RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.59■■□□□ 1.05
TPM1-214ENST00000558544 ZNF646O15015 1829 aaPredicted RBP21.59■■□□□ 1.05
TPM1-214ENST00000558544 ZNF609O15014 1411 aa21.57■■□□□ 1.04
TPM1-214ENST00000558544 G3V3G9 751 aa21.57■■□□□ 1.04
TPM1-214ENST00000558544 FGFR2P21802 821 aa21.57■■□□□ 1.04
TPM1-214ENST00000558544 ATP2B3Q16720 1220 aa21.57■■□□□ 1.04
TPM1-214ENST00000558544 DCAF8Q5TAQ9 597 aa21.57■■□□□ 1.04
TPM1-214ENST00000558544 ECE2O60344 883 aa21.56■■□□□ 1.04
TPM1-214ENST00000558544 HSP90AB4PQ58FF6 505 aa21.56■■□□□ 1.04
TPM1-214ENST00000558544 C15orf52Q6ZUT6 534 aaKnown RBP21.56■■□□□ 1.04
TPM1-214ENST00000558544 LPIN2Q92539 896 aa21.56■■□□□ 1.04
TPM1-214ENST00000558544 ZC3H4Q9UPT8 1303 aaKnown RBP21.56■■□□□ 1.04
TPM1-214ENST00000558544 APBB1O00213 710 aa21.55■■□□□ 1.04
TPM1-214ENST00000558544 IFIT1P09914 478 aaKnown RBP21.55■■□□□ 1.04
TPM1-214ENST00000558544 SLC5A1P13866 664 aa21.55■■□□□ 1.04
TPM1-214ENST00000558544 ZNRF3Q9ULT6 936 aa21.55■■□□□ 1.04
TPM1-214ENST00000558544 ZNF541Q9H0D2 1346 aa21.55■■□□□ 1.04
TPM1-214ENST00000558544 YDJCA8MPS7 323 aa21.54■■□□□ 1.04
TPM1-214ENST00000558544 FZD9O00144 591 aa21.54■■□□□ 1.04
TPM1-214ENST00000558544 GYG1P46976 350 aa21.54■■□□□ 1.04
TPM1-214ENST00000558544 ZNF804AQ7Z570 1209 aa21.54■■□□□ 1.04
TPM1-214ENST00000558544 ERC1Q8IUD2 1116 aa21.54■■□□□ 1.04
TPM1-214ENST00000558544 A0A1B0GUL7 405 aa21.53■■□□□ 1.04
TPM1-214ENST00000558544 AKAP2Q9Y2D5 859 aa21.53■■□□□ 1.04
TPM1-214ENST00000558544 EIF6P56537 245 aaKnown RBP21.52■■□□□ 1.04
TPM1-214ENST00000558544 RHPN1Q8TCX5 695 aa21.52■■□□□ 1.04
TPM1-214ENST00000558544 FAM84BQ96KN1 310 aaPredicted RBP21.52■■□□□ 1.04
TPM1-214ENST00000558544 COA1Q9GZY4 146 aa21.52■■□□□ 1.04
TPM1-214ENST00000558544 DCTPP1Q9H773 170 aa21.52■■□□□ 1.04
TPM1-214ENST00000558544 RAB11FIP3O75154 756 aa21.51■■□□□ 1.03
TPM1-214ENST00000558544 RAD17O75943 681 aa21.51■■□□□ 1.03
TPM1-214ENST00000558544 NEFLP07196 543 aa21.51■■□□□ 1.03
TPM1-214ENST00000558544 YY1P25490 414 aa21.51■■□□□ 1.03
TPM1-214ENST00000558544 ADORA1P30542 326 aa21.51■■□□□ 1.03
TPM1-214ENST00000558544 TIMM10P62072 90 aa21.51■■□□□ 1.03
TPM1-214ENST00000558544 HDAC1Q13547 482 aaPredicted RBP21.51■■□□□ 1.03
TPM1-214ENST00000558544 TNNI3KQ59H18 835 aa21.51■■□□□ 1.03
TPM1-214ENST00000558544 KIF1BPQ96EK5 621 aa21.51■■□□□ 1.03
TPM1-214ENST00000558544 NEUROD6Q96NK8 337 aa21.51■■□□□ 1.03
TPM1-214ENST00000558544 CD209Q9NNX6 404 aa21.51■■□□□ 1.03
TPM1-214ENST00000558544 KCNQ5Q9NR82 932 aa21.51■■□□□ 1.03
TPM1-214ENST00000558544 FPGT-TNNI3KV9GXZ4 949 aa21.51■■□□□ 1.03
TPM1-214ENST00000558544 HIBADHP31937 336 aaKnown RBP21.5■■□□□ 1.03
TPM1-214ENST00000558544 CAVIN4Q5BKX8 364 aa21.5■■□□□ 1.03
TPM1-214ENST00000558544 PODNQ7Z5L7 613 aa21.5■■□□□ 1.03
TPM1-214ENST00000558544 VPS37DQ86XT2 251 aa21.5■■□□□ 1.03
TPM1-214ENST00000558544 IL1RAPL2Q9NP60 686 aa21.5■■□□□ 1.03
TPM1-214ENST00000558544 GPR108Q9NPR9 543 aa21.5■■□□□ 1.03
TPM1-214ENST00000558544 BCAMP50895 628 aa21.49■■□□□ 1.03
TPM1-214ENST00000558544 CXCL9Q07325 125 aa21.49■■□□□ 1.03
TPM1-214ENST00000558544 FBXO33Q7Z6M2 555 aa21.49■■□□□ 1.03
TPM1-214ENST00000558544 XAGE2Q96GT9 111 aa21.49■■□□□ 1.03
TPM1-214ENST00000558544 BCL11AQ9H165 835 aa21.49■■□□□ 1.03
TPM1-214ENST00000558544 WDR90Q96KV7 1748 aa21.49■■□□□ 1.03
TPM1-214ENST00000558544 CIAPIN1Q6FI81 312 aa21.48■■□□□ 1.03
TPM1-214ENST00000558544 DPY19L2Q6NUT2 758 aa21.48■■□□□ 1.03
TPM1-214ENST00000558544 GJA3Q9Y6H8 435 aa21.48■■□□□ 1.03
TPM1-214ENST00000558544 GLTPD2A6NH11 291 aa21.48■■□□□ 1.03
TPM1-214ENST00000558544 DDNO94850 711 aaPredicted RBP21.48■■□□□ 1.03
TPM1-214ENST00000558544 IL1R1P14778 569 aa21.48■■□□□ 1.03
TPM1-214ENST00000558544 ZNF526Q8TF50 670 aaPredicted RBP21.48■■□□□ 1.03
TPM1-214ENST00000558544 FBXW7Q969H0 707 aa21.48■■□□□ 1.03
TPM1-214ENST00000558544 EAF2Q96CJ1 260 aaPredicted RBP21.48■■□□□ 1.03
TPM1-214ENST00000558544 LRRCC1Q9C099 1032 aa21.48■■□□□ 1.03
TPM1-214ENST00000558544 RWDD1Q9H446 243 aaPredicted RBP21.48■■□□□ 1.03
TPM1-214ENST00000558544 IQSEC3Q9UPP2 1182 aaPredicted RBP21.48■■□□□ 1.03
TPM1-214ENST00000558544 SCN4AP35499 1836 aa21.47■■□□□ 1.03
TPM1-214ENST00000558544 PSMD14O00487 310 aa21.47■■□□□ 1.03
TPM1-214ENST00000558544 SMARCA5O60264 1052 aaPredicted RBP21.47■■□□□ 1.03
TPM1-214ENST00000558544 IGHDP01880 384 aa21.47■■□□□ 1.03
TPM1-214ENST00000558544 PHKA1P46020 1223 aa21.47■■□□□ 1.03
TPM1-214ENST00000558544 AACSQ86V21 672 aa21.47■■□□□ 1.03
TPM1-214ENST00000558544 CCDC8Q9H0W5 538 aaPredicted RBP21.47■■□□□ 1.03
TPM1-214ENST00000558544 TLR7Q9NYK1 1049 aaKnown RBP21.47■■□□□ 1.03
TPM1-214ENST00000558544 TNIP1Q15025 636 aa21.46■■□□□ 1.03
TPM1-214ENST00000558544 GPC2Q8N158 579 aa21.46■■□□□ 1.03
TPM1-214ENST00000558544 CLASRPQ8N2M8 674 aaKnown RBP21.46■■□□□ 1.03
TPM1-214ENST00000558544 TDRD7Q8NHU6 1098 aaKnown RBP21.46■■□□□ 1.03
TPM1-214ENST00000558544 DBNDD2Q9BQY9 259 aa21.46■■□□□ 1.03
TPM1-214ENST00000558544 JAG2Q9Y219 1238 aa21.46■■□□□ 1.03
TPM1-214ENST00000558544 AKAP11Q9UKA4 1901 aa21.45■■□□□ 1.02
TPM1-214ENST00000558544 KDM2BQ8NHM5 1336 aa21.45■■□□□ 1.02
TPM1-214ENST00000558544 USP17L3A6NCW0 530 aa21.45■■□□□ 1.02
TPM1-214ENST00000558544 USP17L4A6NCW7 530 aa21.45■■□□□ 1.02
TPM1-214ENST00000558544 GTF2IP78347 998 aa21.45■■□□□ 1.02
TPM1-214ENST00000558544 GORABQ5T7V8 394 aa21.45■■□□□ 1.02
TPM1-214ENST00000558544 CCDC102BQ68D86 513 aa21.45■■□□□ 1.02
TPM1-214ENST00000558544 USP17L1Q7RTZ2 530 aa21.45■■□□□ 1.02
TPM1-214ENST00000558544 COL1A1P02452 1464 aaPredicted RBP21.44■■□□□ 1.02
TPM1-214ENST00000558544 FRAT2O75474 233 aaPredicted RBP21.44■■□□□ 1.02
TPM1-214ENST00000558544 GCC1Q96CN9 775 aa21.44■■□□□ 1.02
TPM1-214ENST00000558544 DBNLQ9UJU6 430 aaKnown RBP21.44■■□□□ 1.02
TPM1-214ENST00000558544 TTLL5Q6EMB2 1281 aa21.43■■□□□ 1.02
TPM1-214ENST00000558544 MXD3Q9BW11 206 aa21.43■■□□□ 1.02
TPM1-214ENST00000558544 GNL3LQ9NVN8 582 aaKnown RBP21.43■■□□□ 1.02
TPM1-214ENST00000558544 ZBTB12Q9Y330 459 aaPredicted RBP21.43■■□□□ 1.02
TPM1-214ENST00000558544 VIL1P09327 827 aaKnown RBP21.42■■□□□ 1.02
TPM1-214ENST00000558544 CHAF1AQ13111 956 aaPredicted RBP21.42■■□□□ 1.02
TPM1-214ENST00000558544 DACT2Q5SW24 774 aa21.42■■□□□ 1.02
TPM1-214ENST00000558544 STRIP1Q5VSL9 837 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms