RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 KLRK1P26718 216 aa17.47■□□□□ 0.39
SNX6-206ENST00000556162 DCTPP1Q9H773 170 aa17.47■□□□□ 0.39
SNX6-206ENST00000556162 ZNRF3Q9ULT6 936 aa17.47■□□□□ 0.39
SNX6-206ENST00000556162 HDAC1Q13547 482 aaPredicted RBP17.46■□□□□ 0.39
SNX6-206ENST00000556162 RWDD1Q9H446 243 aaPredicted RBP17.46■□□□□ 0.39
SNX6-206ENST00000556162 DBNDD1Q9H9R9 158 aa17.46■□□□□ 0.39
SNX6-206ENST00000556162 ZC3H4Q9UPT8 1303 aaKnown RBP17.46■□□□□ 0.39
SNX6-206ENST00000556162 APBB1O00213 710 aa17.46■□□□□ 0.38
SNX6-206ENST00000556162 TIMM10P62072 90 aa17.46■□□□□ 0.38
SNX6-206ENST00000556162 CAVIN4Q5BKX8 364 aa17.46■□□□□ 0.38
SNX6-206ENST00000556162 ZNF804AQ7Z570 1209 aa17.46■□□□□ 0.38
SNX6-206ENST00000556162 KIF1BPQ96EK5 621 aa17.46■□□□□ 0.38
SNX6-206ENST00000556162 COA1Q9GZY4 146 aa17.46■□□□□ 0.38
SNX6-206ENST00000556162 CCDC88AQ3V6T2 1871 aa17.45■□□□□ 0.38
SNX6-206ENST00000556162 FZD9O00144 591 aa17.45■□□□□ 0.38
SNX6-206ENST00000556162 ECE2O60344 883 aa17.45■□□□□ 0.38
SNX6-206ENST00000556162 EIF6P56537 245 aaKnown RBP17.45■□□□□ 0.38
SNX6-206ENST00000556162 PODNQ7Z5L7 613 aa17.45■□□□□ 0.38
SNX6-206ENST00000556162 VPS37DQ86XT2 251 aa17.45■□□□□ 0.38
SNX6-206ENST00000556162 RHPN1Q8TCX5 695 aa17.45■□□□□ 0.38
SNX6-206ENST00000556162 NEUROD6Q96NK8 337 aa17.45■□□□□ 0.38
SNX6-206ENST00000556162 GPR108Q9NPR9 543 aa17.45■□□□□ 0.38
SNX6-206ENST00000556162 IRS2Q9Y4H2 1338 aa17.44■□□□□ 0.38
SNX6-206ENST00000556162 A0A1B0GUL7 405 aa17.44■□□□□ 0.38
SNX6-206ENST00000556162 HIBADHP31937 336 aaKnown RBP17.44■□□□□ 0.38
SNX6-206ENST00000556162 GYG1P46976 350 aa17.44■□□□□ 0.38
SNX6-206ENST00000556162 FAM84BQ96KN1 310 aaPredicted RBP17.44■□□□□ 0.38
SNX6-206ENST00000556162 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.44■□□□□ 0.38
SNX6-206ENST00000556162 DPY19L2Q6NUT2 758 aa17.44■□□□□ 0.38
SNX6-206ENST00000556162 CHD4Q14839 1912 aa17.43■□□□□ 0.38
SNX6-206ENST00000556162 A0A1B0GUL6 1792 aa17.43■□□□□ 0.38
SNX6-206ENST00000556162 TNNI3KQ59H18 835 aa17.43■□□□□ 0.38
SNX6-206ENST00000556162 CD209Q9NNX6 404 aa17.43■□□□□ 0.38
SNX6-206ENST00000556162 FPGT-TNNI3KV9GXZ4 949 aa17.43■□□□□ 0.38
SNX6-206ENST00000556162 COL4A5P29400 1685 aa17.43■□□□□ 0.38
SNX6-206ENST00000556162 YDJCA8MPS7 323 aa17.42■□□□□ 0.38
SNX6-206ENST00000556162 BCAMP50895 628 aa17.42■□□□□ 0.38
SNX6-206ENST00000556162 FBXO33Q7Z6M2 555 aa17.42■□□□□ 0.38
SNX6-206ENST00000556162 CLASRPQ8N2M8 674 aaKnown RBP17.42■□□□□ 0.38
SNX6-206ENST00000556162 GCC1Q96CN9 775 aa17.42■□□□□ 0.38
SNX6-206ENST00000556162 XAGE2Q96GT9 111 aa17.42■□□□□ 0.38
SNX6-206ENST00000556162 LRRCC1Q9C099 1032 aa17.42■□□□□ 0.38
SNX6-206ENST00000556162 IL1RAPL2Q9NP60 686 aa17.42■□□□□ 0.38
SNX6-206ENST00000556162 DICER1Q9UPY3 1922 aaKnown RBP17.42■□□□□ 0.38
SNX6-206ENST00000556162 GORABQ5T7V8 394 aa17.41■□□□□ 0.38
SNX6-206ENST00000556162 RAD17O75943 681 aa17.41■□□□□ 0.38
SNX6-206ENST00000556162 IL1R1P14778 569 aa17.41■□□□□ 0.38
SNX6-206ENST00000556162 ADORA1P30542 326 aa17.41■□□□□ 0.38
SNX6-206ENST00000556162 CXCL9Q07325 125 aa17.41■□□□□ 0.38
SNX6-206ENST00000556162 TNIP1Q15025 636 aa17.41■□□□□ 0.38
SNX6-206ENST00000556162 BCL11AQ9H165 835 aa17.41■□□□□ 0.38
SNX6-206ENST00000556162 FRAT2O75474 233 aaPredicted RBP17.4■□□□□ 0.38
SNX6-206ENST00000556162 IGHDP01880 384 aa17.4■□□□□ 0.38
SNX6-206ENST00000556162 YY1P25490 414 aa17.4■□□□□ 0.38
SNX6-206ENST00000556162 CIAPIN1Q6FI81 312 aa17.4■□□□□ 0.38
SNX6-206ENST00000556162 EAF2Q96CJ1 260 aaPredicted RBP17.4■□□□□ 0.38
SNX6-206ENST00000556162 KCNQ5Q9NR82 932 aa17.4■□□□□ 0.38
SNX6-206ENST00000556162 GNL3LQ9NVN8 582 aaKnown RBP17.4■□□□□ 0.38
SNX6-206ENST00000556162 ZNF609O15014 1411 aa17.39■□□□□ 0.38
SNX6-206ENST00000556162 GLTPD2A6NH11 291 aa17.39■□□□□ 0.38
SNX6-206ENST00000556162 AACSQ86V21 672 aa17.39■□□□□ 0.38
SNX6-206ENST00000556162 TDRD7Q8NHU6 1098 aaKnown RBP17.39■□□□□ 0.38
SNX6-206ENST00000556162 CCDC8Q9H0W5 538 aaPredicted RBP17.39■□□□□ 0.38
SNX6-206ENST00000556162 ZBTB47Q9UFB7 747 aaPredicted RBP17.39■□□□□ 0.38
SNX6-206ENST00000556162 GJA3Q9Y6H8 435 aa17.39■□□□□ 0.38
SNX6-206ENST00000556162 ZNF541Q9H0D2 1346 aa17.39■□□□□ 0.37
SNX6-206ENST00000556162 USP17L3A6NCW0 530 aa17.39■□□□□ 0.37
SNX6-206ENST00000556162 USP17L4A6NCW7 530 aa17.39■□□□□ 0.37
SNX6-206ENST00000556162 CCDC102BQ68D86 513 aa17.39■□□□□ 0.37
SNX6-206ENST00000556162 USP17L1Q7RTZ2 530 aa17.39■□□□□ 0.37
SNX6-206ENST00000556162 GPC2Q8N158 579 aa17.39■□□□□ 0.37
SNX6-206ENST00000556162 SMARCA5O60264 1052 aaPredicted RBP17.38■□□□□ 0.37
SNX6-206ENST00000556162 DDNO94850 711 aaPredicted RBP17.38■□□□□ 0.37
SNX6-206ENST00000556162 IFIT2P09913 472 aaKnown RBP17.38■□□□□ 0.37
SNX6-206ENST00000556162 TTLL5Q6EMB2 1281 aa17.38■□□□□ 0.37
SNX6-206ENST00000556162 FBXW7Q969H0 707 aa17.38■□□□□ 0.37
SNX6-206ENST00000556162 DBNDD2Q9BQY9 259 aa17.38■□□□□ 0.37
SNX6-206ENST00000556162 PSMD14O00487 310 aa17.37■□□□□ 0.37
SNX6-206ENST00000556162 PHKA1P46020 1223 aa17.37■□□□□ 0.37
SNX6-206ENST00000556162 GTF2IP78347 998 aa17.37■□□□□ 0.37
SNX6-206ENST00000556162 CCDC158Q5M9N0 1113 aa17.37■□□□□ 0.37
SNX6-206ENST00000556162 STRIP1Q5VSL9 837 aa17.37■□□□□ 0.37
SNX6-206ENST00000556162 IQSEC3Q9UPP2 1182 aaPredicted RBP17.37■□□□□ 0.37
SNX6-206ENST00000556162 KDM2BQ8NHM5 1336 aa17.37■□□□□ 0.37
SNX6-206ENST00000556162 TIAM2Q8IVF5 1701 aa17.37■□□□□ 0.37
SNX6-206ENST00000556162 ANKRD45Q5TZF3 282 aa17.37■□□□□ 0.37
SNX6-206ENST00000556162 SMC5Q8IY18 1101 aa17.37■□□□□ 0.37
SNX6-206ENST00000556162 DBNLQ9UJU6 430 aaKnown RBP17.37■□□□□ 0.37
SNX6-206ENST00000556162 VIL1P09327 827 aaKnown RBP17.36■□□□□ 0.37
SNX6-206ENST00000556162 ERICH6BQ5W0A0 696 aa17.35■□□□□ 0.37
SNX6-206ENST00000556162 ZNF526Q8TF50 670 aaPredicted RBP17.35■□□□□ 0.37
SNX6-206ENST00000556162 TLR7Q9NYK1 1049 aaKnown RBP17.35■□□□□ 0.37
SNX6-206ENST00000556162 SEMA3EO15041 775 aa17.35■□□□□ 0.37
SNX6-206ENST00000556162 UQCRFS1P1P0C7P4 283 aa17.35■□□□□ 0.37
SNX6-206ENST00000556162 TTC39AQ5SRH9 613 aa17.35■□□□□ 0.37
SNX6-206ENST00000556162 B4GALNT3Q6L9W6 998 aa17.35■□□□□ 0.37
SNX6-206ENST00000556162 RSBN1LQ6PCB5 846 aaPredicted RBP17.35■□□□□ 0.37
SNX6-206ENST00000556162 DENND2AQ9ULE3 1009 aa17.35■□□□□ 0.37
SNX6-206ENST00000556162 CHAF1AQ13111 956 aaPredicted RBP17.34■□□□□ 0.37
SNX6-206ENST00000556162 DACT2Q5SW24 774 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms