4Q8IZW8 715 aa14.17□□□□□ -0.14
GABPB1-210ENST00000560825 CDCA5Q96FF9 252 aa14.17□□□□□ -0.14
GABPB1-210ENST00000560825 CASP8AP2Q9UKL3 1982 aa14.17□□□□□ -0.14
GABPB1-210ENST00000560825 FAM155AB1AL88 458 aaPredicted RBP14.16□□□□□ -0.14
GABPB1-210ENST00000560825 GTF2IP78347 998 aa14.16□□□□□ -0.14
GABPB1-210ENST00000560825 LRRC24Q50LG9 513 aa14.16□□□□□ -0.14
GABPB1-210ENST00000560825 KIAA0825Q8IV33 1275 aa14.16□□□□□ -0.14
GABPB1-210ENST00000560825 ANKRD2Q9GZV1 360 aa14.16□□□□□ -0.14
GABPB1-210ENST00000560825 COA1Q9GZY4 146 aa14.16□□□□□ -0.14
GABPB1-210ENST00000560825 USP44Q9H0E7 712 aa14.16□□□□□ -0.14
GABPB1-210ENST00000560825 CD209Q9NNX6 404 aa14.16□□□□□ -0.14
GABPB1-210ENST00000560825 MYH13Q9UKX3 1938 aa14.16□□□□□ -0.14
GABPB1-210ENST00000560825 TTLL5Q6EMB2 1281 aa14.15□□□□□ -0.14
GABPB1-210ENST00000560825 DCPSQ96C86 337 aaKnown RBP14.15□□□□□ -0.14
GABPB1-210ENST00000560825 FZD1Q9UP38 647 aa14.15□□□□□ -0.14
GABPB1-210ENST00000560825 TNNQ9UQP3 1299 aa14.15□□□□□ -0.14
GABPB1-210ENST00000560825 WNT10BO00744 389 aa14.15□□□□□ -0.14
GABPB1-210ENST00000560825 HUNKP57058 714 aa14.15□□□□□ -0.14
GABPB1-210ENST00000560825 GRIK5Q16478 980 aa14.15□□□□□ -0.14
GABPB1-210ENST00000560825 STRIP1Q5VSL9 837 aa14.15□□□□□ -0.14
GABPB1-210ENST00000560825 LDHAL6AQ6ZMR3 332 aa14.15□□□□□ -0.14
GABPB1-210ENST00000560825 ZBED3Q96IU2 234 aaPredicted RBP14.15□□□□□ -0.14
GABPB1-210ENST00000560825 PAPPA2Q9BXP8 1791 aa14.15□□□□□ -0.14
GABPB1-210ENST00000560825 CCER2I3L3R5 266 aa14.14□□□□□ -0.15
GABPB1-210ENST00000560825 GYG1P46976 350 aa14.14□□□□□ -0.15
GABPB1-210ENST00000560825 KCNJ4P48050 445 aa14.14□□□□□ -0.15
GABPB1-210ENST00000560825 CCDC57Q2TAC2 916 aa14.14□□□□□ -0.15
GABPB1-210ENST00000560825 RABL6Q3YEC7 729 aaPredicted RBP14.14□□□□□ -0.15
GABPB1-210ENST00000560825 MIER1Q8N108 512 aa14.14□□□□□ -0.15
GABPB1-210ENST00000560825 GBA2Q9HCG7 927 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms