RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 CDC5LQ99459 802 aaKnown RBP4.91□□□□□ -1.62
LINC00648-202ENST00000555985 ZNRF3Q9ULT6 936 aa4.91□□□□□ -1.62
LINC00648-202ENST00000555985 DDNO94850 711 aaPredicted RBP4.91□□□□□ -1.62
LINC00648-202ENST00000555985 VIL1P09327 827 aaKnown RBP4.91□□□□□ -1.62
LINC00648-202ENST00000555985 FGFR2P21802 821 aa4.91□□□□□ -1.62
LINC00648-202ENST00000555985 ATP2B4P23634 1241 aa4.91□□□□□ -1.62
LINC00648-202ENST00000555985 PTPN12Q05209 780 aaKnown RBP4.91□□□□□ -1.62
LINC00648-202ENST00000555985 CXCL9Q07325 125 aa4.91□□□□□ -1.62
LINC00648-202ENST00000555985 B4GALNT3Q6L9W6 998 aa4.91□□□□□ -1.62
LINC00648-202ENST00000555985 LMBR1LQ6UX01 489 aa4.91□□□□□ -1.62
LINC00648-202ENST00000555985 ATG9AQ7Z3C6 839 aa4.91□□□□□ -1.62
LINC00648-202ENST00000555985 GPBP1L1Q9HC44 474 aaPredicted RBP4.91□□□□□ -1.62
LINC00648-202ENST00000555985 ZBTB7BO15156 539 aaPredicted RBP4.9□□□□□ -1.62
LINC00648-202ENST00000555985 TOMM70O94826 608 aa4.9□□□□□ -1.62
LINC00648-202ENST00000555985 IL1R1P14778 569 aa4.9□□□□□ -1.62
LINC00648-202ENST00000555985 KLRK1P26718 216 aa4.9□□□□□ -1.62
LINC00648-202ENST00000555985 CHRNDQ07001 517 aa4.9□□□□□ -1.62
LINC00648-202ENST00000555985 FSTL1Q12841 308 aa4.9□□□□□ -1.62
LINC00648-202ENST00000555985 GLIPR1L2Q4G1C9 344 aa4.9□□□□□ -1.62
LINC00648-202ENST00000555985 TXNRD3Q86VQ6 643 aa4.9□□□□□ -1.62
LINC00648-202ENST00000555985 MEIS3Q99687 375 aa4.9□□□□□ -1.62
LINC00648-202ENST00000555985 TAF1DQ9H5J8 278 aaPredicted RBP4.9□□□□□ -1.62
LINC00648-202ENST00000555985 RRAGCQ9HB90 399 aa4.9□□□□□ -1.62
LINC00648-202ENST00000555985 KCNQ5Q9NR82 932 aa4.9□□□□□ -1.62
LINC00648-202ENST00000555985 BRPF3Q9ULD4 1205 aa4.9□□□□□ -1.62
LINC00648-202ENST00000555985 LEMD3Q9Y2U8 911 aa4.9□□□□□ -1.62
LINC00648-202ENST00000555985 COL1A1P02452 1464 aaPredicted RBP4.9□□□□□ -1.62
LINC00648-202ENST00000555985 MAST2Q6P0Q8 1798 aa4.9□□□□□ -1.62
LINC00648-202ENST00000555985 DOCK2Q92608 1830 aa4.9□□□□□ -1.62
LINC00648-202ENST00000555985 ANKRD18BA2A2Z9 1011 aa4.9□□□□□ -1.62
LINC00648-202ENST00000555985 ZNF280AP59817 542 aaPredicted RBP4.9□□□□□ -1.62
LINC00648-202ENST00000555985 DPF2Q92785 391 aa4.9□□□□□ -1.62
LINC00648-202ENST00000555985 ZBED3Q96IU2 234 aaPredicted RBP4.9□□□□□ -1.62
LINC00648-202ENST00000555985 GGA1Q9UJY5 639 aa4.9□□□□□ -1.62
LINC00648-202ENST00000555985 AKAP11Q9UKA4 1901 aa4.9□□□□□ -1.63
LINC00648-202ENST00000555985 PPIP5K2O43314 1243 aa4.9□□□□□ -1.63
LINC00648-202ENST00000555985 ECE2O60344 883 aa4.9□□□□□ -1.63
LINC00648-202ENST00000555985 CIAO1O76071 339 aa4.9□□□□□ -1.63
LINC00648-202ENST00000555985 ITGBL1O95965 494 aaPredicted RBP4.9□□□□□ -1.63
LINC00648-202ENST00000555985 PRKAR2AP13861 404 aaKnown RBP4.9□□□□□ -1.63
LINC00648-202ENST00000555985 VEGFAP15692 232 aaPredicted RBP4.9□□□□□ -1.63
LINC00648-202ENST00000555985 FKBP1AP62942 108 aaKnown RBP4.9□□□□□ -1.63
LINC00648-202ENST00000555985 WASHC4Q2M389 1173 aa4.9□□□□□ -1.63
LINC00648-202ENST00000555985 SLC4A10Q6U841 1118 aa4.9□□□□□ -1.63
LINC00648-202ENST00000555985 TMEM57Q8N5G2 664 aa4.9□□□□□ -1.63
LINC00648-202ENST00000555985 ZNF594Q96JF6 807 aaPredicted RBP4.9□□□□□ -1.63
LINC00648-202ENST00000555985 GPR101Q96P66 508 aaPredicted RBP4.9□□□□□ -1.63
LINC00648-202ENST00000555985 PUS3Q9BZE2 481 aaKnown RBP4.9□□□□□ -1.63
LINC00648-202ENST00000555985 ANKRD2Q9GZV1 360 aa4.9□□□□□ -1.63
LINC00648-202ENST00000555985 ZMYND15Q9H091 742 aa4.9□□□□□ -1.63
LINC00648-202ENST00000555985 COPRSQ9NQ92 184 aa4.9□□□□□ -1.63
LINC00648-202ENST00000555985 GPRC5DQ9NZD1 345 aa4.9□□□□□ -1.63
LINC00648-202ENST00000555985 POTEIP0CG38 1075 aa4.89□□□□□ -1.63
LINC00648-202ENST00000555985 POTEJP0CG39 1038 aa4.89□□□□□ -1.63
LINC00648-202ENST00000555985 RPS12P25398 132 aaKnown RBP4.89□□□□□ -1.63
LINC00648-202ENST00000555985 IFIT5Q13325 482 aaKnown RBP4.89□□□□□ -1.63
LINC00648-202ENST00000555985 DACT2Q5SW24 774 aa4.89□□□□□ -1.63
LINC00648-202ENST00000555985 NIM1KQ8IY84 436 aa4.89□□□□□ -1.63
LINC00648-202ENST00000555985 LARGE2Q8N3Y3 721 aa4.89□□□□□ -1.63
LINC00648-202ENST00000555985 DNAJC5GQ8N7S2 189 aa4.89□□□□□ -1.63
LINC00648-202ENST00000555985 CCDC85AQ96PX6 553 aaPredicted RBP4.89□□□□□ -1.63
LINC00648-202ENST00000555985 EYA3Q99504 573 aa4.89□□□□□ -1.63
LINC00648-202ENST00000555985 C9orf78Q9NZ63 289 aaPredicted RBP4.89□□□□□ -1.63
LINC00648-202ENST00000555985 NSFL1CQ9UNZ2 370 aaKnown RBP4.89□□□□□ -1.63
LINC00648-202ENST00000555985 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.89□□□□□ -1.63
LINC00648-202ENST00000555985 ZNF804BA4D1E1 1349 aa4.89□□□□□ -1.63
LINC00648-202ENST00000555985 MROH5Q6ZUA9 1318 aa4.89□□□□□ -1.63
LINC00648-202ENST00000555985 FOCADQ5VW36 1801 aa4.89□□□□□ -1.63
LINC00648-202ENST00000555985 CEP350Q5VT06 3117 aa4.89□□□□□ -1.63
LINC00648-202ENST00000555985 PSMD14O00487 310 aa4.89□□□□□ -1.63
LINC00648-202ENST00000555985 IPO8O15397 1037 aaKnown RBP4.89□□□□□ -1.63
LINC00648-202ENST00000555985 UFL1O94874 794 aa4.89□□□□□ -1.63
LINC00648-202ENST00000555985 IGHMBP2P38935 993 aaKnown RBP4.89□□□□□ -1.63
LINC00648-202ENST00000555985 HIRAP54198 1017 aaPredicted RBP4.89□□□□□ -1.63
LINC00648-202ENST00000555985 LRRC24Q50LG9 513 aa4.89□□□□□ -1.63
LINC00648-202ENST00000555985 ZKSCAN2Q63HK3 967 aa4.89□□□□□ -1.63
LINC00648-202ENST00000555985 DPY19L2Q6NUT2 758 aa4.89□□□□□ -1.63
LINC00648-202ENST00000555985 PODNQ7Z5L7 613 aa4.89□□□□□ -1.63
LINC00648-202ENST00000555985 FBXO33Q7Z6M2 555 aa4.89□□□□□ -1.63
LINC00648-202ENST00000555985 LRRFIP2Q9Y608 721 aaKnown RBP4.89□□□□□ -1.63
LINC00648-202ENST00000555985 FAM205AQ6ZU69 1335 aa4.89□□□□□ -1.63
LINC00648-202ENST00000555985 SHTN1A0MZ66 631 aa4.88□□□□□ -1.63
LINC00648-202ENST00000555985 MMP14P50281 582 aa4.88□□□□□ -1.63
LINC00648-202ENST00000555985 UBE4AQ14139 1066 aa4.88□□□□□ -1.63
LINC00648-202ENST00000555985 CIAPIN1Q6FI81 312 aa4.88□□□□□ -1.63
LINC00648-202ENST00000555985 USP50Q70EL3 339 aaPredicted RBP4.88□□□□□ -1.63
LINC00648-202ENST00000555985 LDHDQ86WU2 507 aa4.88□□□□□ -1.63
LINC00648-202ENST00000555985 TDRD7Q8NHU6 1098 aaKnown RBP4.88□□□□□ -1.63
LINC00648-202ENST00000555985 JDP2Q8WYK2 163 aa4.88□□□□□ -1.63
LINC00648-202ENST00000555985 COA1Q9GZY4 146 aa4.88□□□□□ -1.63
LINC00648-202ENST00000555985 HACL1Q9UJ83 578 aa4.88□□□□□ -1.63
LINC00648-202ENST00000555985 CDK5RAP2Q96SN8 1893 aa4.88□□□□□ -1.63
LINC00648-202ENST00000555985 IQCA1LA6NCM1 817 aa4.88□□□□□ -1.63
LINC00648-202ENST00000555985 GNAI3P08754 354 aa4.88□□□□□ -1.63
LINC00648-202ENST00000555985 EPHX2P34913 555 aa4.88□□□□□ -1.63
LINC00648-202ENST00000555985 EPS15P42566 896 aa4.88□□□□□ -1.63
LINC00648-202ENST00000555985 GMPSP49915 693 aaPredicted RBP4.88□□□□□ -1.63
LINC00648-202ENST00000555985 EIF6P56537 245 aaKnown RBP4.88□□□□□ -1.63
LINC00648-202ENST00000555985 TNIP1Q15025 636 aa4.88□□□□□ -1.63
LINC00648-202ENST00000555985 RSBN1LQ6PCB5 846 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms