RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 DACT2Q5SW24 774 aa13.64□□□□□ -0.23
TRAV33-201ENST00000557514 APOBEC3FQ8IUX4 373 aaKnown RBP13.64□□□□□ -0.23
TRAV33-201ENST00000557514 WNK4Q96J92 1243 aa13.64□□□□□ -0.23
TRAV33-201ENST00000557514 PLEKHF1Q96S99 279 aa13.64□□□□□ -0.23
TRAV33-201ENST00000557514 RBM27Q9P2N5 1060 aaKnown RBP13.64□□□□□ -0.23
TRAV33-201ENST00000557514 ANGEL1Q9UNK9 670 aaKnown RBP13.64□□□□□ -0.23
TRAV33-201ENST00000557514 UNC80Q8N2C7 3258 aa13.64□□□□□ -0.23
TRAV33-201ENST00000557514 XDHP47989 1333 aa13.64□□□□□ -0.23
TRAV33-201ENST00000557514 NEFMP07197 916 aa13.63□□□□□ -0.23
TRAV33-201ENST00000557514 OGFOD1Q8N543 542 aa13.63□□□□□ -0.23
TRAV33-201ENST00000557514 PLBD2Q8NHP8 589 aa13.63□□□□□ -0.23
TRAV33-201ENST00000557514 PRO3102Q9H379 93 aa13.63□□□□□ -0.23
TRAV33-201ENST00000557514 SEC31BQ9NQW1 1179 aa13.63□□□□□ -0.23
TRAV33-201ENST00000557514 MYO3BQ8WXR4 1341 aa13.63□□□□□ -0.23
TRAV33-201ENST00000557514 MED23Q9ULK4 1368 aa13.62□□□□□ -0.23
TRAV33-201ENST00000557514 SP3Q02447 781 aa13.62□□□□□ -0.23
TRAV33-201ENST00000557514 SLC9C1Q4G0N8 1177 aa13.62□□□□□ -0.23
TRAV33-201ENST00000557514 ZBED3Q96IU2 234 aaPredicted RBP13.62□□□□□ -0.23
TRAV33-201ENST00000557514 CLMNQ96JQ2 1002 aa13.62□□□□□ -0.23
TRAV33-201ENST00000557514 MXD3Q9BW11 206 aa13.62□□□□□ -0.23
TRAV33-201ENST00000557514 BABAM1Q9NWV8 329 aa13.62□□□□□ -0.23
TRAV33-201ENST00000557514 FZD1Q9UP38 647 aa13.62□□□□□ -0.23
TRAV33-201ENST00000557514 PTCH2Q9Y6C5 1203 aa13.62□□□□□ -0.23
TRAV33-201ENST00000557514 ATP5J2-PTCD1G3V325 749 aa13.61□□□□□ -0.23
TRAV33-201ENST00000557514 MMP14P50281 582 aa13.61□□□□□ -0.23
TRAV33-201ENST00000557514 TRIM28Q13263 835 aaKnown RBP13.61□□□□□ -0.23
TRAV33-201ENST00000557514 RTL5Q5HYW3 569 aaPredicted RBP13.61□□□□□ -0.23
TRAV33-201ENST00000557514 SLC10A4Q96EP9 437 aa13.61□□□□□ -0.23
TRAV33-201ENST00000557514 PSME4Q14997 1843 aa13.61□□□□□ -0.23
TRAV33-201ENST00000557514 VCANP13611 3396 aa13.6□□□□□ -0.23
TRAV33-201ENST00000557514 TESPA1A2RU30 521 aaPredicted RBP13.6□□□□□ -0.23
TRAV33-201ENST00000557514 UNCXA6NJT0 531 aa13.6□□□□□ -0.23
TRAV33-201ENST00000557514 ATP2B4P23634 1241 aa13.6□□□□□ -0.23
TRAV33-201ENST00000557514 GJA5P36382 358 aa13.6□□□□□ -0.23
TRAV33-201ENST00000557514 SLC4A8Q2Y0W8 1093 aa13.6□□□□□ -0.23
TRAV33-201ENST00000557514 STRIP1Q5VSL9 837 aa13.6□□□□□ -0.23
TRAV33-201ENST00000557514 NBPF11Q86T75 865 aa13.6□□□□□ -0.23
TRAV33-201ENST00000557514 PTPN18Q99952 460 aa13.6□□□□□ -0.23
TRAV33-201ENST00000557514 CHPF2Q9P2E5 772 aa13.6□□□□□ -0.23
TRAV33-201ENST00000557514 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
TRAV33-201ENST00000557514 OTUD7BQ6GQQ9 843 aa13.59□□□□□ -0.23
TRAV33-201ENST00000557514 ANKRD13DQ6ZTN6 518 aa13.59□□□□□ -0.23
TRAV33-201ENST00000557514 SHISA4Q96DD7 197 aa13.59□□□□□ -0.23
TRAV33-201ENST00000557514 DEFB129Q9H1M3 183 aa13.59□□□□□ -0.23
TRAV33-201ENST00000557514 CCDC152Q4G0S7 254 aa13.58□□□□□ -0.24
TRAV33-201ENST00000557514 ZBTB38Q8NAP3 1195 aaPredicted RBP13.58□□□□□ -0.24
TRAV33-201ENST00000557514 PPP2R3BQ9Y5P8 575 aa13.58□□□□□ -0.24
TRAV33-201ENST00000557514 LAMB1P07942 1786 aa13.58□□□□□ -0.24
TRAV33-201ENST00000557514 WTIPA6NIX2 430 aaPredicted RBP13.57□□□□□ -0.24
TRAV33-201ENST00000557514 PPP1R12BO60237 982 aaPredicted RBP13.57□□□□□ -0.24
TRAV33-201ENST00000557514 HSP90B1P14625 803 aaKnown RBP13.57□□□□□ -0.24
TRAV33-201ENST00000557514 KRT24Q2M2I5 525 aa13.57□□□□□ -0.24
TRAV33-201ENST00000557514 ARHGEF6Q15052 776 aa13.56□□□□□ -0.24
TRAV33-201ENST00000557514 UBE2Q1Q7Z7E8 422 aa13.56□□□□□ -0.24
TRAV33-201ENST00000557514 ANKRD18AQ8IVF6 992 aa13.56□□□□□ -0.24
TRAV33-201ENST00000557514 MAPK8IP3Q9UPT6 1336 aa13.56□□□□□ -0.24
TRAV33-201ENST00000557514 ZNF646O15015 1829 aaPredicted RBP13.55□□□□□ -0.24
TRAV33-201ENST00000557514 DLG5Q8TDM6 1919 aa13.55□□□□□ -0.24
TRAV33-201ENST00000557514 A0A1W2PPC1 479 aa13.55□□□□□ -0.24
TRAV33-201ENST00000557514 MYCP01106 439 aaPredicted RBP13.55□□□□□ -0.24
TRAV33-201ENST00000557514 HDGFL1Q5TGJ6 251 aa13.55□□□□□ -0.24
TRAV33-201ENST00000557514 KIAA0825Q8IV33 1275 aa13.55□□□□□ -0.24
TRAV33-201ENST00000557514 SH3TC2Q8TF17 1288 aa13.55□□□□□ -0.24
TRAV33-201ENST00000557514 MS4A4AQ96JQ5 239 aa13.55□□□□□ -0.24
TRAV33-201ENST00000557514 COA1Q9GZY4 146 aa13.55□□□□□ -0.24
TRAV33-201ENST00000557514 ZNF804BA4D1E1 1349 aa13.55□□□□□ -0.24
TRAV33-201ENST00000557514 HOXB7P09629 217 aa13.54□□□□□ -0.24
TRAV33-201ENST00000557514 TRIM26Q12899 539 aaPredicted RBP13.54□□□□□ -0.24
TRAV33-201ENST00000557514 BRI3BPQ8WY22 251 aa13.54□□□□□ -0.24
TRAV33-201ENST00000557514 FBXW7Q969H0 707 aa13.54□□□□□ -0.24
TRAV33-201ENST00000557514 DBF4Q9UBU7 674 aaPredicted RBP13.54□□□□□ -0.24
TRAV33-201ENST00000557514 SOX1O00570 391 aaPredicted RBP13.53□□□□□ -0.24
TRAV33-201ENST00000557514 PDE8AO60658 829 aa13.53□□□□□ -0.24
TRAV33-201ENST00000557514 IREB2P48200 963 aaKnown RBP13.53□□□□□ -0.24
TRAV33-201ENST00000557514 ANKRD13AQ8IZ07 590 aa13.53□□□□□ -0.24
TRAV33-201ENST00000557514 MTMR14Q8NCE2 650 aa13.53□□□□□ -0.24
TRAV33-201ENST00000557514 DPF3Q92784 378 aa13.53□□□□□ -0.24
TRAV33-201ENST00000557514 CCDC85AQ96PX6 553 aaPredicted RBP13.53□□□□□ -0.24
TRAV33-201ENST00000557514 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.53□□□□□ -0.24
TRAV33-201ENST00000557514 SPTBN5Q9NRC6 3674 aaKnown RBP13.52□□□□□ -0.24
TRAV33-201ENST00000557514 PCCAP05165 728 aaPredicted RBP13.52□□□□□ -0.25
TRAV33-201ENST00000557514 CCT4P50991 539 aaKnown RBP13.52□□□□□ -0.25
TRAV33-201ENST00000557514 TAF1CQ15572 869 aaPredicted RBP13.52□□□□□ -0.25
TRAV33-201ENST00000557514 SUPT20HL1Q3ZLR7 823 aa13.52□□□□□ -0.25
TRAV33-201ENST00000557514 TTLL5Q6EMB2 1281 aa13.52□□□□□ -0.25
TRAV33-201ENST00000557514 TXNRD3Q86VQ6 643 aa13.52□□□□□ -0.25
TRAV33-201ENST00000557514 OPTNQ96CV9 577 aa13.52□□□□□ -0.25
TRAV33-201ENST00000557514 CDC5LQ99459 802 aaKnown RBP13.52□□□□□ -0.25
TRAV33-201ENST00000557514 ZFYVE28Q9HCC9 887 aa13.52□□□□□ -0.25
TRAV33-201ENST00000557514 BSDC1Q9NW68 430 aaPredicted RBP13.52□□□□□ -0.25
TRAV33-201ENST00000557514 MINPP1Q9UNW1 487 aa13.52□□□□□ -0.25
TRAV33-201ENST00000557514 CHL1O00533 1208 aa13.51□□□□□ -0.25
TRAV33-201ENST00000557514 USP2O75604 605 aaPredicted RBP13.51□□□□□ -0.25
TRAV33-201ENST00000557514 DLGAP5Q15398 846 aa13.51□□□□□ -0.25
TRAV33-201ENST00000557514 NBPF12Q5TAG4 269 aaPredicted RBP13.51□□□□□ -0.25
TRAV33-201ENST00000557514 CCDC191Q8NCU4 936 aa13.51□□□□□ -0.25
TRAV33-201ENST00000557514 LRCH3Q96II8 777 aa13.51□□□□□ -0.25
TRAV33-201ENST00000557514 HTATIP2Q9BUP3 242 aa13.51□□□□□ -0.25
TRAV33-201ENST00000557514 PCGF6Q9BYE7 350 aa13.51□□□□□ -0.25
TRAV33-201ENST00000557514 ARHGAP39Q9C0H5 1083 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms