RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 SEC31AO94979 1220 aaKnown RBP18.62■□□□□ 0.57
PBX1-219ENST00000560641 NOM1Q5C9Z4 860 aaKnown RBP18.62■□□□□ 0.57
PBX1-219ENST00000560641 IFFO2Q5TF58 517 aa18.62■□□□□ 0.57
PBX1-219ENST00000560641 NUTM2FA1L443 756 aa18.62■□□□□ 0.57
PBX1-219ENST00000560641 NPHP1O15259 732 aa18.62■□□□□ 0.57
PBX1-219ENST00000560641 CPP00450 1065 aa18.62■□□□□ 0.57
PBX1-219ENST00000560641 NUTM2GQ5VZR2 741 aa18.62■□□□□ 0.57
PBX1-219ENST00000560641 TMEM139Q8IV31 216 aa18.62■□□□□ 0.57
PBX1-219ENST00000560641 CARD6Q9BX69 1037 aa18.62■□□□□ 0.57
PBX1-219ENST00000560641 VWA3AA6NCI4 1184 aa18.61■□□□□ 0.57
PBX1-219ENST00000560641 TNNT3P45378 269 aaPredicted RBP18.61■□□□□ 0.57
PBX1-219ENST00000560641 HSD3B7Q9H2F3 369 aa18.61■□□□□ 0.57
PBX1-219ENST00000560641 CEMIPQ8WUJ3 1361 aa18.61■□□□□ 0.57
PBX1-219ENST00000560641 TAF5LO75529 589 aa18.61■□□□□ 0.57
PBX1-219ENST00000560641 TICAM2Q86XR7 235 aa18.61■□□□□ 0.57
PBX1-219ENST00000560641 LMO7Q8WWI1 1683 aa18.61■□□□□ 0.57
PBX1-219ENST00000560641 A0A1B0GUL7 405 aa18.61■□□□□ 0.57
PBX1-219ENST00000560641 CBFA2T2O43439 604 aa18.61■□□□□ 0.57
PBX1-219ENST00000560641 TAF7Q15545 349 aaPredicted RBP18.61■□□□□ 0.57
PBX1-219ENST00000560641 FSIP1Q8NA03 581 aa18.61■□□□□ 0.57
PBX1-219ENST00000560641 NSUN7Q8NE18 718 aaKnown RBP18.61■□□□□ 0.57
PBX1-219ENST00000560641 CHMP4CQ96CF2 233 aa18.61■□□□□ 0.57
PBX1-219ENST00000560641 USP28Q96RU2 1077 aa18.61■□□□□ 0.57
PBX1-219ENST00000560641 RAB21Q9UL25 225 aa18.61■□□□□ 0.57
PBX1-219ENST00000560641 UTYO14607 1347 aa18.6■□□□□ 0.57
PBX1-219ENST00000560641 A0A0D9SFI3 127 aa18.6■□□□□ 0.57
PBX1-219ENST00000560641 ARHGAP6O43182 974 aa18.6■□□□□ 0.57
PBX1-219ENST00000560641 DTNBO60941 627 aa18.6■□□□□ 0.57
PBX1-219ENST00000560641 IFIT2P09913 472 aaKnown RBP18.6■□□□□ 0.57
PBX1-219ENST00000560641 HOMER1Q86YM7 354 aa18.6■□□□□ 0.57
PBX1-219ENST00000560641 KIFC2Q96AC6 838 aa18.6■□□□□ 0.57
PBX1-219ENST00000560641 SLC26A8Q96RN1 970 aa18.6■□□□□ 0.57
PBX1-219ENST00000560641 MKRN1Q9UHC7 482 aaKnown RBP18.6■□□□□ 0.57
PBX1-219ENST00000560641 SMC2O95347 1197 aa18.6■□□□□ 0.57
PBX1-219ENST00000560641 GUCY2CP25092 1073 aa18.6■□□□□ 0.57
PBX1-219ENST00000560641 TXLNAP40222 546 aa18.59■□□□□ 0.57
PBX1-219ENST00000560641 SCRN1Q12765 414 aa18.59■□□□□ 0.57
PBX1-219ENST00000560641 DPCR1Q3MIW9 517 aa18.59■□□□□ 0.57
PBX1-219ENST00000560641 ILDR1Q86SU0 546 aaPredicted RBP18.59■□□□□ 0.57
PBX1-219ENST00000560641 DNAAF4Q8WXU2 420 aa18.59■□□□□ 0.57
PBX1-219ENST00000560641 METP08581 1390 aa18.59■□□□□ 0.57
PBX1-219ENST00000560641 POTEB2H3BUK9 544 aa18.59■□□□□ 0.57
PBX1-219ENST00000560641 TRERF1Q96PN7 1200 aa18.59■□□□□ 0.57
PBX1-219ENST00000560641 NEK1Q96PY6 1258 aa18.59■□□□□ 0.57
PBX1-219ENST00000560641 TAF6LQ9Y6J9 622 aa18.59■□□□□ 0.57
PBX1-219ENST00000560641 TRIM66O15016 1216 aa18.59■□□□□ 0.57
PBX1-219ENST00000560641 HMGB1P09429 215 aaKnown RBP18.59■□□□□ 0.57
PBX1-219ENST00000560641 FBXL16Q8N461 479 aa18.59■□□□□ 0.57
PBX1-219ENST00000560641 PARD6BQ9BYG5 372 aa18.59■□□□□ 0.57
PBX1-219ENST00000560641 PIK3C2AO00443 1686 aa18.58■□□□□ 0.57
PBX1-219ENST00000560641 TUBB2AQ13885 445 aa18.58■□□□□ 0.57
PBX1-219ENST00000560641 VSTM4Q8IW00 320 aa18.58■□□□□ 0.57
PBX1-219ENST00000560641 SUGP1Q8IWZ8 645 aaKnown RBP18.58■□□□□ 0.57
PBX1-219ENST00000560641 GOLGA1Q92805 767 aa18.58■□□□□ 0.57
PBX1-219ENST00000560641 TUBB2BQ9BVA1 445 aa18.58■□□□□ 0.57
PBX1-219ENST00000560641 ZCCHC17Q9NP64 241 aaKnown RBP18.58■□□□□ 0.57
PBX1-219ENST00000560641 URI1O94763 535 aaPredicted RBP18.58■□□□□ 0.56
PBX1-219ENST00000560641 FANCCQ00597 558 aa18.58■□□□□ 0.56
PBX1-219ENST00000560641 HDGFL1Q5TGJ6 251 aa18.58■□□□□ 0.56
PBX1-219ENST00000560641 PHAXQ9H814 394 aaKnown RBP18.58■□□□□ 0.56
PBX1-219ENST00000560641 H3BQF6 201 aa18.57■□□□□ 0.56
PBX1-219ENST00000560641 YEATS4O95619 227 aa18.57■□□□□ 0.56
PBX1-219ENST00000560641 PPP2R3AQ06190 1150 aa18.57■□□□□ 0.56
PBX1-219ENST00000560641 TBX2Q13207 712 aaPredicted RBP18.57■□□□□ 0.56
PBX1-219ENST00000560641 LONRF2Q1L5Z9 754 aa18.57■□□□□ 0.56
PBX1-219ENST00000560641 C10orf67Q8IYJ2 551 aa18.57■□□□□ 0.56
PBX1-219ENST00000560641 MSANTD4Q8NCY6 345 aa18.57■□□□□ 0.56
PBX1-219ENST00000560641 PCDHA7Q9UN72 937 aa18.57■□□□□ 0.56
PBX1-219ENST00000560641 CTDNEP1O95476 244 aa18.57■□□□□ 0.56
PBX1-219ENST00000560641 TUBE1Q9UJT0 475 aa18.57■□□□□ 0.56
PBX1-219ENST00000560641 U3KPZ7 1027 aaPredicted RBP18.57■□□□□ 0.56
PBX1-219ENST00000560641 COL15A1P39059 1388 aa18.56■□□□□ 0.56
PBX1-219ENST00000560641 POLR3EQ9NVU0 708 aa18.56■□□□□ 0.56
PBX1-219ENST00000560641 PPP2R2CQ9Y2T4 447 aa18.56■□□□□ 0.56
PBX1-219ENST00000560641 APOBRQ0VD83 1088 aa18.56■□□□□ 0.56
PBX1-219ENST00000560641 Q6ZUG5 572 aa18.56■□□□□ 0.56
PBX1-219ENST00000560641 IL17REQ8NFR9 667 aa18.56■□□□□ 0.56
PBX1-219ENST00000560641 DDX54Q8TDD1 881 aaKnown RBP18.56■□□□□ 0.56
PBX1-219ENST00000560641 KCNG4Q8TDN1 519 aa18.56■□□□□ 0.56
PBX1-219ENST00000560641 EYA1Q99502 592 aa18.56■□□□□ 0.56
PBX1-219ENST00000560641 GTF2A1P52655 376 aaPredicted RBP18.55■□□□□ 0.56
PBX1-219ENST00000560641 LEKR1Q6ZMV7 388 aa18.55■□□□□ 0.56
PBX1-219ENST00000560641 SWT1Q5T5J6 900 aaKnown RBP18.55■□□□□ 0.56
PBX1-219ENST00000560641 ANKARQ7Z5J8 1434 aa18.55■□□□□ 0.56
PBX1-219ENST00000560641 LINC00301Q8NCQ3 95 aa18.55■□□□□ 0.56
PBX1-219ENST00000560641 DDX11Q96FC9 970 aa18.55■□□□□ 0.56
PBX1-219ENST00000560641 FAM237AA0A1B0GTK4 181 aa18.55■□□□□ 0.56
PBX1-219ENST00000560641 STX10O60499 249 aa18.55■□□□□ 0.56
PBX1-219ENST00000560641 CORO7P57737 925 aa18.55■□□□□ 0.56
PBX1-219ENST00000560641 STK3Q13188 491 aa18.55■□□□□ 0.56
PBX1-219ENST00000560641 BEND6Q5SZJ8 279 aaPredicted RBP18.55■□□□□ 0.56
PBX1-219ENST00000560641 NCAPGQ9BPX3 1015 aa18.55■□□□□ 0.56
PBX1-219ENST00000560641 TUBBP07437 444 aa18.54■□□□□ 0.56
PBX1-219ENST00000560641 ZNF589Q86UQ0 364 aaPredicted RBP18.54■□□□□ 0.56
PBX1-219ENST00000560641 AACSQ86V21 672 aa18.54■□□□□ 0.56
PBX1-219ENST00000560641 ELOA2Q8IYF1 753 aaPredicted RBP18.54■□□□□ 0.56
PBX1-219ENST00000560641 PPM1EQ8WY54 764 aa18.54■□□□□ 0.56
PBX1-219ENST00000560641 TCEANC2Q96MN5 208 aa18.54■□□□□ 0.56
PBX1-219ENST00000560641 NCKAP5LQ9HCH0 1330 aa18.53■□□□□ 0.56
PBX1-219ENST00000560641 SASH1O94885 1247 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms