RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 YBX3P16989 372 aaKnown RBP eCLIP20.26■□□□□ 0.83
TPM1-219ENST00000559397 TIMM10P62072 90 aa20.26■□□□□ 0.83
TPM1-219ENST00000559397 ATP2B3Q16720 1220 aa20.26■□□□□ 0.83
TPM1-219ENST00000559397 CLASRPQ8N2M8 674 aaKnown RBP20.26■□□□□ 0.83
TPM1-219ENST00000559397 OTUD7AQ8TE49 926 aaPredicted RBP20.26■□□□□ 0.83
TPM1-219ENST00000559397 LPIN2Q92539 896 aa20.26■□□□□ 0.83
TPM1-219ENST00000559397 UFL1O94874 794 aa20.26■□□□□ 0.83
TPM1-219ENST00000559397 OSBPL3Q9H4L5 887 aa20.26■□□□□ 0.83
TPM1-219ENST00000559397 ARAP2Q8WZ64 1704 aa20.25■□□□□ 0.83
TPM1-219ENST00000559397 KCNJ4P48050 445 aa20.25■□□□□ 0.83
TPM1-219ENST00000559397 GPR101Q96P66 508 aaPredicted RBP20.25■□□□□ 0.83
TPM1-219ENST00000559397 PSMD1Q99460 953 aa20.25■□□□□ 0.83
TPM1-219ENST00000559397 C6orf229H3BNL8 230 aa20.24■□□□□ 0.83
TPM1-219ENST00000559397 NFKBIEO00221 500 aa20.24■□□□□ 0.83
TPM1-219ENST00000559397 KLRK1P26718 216 aa20.24■□□□□ 0.83
TPM1-219ENST00000559397 AACSQ86V21 672 aa20.24■□□□□ 0.83
TPM1-219ENST00000559397 CCDC8Q9H0W5 538 aaPredicted RBP20.24■□□□□ 0.83
TPM1-219ENST00000559397 SLC5A1P13866 664 aa20.23■□□□□ 0.83
TPM1-219ENST00000559397 ADORA1P30542 326 aa20.23■□□□□ 0.83
TPM1-219ENST00000559397 FKBP4Q02790 459 aaKnown RBP eCLIP20.23■□□□□ 0.83
TPM1-219ENST00000559397 C15orf52Q6ZUT6 534 aaKnown RBP20.23■□□□□ 0.83
TPM1-219ENST00000559397 XAGE2Q96GT9 111 aa20.23■□□□□ 0.83
TPM1-219ENST00000559397 IFIT1P09914 478 aaKnown RBP20.22■□□□□ 0.83
TPM1-219ENST00000559397 TTC22Q5TAA0 569 aa20.22■□□□□ 0.83
TPM1-219ENST00000559397 TXNRD3Q86VQ6 643 aa20.22■□□□□ 0.83
TPM1-219ENST00000559397 NEUROD6Q96NK8 337 aa20.22■□□□□ 0.83
TPM1-219ENST00000559397 BCL11AQ9H165 835 aa20.22■□□□□ 0.83
TPM1-219ENST00000559397 TLR7Q9NYK1 1049 aaKnown RBP20.22■□□□□ 0.83
TPM1-219ENST00000559397 DBNLQ9UJU6 430 aaKnown RBP20.22■□□□□ 0.83
TPM1-219ENST00000559397 MED23Q9ULK4 1368 aa20.22■□□□□ 0.83
TPM1-219ENST00000559397 SEC24BO95487 1268 aa20.22■□□□□ 0.83
TPM1-219ENST00000559397 GSPT1P15170 499 aaKnown RBP20.22■□□□□ 0.83
TPM1-219ENST00000559397 SUPT20HQ8NEM7 779 aa20.22■□□□□ 0.83
TPM1-219ENST00000559397 DBNDD2Q9BQY9 259 aa20.22■□□□□ 0.83
TPM1-219ENST00000559397 STAP2Q9UGK3 403 aa20.22■□□□□ 0.83
TPM1-219ENST00000559397 LTBP3Q9NS15 1303 aa20.22■□□□□ 0.83
TPM1-219ENST00000559397 IFIT2P09913 472 aaKnown RBP20.21■□□□□ 0.83
TPM1-219ENST00000559397 PDE1AP54750 535 aa20.21■□□□□ 0.83
TPM1-219ENST00000559397 EYA3Q99504 573 aa20.21■□□□□ 0.83
TPM1-219ENST00000559397 TAOK3Q9H2K8 898 aa20.21■□□□□ 0.83
TPM1-219ENST00000559397 WASHC4Q2M389 1173 aa20.2■□□□□ 0.82
TPM1-219ENST00000559397 FAM84BQ96KN1 310 aaPredicted RBP20.2■□□□□ 0.82
TPM1-219ENST00000559397 FBXO33Q7Z6M2 555 aa20.19■□□□□ 0.82
TPM1-219ENST00000559397 RIMBP2O15034 1052 aa20.19■□□□□ 0.82
TPM1-219ENST00000559397 GYG1P46976 350 aa20.19■□□□□ 0.82
TPM1-219ENST00000559397 RASSF7Q02833 373 aa20.19■□□□□ 0.82
TPM1-219ENST00000559397 GPR162Q16538 588 aa20.19■□□□□ 0.82
TPM1-219ENST00000559397 ARHGAP27Q6ZUM4 889 aa20.19■□□□□ 0.82
TPM1-219ENST00000559397 ZC3H12CQ9C0D7 883 aaKnown RBP20.19■□□□□ 0.82
TPM1-219ENST00000559397 VPS33BQ9H267 617 aa20.19■□□□□ 0.82
TPM1-219ENST00000559397 ZNF277Q9NRM2 450 aaPredicted RBP20.19■□□□□ 0.82
TPM1-219ENST00000559397 AOX1Q06278 1338 aa20.18■□□□□ 0.82
TPM1-219ENST00000559397 BCAMP50895 628 aa20.18■□□□□ 0.82
TPM1-219ENST00000559397 PRELPP51888 382 aa20.18■□□□□ 0.82
TPM1-219ENST00000559397 KIAA2012Q0VF49 1180 aa20.18■□□□□ 0.82
TPM1-219ENST00000559397 MX1P20591 662 aa20.17■□□□□ 0.82
TPM1-219ENST00000559397 ANP32AP39687 249 aaKnown RBP20.17■□□□□ 0.82
TPM1-219ENST00000559397 PHKA1P46020 1223 aa20.17■□□□□ 0.82
TPM1-219ENST00000559397 AOC3Q16853 763 aa20.17■□□□□ 0.82
TPM1-219ENST00000559397 CCDC102BQ68D86 513 aa20.17■□□□□ 0.82
TPM1-219ENST00000559397 HIBADHP31937 336 aaKnown RBP20.16■□□□□ 0.82
TPM1-219ENST00000559397 CAVIN4Q5BKX8 364 aa20.16■□□□□ 0.82
TPM1-219ENST00000559397 COL4A5P29400 1685 aa20.16■□□□□ 0.82
TPM1-219ENST00000559397 PPIP5K2O43314 1243 aa20.16■□□□□ 0.82
TPM1-219ENST00000559397 IARSP41252 1262 aaKnown RBP20.16■□□□□ 0.82
TPM1-219ENST00000559397 GORABQ5T7V8 394 aa20.16■□□□□ 0.82
TPM1-219ENST00000559397 SBF1O95248 1867 aa20.16■□□□□ 0.82
TPM1-219ENST00000559397 CCDC88AQ3V6T2 1871 aa20.16■□□□□ 0.82
TPM1-219ENST00000559397 ZBTB22O15209 634 aa20.15■□□□□ 0.82
TPM1-219ENST00000559397 GRIN3BO60391 1043 aa20.15■□□□□ 0.82
TPM1-219ENST00000559397 ZNF804AQ7Z570 1209 aa20.15■□□□□ 0.82
TPM1-219ENST00000559397 CD209Q9NNX6 404 aa20.15■□□□□ 0.82
TPM1-219ENST00000559397 SDSP20132 328 aa20.14■□□□□ 0.81
TPM1-219ENST00000559397 CCDC158Q5M9N0 1113 aa20.14■□□□□ 0.81
TPM1-219ENST00000559397 ZNF512BQ96KM6 892 aaPredicted RBP20.14■□□□□ 0.81
TPM1-219ENST00000559397 COA1Q9GZY4 146 aa20.14■□□□□ 0.81
TPM1-219ENST00000559397 ECHDC1Q9NTX5 307 aa20.14■□□□□ 0.81
TPM1-219ENST00000559397 CHD4Q14839 1912 aa20.14■□□□□ 0.81
TPM1-219ENST00000559397 TTC41PQ6P2S7 1318 aa20.14■□□□□ 0.81
TPM1-219ENST00000559397 CDC45O75419 566 aa20.13■□□□□ 0.81
TPM1-219ENST00000559397 IL1R1P14778 569 aa20.13■□□□□ 0.81
TPM1-219ENST00000559397 ARID4AP29374 1257 aaPredicted RBP20.13■□□□□ 0.81
TPM1-219ENST00000559397 DOK7Q18PE1 504 aa20.13■□□□□ 0.81
TPM1-219ENST00000559397 TTC39AQ5SRH9 613 aa20.13■□□□□ 0.81
TPM1-219ENST00000559397 TSHZ3Q63HK5 1081 aa20.13■□□□□ 0.81
TPM1-219ENST00000559397 VPS37DQ86XT2 251 aa20.13■□□□□ 0.81
TPM1-219ENST00000559397 AKAP11Q9UKA4 1901 aa20.13■□□□□ 0.81
TPM1-219ENST00000559397 TBC1D9Q6ZT07 1266 aa20.13■□□□□ 0.81
TPM1-219ENST00000559397 LARGE2Q8N3Y3 721 aa20.13■□□□□ 0.81
TPM1-219ENST00000559397 TDRD7Q8NHU6 1098 aaKnown RBP20.13■□□□□ 0.81
TPM1-219ENST00000559397 PI4K2BQ8TCG2 481 aa20.13■□□□□ 0.81
TPM1-219ENST00000559397 GPATCH3Q96I76 525 aa20.13■□□□□ 0.81
TPM1-219ENST00000559397 DICER1Q9UPY3 1922 aaKnown RBP20.12■□□□□ 0.81
TPM1-219ENST00000559397 ATP5JP18859 108 aa20.12■□□□□ 0.81
TPM1-219ENST00000559397 SCARF1Q14162 830 aa20.12■□□□□ 0.81
TPM1-219ENST00000559397 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.12■□□□□ 0.81
TPM1-219ENST00000559397 DBNDD1Q9H9R9 158 aa20.12■□□□□ 0.81
TPM1-219ENST00000559397 ECE2O60344 883 aa20.11■□□□□ 0.81
TPM1-219ENST00000559397 UQCRFS1P1P0C7P4 283 aa20.11■□□□□ 0.81
TPM1-219ENST00000559397 LMNB1P20700 586 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms