RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 ANTXR1Q9H6X2 564 aa19.51■□□□□ 0.71
PCNX1-209ENST00000554879 PXDNLA1KZ92 1463 aa19.51■□□□□ 0.71
PCNX1-209ENST00000554879 ZNF213O14771 459 aa19.51■□□□□ 0.71
PCNX1-209ENST00000554879 NAPBQ9H115 298 aa19.51■□□□□ 0.71
PCNX1-209ENST00000554879 CCT2P78371 535 aaKnown RBP19.5■□□□□ 0.71
PCNX1-209ENST00000554879 CPLX2Q6PUV4 134 aaKnown RBP19.5■□□□□ 0.71
PCNX1-209ENST00000554879 NYXQ9GZU5 481 aa19.5■□□□□ 0.71
PCNX1-209ENST00000554879 RASEFQ8IZ41 740 aa19.5■□□□□ 0.71
PCNX1-209ENST00000554879 ERICH2A1L162 156 aa19.5■□□□□ 0.71
PCNX1-209ENST00000554879 SF3B2Q13435 895 aaKnown RBP19.5■□□□□ 0.71
PCNX1-209ENST00000554879 TTF1Q15361 905 aaPredicted RBP19.5■□□□□ 0.71
PCNX1-209ENST00000554879 PUM3Q15397 648 aaKnown RBP19.5■□□□□ 0.71
PCNX1-209ENST00000554879 ZRSR1Q15695 479 aaKnown RBP19.5■□□□□ 0.71
PCNX1-209ENST00000554879 SLC4A8Q2Y0W8 1093 aa19.5■□□□□ 0.71
PCNX1-209ENST00000554879 ZSCAN31Q96LW9 406 aaPredicted RBP19.5■□□□□ 0.71
PCNX1-209ENST00000554879 PPP1R1BQ9UD71 204 aaPredicted RBP19.5■□□□□ 0.71
PCNX1-209ENST00000554879 ERVV-1B6SEH8 477 aa19.5■□□□□ 0.71
PCNX1-209ENST00000554879 HSPA4P34932 840 aa19.5■□□□□ 0.71
PCNX1-209ENST00000554879 BRF1Q92994 677 aa19.5■□□□□ 0.71
PCNX1-209ENST00000554879 C6orf229H3BNL8 230 aa19.49■□□□□ 0.71
PCNX1-209ENST00000554879 IRX3P78415 501 aaPredicted RBP19.49■□□□□ 0.71
PCNX1-209ENST00000554879 ZBTB22O15209 634 aa19.49■□□□□ 0.71
PCNX1-209ENST00000554879 CEBPZQ03701 1054 aaKnown RBP19.49■□□□□ 0.71
PCNX1-209ENST00000554879 MIGA1Q8NAN2 632 aa19.49■□□□□ 0.71
PCNX1-209ENST00000554879 GDPD2Q9HCC8 539 aa19.49■□□□□ 0.71
PCNX1-209ENST00000554879 DHX37Q8IY37 1157 aaKnown RBP19.49■□□□□ 0.71
PCNX1-209ENST00000554879 CNBD1Q8NA66 436 aa19.49■□□□□ 0.71
PCNX1-209ENST00000554879 ERFEQ4G0M1 354 aa19.48■□□□□ 0.71
PCNX1-209ENST00000554879 SLC4A9Q96Q91 983 aa19.48■□□□□ 0.71
PCNX1-209ENST00000554879 HAUS7Q99871 368 aa19.48■□□□□ 0.71
PCNX1-209ENST00000554879 WDR33Q9C0J8 1336 aaKnown RBP19.48■□□□□ 0.71
PCNX1-209ENST00000554879 SLC27A2O14975 620 aa19.48■□□□□ 0.71
PCNX1-209ENST00000554879 ZNF589Q86UQ0 364 aaPredicted RBP19.48■□□□□ 0.71
PCNX1-209ENST00000554879 NSFL1CQ9UNZ2 370 aaKnown RBP19.48■□□□□ 0.71
PCNX1-209ENST00000554879 SF3A1Q15459 793 aaKnown RBP19.48■□□□□ 0.71
PCNX1-209ENST00000554879 MAGEB6Q8N7X4 407 aa19.48■□□□□ 0.71
PCNX1-209ENST00000554879 RABL6Q3YEC7 729 aaPredicted RBP19.47■□□□□ 0.71
PCNX1-209ENST00000554879 PHKA1P46020 1223 aa19.47■□□□□ 0.71
PCNX1-209ENST00000554879 SYAP1Q96A49 352 aaPredicted RBP19.47■□□□□ 0.71
PCNX1-209ENST00000554879 CCDC94Q9BW85 323 aaPredicted RBP19.47■□□□□ 0.71
PCNX1-209ENST00000554879 DYNC1I1O14576 645 aa19.47■□□□□ 0.71
PCNX1-209ENST00000554879 APBA3O96018 575 aa19.47■□□□□ 0.71
PCNX1-209ENST00000554879 ZFYP08048 801 aaPredicted RBP19.47■□□□□ 0.71
PCNX1-209ENST00000554879 LPIN2Q92539 896 aa19.47■□□□□ 0.71
PCNX1-209ENST00000554879 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.47■□□□□ 0.71
PCNX1-209ENST00000554879 CHGBP05060 677 aa19.46■□□□□ 0.71
PCNX1-209ENST00000554879 HMG20BQ9P0W2 317 aa19.46■□□□□ 0.71
PCNX1-209ENST00000554879 PDE8BO95263 885 aa19.46■□□□□ 0.71
PCNX1-209ENST00000554879 EIF5P55010 431 aaKnown RBP19.46■□□□□ 0.71
PCNX1-209ENST00000554879 BARGINQ6ZT62 677 aa19.46■□□□□ 0.71
PCNX1-209ENST00000554879 PDCL2Q8N4E4 241 aa19.46■□□□□ 0.71
PCNX1-209ENST00000554879 LSG1Q9H089 658 aaKnown RBP19.46■□□□□ 0.71
PCNX1-209ENST00000554879 RGPD1P0DJD0 1748 aa19.46■□□□□ 0.71
PCNX1-209ENST00000554879 CYP7A1P22680 504 aa19.46■□□□□ 0.71
PCNX1-209ENST00000554879 KRT27Q7Z3Y8 459 aa19.45■□□□□ 0.7
PCNX1-209ENST00000554879 GJB2P29033 226 aa19.45■□□□□ 0.7
PCNX1-209ENST00000554879 BCAMP50895 628 aa19.45■□□□□ 0.7
PCNX1-209ENST00000554879 ST5P78524 1137 aa19.45■□□□□ 0.7
PCNX1-209ENST00000554879 SASS6Q6UVJ0 657 aa19.45■□□□□ 0.7
PCNX1-209ENST00000554879 AMOTL1Q8IY63 956 aa19.45■□□□□ 0.7
PCNX1-209ENST00000554879 PDCP20941 246 aa19.45■□□□□ 0.7
PCNX1-209ENST00000554879 ADCK5Q3MIX3 580 aa19.45■□□□□ 0.7
PCNX1-209ENST00000554879 CCDC102BQ68D86 513 aa19.45■□□□□ 0.7
PCNX1-209ENST00000554879 IL25Q9H293 177 aa19.45■□□□□ 0.7
PCNX1-209ENST00000554879 RGPD5Q99666 1765 aa19.45■□□□□ 0.7
PCNX1-209ENST00000554879 UTYO14607 1347 aa19.45■□□□□ 0.7
PCNX1-209ENST00000554879 RAD21O60216 631 aa19.45■□□□□ 0.7
PCNX1-209ENST00000554879 AKAP17AQ02040 695 aaKnown RBP19.45■□□□□ 0.7
PCNX1-209ENST00000554879 Q6ZUG5 572 aa19.45■□□□□ 0.7
PCNX1-209ENST00000554879 DZIP1Q86YF9 867 aaKnown RBP19.45■□□□□ 0.7
PCNX1-209ENST00000554879 WWC3Q9ULE0 1092 aa19.44■□□□□ 0.7
PCNX1-209ENST00000554879 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.44■□□□□ 0.7
PCNX1-209ENST00000554879 GUCY1B3Q02153 619 aa19.44■□□□□ 0.7
PCNX1-209ENST00000554879 ATG9AQ7Z3C6 839 aa19.44■□□□□ 0.7
PCNX1-209ENST00000554879 NUP133Q8WUM0 1156 aa19.44■□□□□ 0.7
PCNX1-209ENST00000554879 SH2B1Q9NRF2 756 aaPredicted RBP19.44■□□□□ 0.7
PCNX1-209ENST00000554879 CCDC66A2RUB6 948 aa19.44■□□□□ 0.7
PCNX1-209ENST00000554879 CIAO1O76071 339 aa19.44■□□□□ 0.7
PCNX1-209ENST00000554879 BAG4O95429 457 aaKnown RBP19.44■□□□□ 0.7
PCNX1-209ENST00000554879 GYG1P46976 350 aa19.44■□□□□ 0.7
PCNX1-209ENST00000554879 TRIM28Q13263 835 aaKnown RBP19.44■□□□□ 0.7
PCNX1-209ENST00000554879 PTF1AQ7RTS3 328 aa19.44■□□□□ 0.7
PCNX1-209ENST00000554879 RFX5P48382 616 aaPredicted RBP19.43■□□□□ 0.7
PCNX1-209ENST00000554879 CCDC82Q8N4S0 544 aa19.43■□□□□ 0.7
PCNX1-209ENST00000554879 ZNF622Q969S3 477 aaKnown RBP eCLIP19.43■□□□□ 0.7
PCNX1-209ENST00000554879 COL15A1P39059 1388 aa19.43■□□□□ 0.7
PCNX1-209ENST00000554879 SART3Q15020 963 aaKnown RBP19.43■□□□□ 0.7
PCNX1-209ENST00000554879 RUFY3Q7L099 469 aa19.43■□□□□ 0.7
PCNX1-209ENST00000554879 LINC00116Q8NCU8 138 aa19.43■□□□□ 0.7
PCNX1-209ENST00000554879 DRC7Q8IY82 874 aa19.43■□□□□ 0.7
PCNX1-209ENST00000554879 CHRNDQ07001 517 aa19.43■□□□□ 0.7
PCNX1-209ENST00000554879 BICD2Q8TD16 824 aa19.43■□□□□ 0.7
PCNX1-209ENST00000554879 MROH5Q6ZUA9 1318 aa19.43■□□□□ 0.7
PCNX1-209ENST00000554879 LETM1O95202 739 aaPredicted RBP19.42■□□□□ 0.7
PCNX1-209ENST00000554879 RPS8P62241 208 aaKnown RBP19.42■□□□□ 0.7
PCNX1-209ENST00000554879 TTLL5Q6EMB2 1281 aa19.42■□□□□ 0.7
PCNX1-209ENST00000554879 CCDC144CPQ8IYA2 1237 aa19.42■□□□□ 0.7
PCNX1-209ENST00000554879 GPAA1O43292 621 aa19.42■□□□□ 0.7
PCNX1-209ENST00000554879 KIF2CQ99661 725 aa19.42■□□□□ 0.7
PCNX1-209ENST00000554879 SPATA31A6Q5VVP1 1343 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms