RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ZNF280AP59817 542 aaPredicted RBP18.01■□□□□ 0.47
SNX6-210ENST00000557341 BEND3Q5T5X7 828 aa18.01■□□□□ 0.47
SNX6-210ENST00000557341 BEGAINQ9BUH8 593 aa18.01■□□□□ 0.47
SNX6-210ENST00000557341 ANKRD2Q9GZV1 360 aa18.01■□□□□ 0.47
SNX6-210ENST00000557341 ZNF804BA4D1E1 1349 aa18■□□□□ 0.47
SNX6-210ENST00000557341 ZNF521Q96K83 1311 aa18■□□□□ 0.47
SNX6-210ENST00000557341 ANKRD18BA2A2Z9 1011 aa18■□□□□ 0.47
SNX6-210ENST00000557341 WTIPA6NIX2 430 aaPredicted RBP18■□□□□ 0.47
SNX6-210ENST00000557341 ADM5C9JUS6 153 aa18■□□□□ 0.47
SNX6-210ENST00000557341 CAPN15O75808 1086 aa18■□□□□ 0.47
SNX6-210ENST00000557341 HSPA8P11142 646 aaKnown RBP18■□□□□ 0.47
SNX6-210ENST00000557341 MAP2K2P36507 400 aa18■□□□□ 0.47
SNX6-210ENST00000557341 LBX1P52954 281 aa18■□□□□ 0.47
SNX6-210ENST00000557341 SULF1Q8IWU6 871 aa18■□□□□ 0.47
SNX6-210ENST00000557341 COA1Q9GZY4 146 aa18■□□□□ 0.47
SNX6-210ENST00000557341 MYO3BQ8WXR4 1341 aa17.99■□□□□ 0.47
SNX6-210ENST00000557341 AOC2O75106 756 aa17.99■□□□□ 0.47
SNX6-210ENST00000557341 USP17L8P0C7I0 530 aa17.99■□□□□ 0.47
SNX6-210ENST00000557341 GMLQ99445 158 aa17.99■□□□□ 0.47
SNX6-210ENST00000557341 MYOZ2Q9NPC6 264 aa17.99■□□□□ 0.47
SNX6-210ENST00000557341 CHMP3Q9Y3E7 222 aa17.99■□□□□ 0.47
SNX6-210ENST00000557341 MYH13Q9UKX3 1938 aa17.98■□□□□ 0.47
SNX6-210ENST00000557341 GRM8O00222 908 aa17.98■□□□□ 0.47
SNX6-210ENST00000557341 KCNJ4P48050 445 aa17.98■□□□□ 0.47
SNX6-210ENST00000557341 HUNKP57058 714 aa17.98■□□□□ 0.47
SNX6-210ENST00000557341 IFIT5Q13325 482 aaKnown RBP17.98■□□□□ 0.47
SNX6-210ENST00000557341 DLK2Q6UY11 383 aa17.98■□□□□ 0.47
SNX6-210ENST00000557341 FBXW7Q969H0 707 aa17.98■□□□□ 0.47
SNX6-210ENST00000557341 GBA2Q9HCG7 927 aaPredicted RBP17.98■□□□□ 0.47
SNX6-210ENST00000557341 CASP8AP2Q9UKL3 1982 aa17.98■□□□□ 0.47
SNX6-210ENST00000557341 ASTN2O75129 1339 aaPredicted RBP17.98■□□□□ 0.47
SNX6-210ENST00000557341 PITPNM2Q9BZ72 1349 aa17.98■□□□□ 0.47
SNX6-210ENST00000557341 FOXO4P98177 505 aa17.97■□□□□ 0.47
SNX6-210ENST00000557341 CHRNDQ07001 517 aa17.97■□□□□ 0.47
SNX6-210ENST00000557341 DACT2Q5SW24 774 aa17.97■□□□□ 0.47
SNX6-210ENST00000557341 STRIP1Q5VSL9 837 aa17.97■□□□□ 0.47
SNX6-210ENST00000557341 ANGEL2Q5VTE6 544 aaKnown RBP17.97■□□□□ 0.47
SNX6-210ENST00000557341 TXNRD3Q86VQ6 643 aa17.97■□□□□ 0.47
SNX6-210ENST00000557341 C2orf69Q8N8R5 385 aa17.97■□□□□ 0.47
SNX6-210ENST00000557341 KLRK1P26718 216 aa17.96■□□□□ 0.47
SNX6-210ENST00000557341 BRPF1P55201 1214 aaPredicted RBP17.96■□□□□ 0.47
SNX6-210ENST00000557341 SCARF1Q14162 830 aa17.96■□□□□ 0.47
SNX6-210ENST00000557341 SLC4A10Q6U841 1118 aa17.96■□□□□ 0.47
SNX6-210ENST00000557341 C9orf78Q9NZ63 289 aaPredicted RBP17.96■□□□□ 0.47
SNX6-210ENST00000557341 ALDH1L1O75891 902 aa17.95■□□□□ 0.46
SNX6-210ENST00000557341 NOGQ13253 232 aa17.95■□□□□ 0.46
SNX6-210ENST00000557341 OGFOD1Q8N543 542 aa17.95■□□□□ 0.46
SNX6-210ENST00000557341 CDCA5Q96FF9 252 aa17.95■□□□□ 0.46
SNX6-210ENST00000557341 SRCIN1Q9C0H9 1055 aa17.95■□□□□ 0.46
SNX6-210ENST00000557341 CA12O43570 354 aa17.94■□□□□ 0.46
SNX6-210ENST00000557341 CCDC57Q2TAC2 916 aa17.94■□□□□ 0.46
SNX6-210ENST00000557341 TAF7LQ5H9L4 462 aa17.94■□□□□ 0.46
SNX6-210ENST00000557341 RGMBQ6NW40 437 aa17.94■□□□□ 0.46
SNX6-210ENST00000557341 LMBR1LQ6UX01 489 aa17.94■□□□□ 0.46
SNX6-210ENST00000557341 MXD3Q9BW11 206 aa17.94■□□□□ 0.46
SNX6-210ENST00000557341 E9PSI1 815 aa17.93■□□□□ 0.46
SNX6-210ENST00000557341 MMP14P50281 582 aa17.93■□□□□ 0.46
SNX6-210ENST00000557341 EPHA10Q5JZY3 1008 aa17.93■□□□□ 0.46
SNX6-210ENST00000557341 TTLL5Q6EMB2 1281 aa17.93■□□□□ 0.46
SNX6-210ENST00000557341 LAMB1P07942 1786 aa17.93■□□□□ 0.46
SNX6-210ENST00000557341 TAF5LO75529 589 aa17.92■□□□□ 0.46
SNX6-210ENST00000557341 IRS2Q9Y4H2 1338 aa17.92■□□□□ 0.46
SNX6-210ENST00000557341 GTF2IP78347 998 aa17.91■□□□□ 0.46
SNX6-210ENST00000557341 NBPF9Q3BBW0 867 aa17.91■□□□□ 0.46
SNX6-210ENST00000557341 LDHAL6AQ6ZMR3 332 aa17.91■□□□□ 0.46
SNX6-210ENST00000557341 C15orf52Q6ZUT6 534 aaKnown RBP17.91■□□□□ 0.46
SNX6-210ENST00000557341 HELBQ8NG08 1087 aaPredicted RBP17.91■□□□□ 0.46
SNX6-210ENST00000557341 CCDC102AQ96A19 550 aa17.91■□□□□ 0.46
SNX6-210ENST00000557341 CD209Q9NNX6 404 aa17.91■□□□□ 0.46
SNX6-210ENST00000557341 CNNM1Q9NRU3 951 aa17.91■□□□□ 0.46
SNX6-210ENST00000557341 HDAC9Q9UKV0 1011 aa17.91■□□□□ 0.46
SNX6-210ENST00000557341 PTPRCP08575 1304 aa17.91■□□□□ 0.46
SNX6-210ENST00000557341 COL1A1P02452 1464 aaPredicted RBP17.9■□□□□ 0.46
SNX6-210ENST00000557341 FAM155AB1AL88 458 aaPredicted RBP17.9■□□□□ 0.46
SNX6-210ENST00000557341 WNT10BO00744 389 aa17.9■□□□□ 0.46
SNX6-210ENST00000557341 ZNF157P51786 506 aaPredicted RBP17.9■□□□□ 0.46
SNX6-210ENST00000557341 ZNF804AQ7Z570 1209 aa17.9■□□□□ 0.46
SNX6-210ENST00000557341 KIAA0825Q8IV33 1275 aa17.9■□□□□ 0.46
SNX6-210ENST00000557341 ZNF594Q96JF6 807 aaPredicted RBP17.9■□□□□ 0.46
SNX6-210ENST00000557341 TSKSQ9UJT2 592 aa17.9■□□□□ 0.46
SNX6-210ENST00000557341 SNAP23O00161 211 aa17.89■□□□□ 0.45
SNX6-210ENST00000557341 SASH1O94885 1247 aa17.89■□□□□ 0.45
SNX6-210ENST00000557341 FKBP1BP68106 108 aa17.89■□□□□ 0.45
SNX6-210ENST00000557341 MRPL50Q8N5N7 158 aaKnown RBP17.89■□□□□ 0.45
SNX6-210ENST00000557341 SUCLG2Q96I99 432 aa17.89■□□□□ 0.45
SNX6-210ENST00000557341 UTYO14607 1347 aa17.89■□□□□ 0.45
SNX6-210ENST00000557341 SLC10A3P09131 477 aa17.88■□□□□ 0.45
SNX6-210ENST00000557341 NBPF7P0C2Y1 421 aaPredicted RBP17.88■□□□□ 0.45
SNX6-210ENST00000557341 ZIC5Q96T25 663 aa17.88■□□□□ 0.45
SNX6-210ENST00000557341 SCAF8Q9UPN6 1271 aaKnown RBP17.88■□□□□ 0.45
SNX6-210ENST00000557341 PLIN1O60240 522 aa17.87■□□□□ 0.45
SNX6-210ENST00000557341 IL1R1P14778 569 aa17.87■□□□□ 0.45
SNX6-210ENST00000557341 SLFN5Q08AF3 891 aa17.87■□□□□ 0.45
SNX6-210ENST00000557341 APOBEC3FQ8IUX4 373 aaKnown RBP17.87■□□□□ 0.45
SNX6-210ENST00000557341 OTOFQ9HC10 1997 aa17.87■□□□□ 0.45
SNX6-210ENST00000557341 NF2P35240 595 aa17.86■□□□□ 0.45
SNX6-210ENST00000557341 SSH1Q8WYL5 1049 aa17.86■□□□□ 0.45
SNX6-210ENST00000557341 KAZALD1Q96I82 304 aa17.86■□□□□ 0.45
SNX6-210ENST00000557341 FKBP1AP62942 108 aaKnown RBP17.85■□□□□ 0.45
SNX6-210ENST00000557341 KIF23Q02241 960 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms