RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 DGKGP49619 791 aa6.47□□□□□ -1.37
VTI1B-203ENST00000554636 KCNQ4P56696 695 aa6.47□□□□□ -1.37
VTI1B-203ENST00000554636 C11orf91Q3C1V1 193 aa6.47□□□□□ -1.37
VTI1B-203ENST00000554636 IER5Q5VY09 327 aa6.47□□□□□ -1.37
VTI1B-203ENST00000554636 IFT43Q96FT9 208 aa6.47□□□□□ -1.37
VTI1B-203ENST00000554636 UBE2OQ9C0C9 1292 aaKnown RBP6.47□□□□□ -1.37
VTI1B-203ENST00000554636 SAP130Q9H0E3 1048 aa6.47□□□□□ -1.37
VTI1B-203ENST00000554636 DMGDHQ9UI17 866 aaKnown RBP6.47□□□□□ -1.37
VTI1B-203ENST00000554636 STRCQ7RTU9 1775 aa6.46□□□□□ -1.37
VTI1B-203ENST00000554636 GNB5O14775 395 aa6.46□□□□□ -1.38
VTI1B-203ENST00000554636 MICAL2O94851 1124 aa6.46□□□□□ -1.38
VTI1B-203ENST00000554636 EPB42P16452 691 aa6.46□□□□□ -1.38
VTI1B-203ENST00000554636 COL8A1P27658 744 aa6.46□□□□□ -1.38
VTI1B-203ENST00000554636 GRNP28799 593 aaKnown RBP6.46□□□□□ -1.38
VTI1B-203ENST00000554636 DAPK1P53355 1430 aa6.46□□□□□ -1.38
VTI1B-203ENST00000554636 COX20Q5RI15 118 aa6.46□□□□□ -1.38
VTI1B-203ENST00000554636 LINC00114Q6XXX2 140 aa6.46□□□□□ -1.38
VTI1B-203ENST00000554636 C8orf86Q6ZUL3 223 aa6.46□□□□□ -1.38
VTI1B-203ENST00000554636 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.46□□□□□ -1.38
VTI1B-203ENST00000554636 CXXC1Q9P0U4 656 aaPredicted RBP6.46□□□□□ -1.38
VTI1B-203ENST00000554636 SLAIN2Q9P270 581 aa6.46□□□□□ -1.38
VTI1B-203ENST00000554636 INPP5BP32019 993 aa6.45□□□□□ -1.38
VTI1B-203ENST00000554636 ARSDP51689 593 aa6.45□□□□□ -1.38
VTI1B-203ENST00000554636 CCINQ13939 588 aa6.45□□□□□ -1.38
VTI1B-203ENST00000554636 GGT6Q6P531 493 aa6.45□□□□□ -1.38
VTI1B-203ENST00000554636 TREML1Q86YW5 311 aa6.45□□□□□ -1.38
VTI1B-203ENST00000554636 RGL4Q8IZJ4 473 aa6.45□□□□□ -1.38
VTI1B-203ENST00000554636 MYO19Q96H55 970 aa6.45□□□□□ -1.38
VTI1B-203ENST00000554636 ARID3AQ99856 593 aa6.45□□□□□ -1.38
VTI1B-203ENST00000554636 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.45□□□□□ -1.38
VTI1B-203ENST00000554636 PZPP20742 1482 aa6.45□□□□□ -1.38
VTI1B-203ENST00000554636 ZC3H13Q5T200 1668 aaKnown RBP6.45□□□□□ -1.38
VTI1B-203ENST00000554636 ABCC3O15438 1527 aa6.45□□□□□ -1.38
VTI1B-203ENST00000554636 DUOX2Q9NRD8 1548 aa6.45□□□□□ -1.38
VTI1B-203ENST00000554636 CEP170BQ9Y4F5 1589 aaPredicted RBP6.44□□□□□ -1.38
VTI1B-203ENST00000554636 NCOA1Q15788 1441 aa6.44□□□□□ -1.38
VTI1B-203ENST00000554636 M0R082 166 aa6.44□□□□□ -1.38
VTI1B-203ENST00000554636 KIF3BO15066 747 aa6.44□□□□□ -1.38
VTI1B-203ENST00000554636 TSPY4P0CV99 314 aa6.44□□□□□ -1.38
VTI1B-203ENST00000554636 TSPY10P0CW01 314 aa6.44□□□□□ -1.38
VTI1B-203ENST00000554636 ATP2B4P23634 1241 aa6.44□□□□□ -1.38
VTI1B-203ENST00000554636 PLA2G4EQ3MJ16 856 aa6.44□□□□□ -1.38
VTI1B-203ENST00000554636 C16orf46Q6P387 395 aa6.44□□□□□ -1.38
VTI1B-203ENST00000554636 ZNF417Q8TAU3 575 aa6.44□□□□□ -1.38
VTI1B-203ENST00000554636 CLP1Q92989 425 aaKnown RBP6.44□□□□□ -1.38
VTI1B-203ENST00000554636 TNFRSF25Q93038 417 aa6.44□□□□□ -1.38
VTI1B-203ENST00000554636 ZNF587Q96SQ5 575 aaPredicted RBP6.44□□□□□ -1.38
VTI1B-203ENST00000554636 GSX2Q9BZM3 304 aa6.44□□□□□ -1.38
VTI1B-203ENST00000554636 PRDM15P57071 1507 aaPredicted RBP6.44□□□□□ -1.38
VTI1B-203ENST00000554636 KIF15Q9NS87 1388 aa6.44□□□□□ -1.38
VTI1B-203ENST00000554636 DEPDC5O75140 1603 aa6.43□□□□□ -1.38
VTI1B-203ENST00000554636 ERBINQ96RT1 1412 aa6.43□□□□□ -1.38
VTI1B-203ENST00000554636 ADGRL2O95490 1459 aa6.43□□□□□ -1.38
VTI1B-203ENST00000554636 CEP152O94986 1710 aa6.43□□□□□ -1.38
VTI1B-203ENST00000554636 CARNS1A5YM72 827 aa6.43□□□□□ -1.38
VTI1B-203ENST00000554636 ADARB2-AS1A8MUL3 147 aa6.43□□□□□ -1.38
VTI1B-203ENST00000554636 SASH3O75995 380 aa6.43□□□□□ -1.38
VTI1B-203ENST00000554636 ALBP02768 609 aa6.43□□□□□ -1.38
VTI1B-203ENST00000554636 TARSP26639 723 aaKnown RBP6.43□□□□□ -1.38
VTI1B-203ENST00000554636 SCNN1AP37088 669 aa6.43□□□□□ -1.38
VTI1B-203ENST00000554636 MLLT1Q03111 559 aaPredicted RBP6.43□□□□□ -1.38
VTI1B-203ENST00000554636 ETFBKMTQ8IXQ9 262 aa6.43□□□□□ -1.38
VTI1B-203ENST00000554636 CMTR1Q8N1G2 835 aaKnown RBP6.43□□□□□ -1.38
VTI1B-203ENST00000554636 TRIM11Q96F44 468 aa6.43□□□□□ -1.38
VTI1B-203ENST00000554636 MDFIQ99750 246 aa6.43□□□□□ -1.38
VTI1B-203ENST00000554636 SLC6A14Q9UN76 642 aa6.43□□□□□ -1.38
VTI1B-203ENST00000554636 CAMSAP1Q5T5Y3 1602 aa6.43□□□□□ -1.38
VTI1B-203ENST00000554636 PLA2R1Q13018 1463 aa6.42□□□□□ -1.38
VTI1B-203ENST00000554636 KRBA1A5PL33 1030 aa6.42□□□□□ -1.38
VTI1B-203ENST00000554636 PIK3R2O00459 728 aa6.42□□□□□ -1.38
VTI1B-203ENST00000554636 RARAP10276 462 aa6.42□□□□□ -1.38
VTI1B-203ENST00000554636 FAM26DQ5JW98 314 aa6.42□□□□□ -1.38
VTI1B-203ENST00000554636 NUDT8Q8WV74 236 aa6.42□□□□□ -1.38
VTI1B-203ENST00000554636 PLVAPQ9BX97 442 aa6.42□□□□□ -1.38
VTI1B-203ENST00000554636 DNAJB12Q9NXW2 375 aaKnown RBP6.42□□□□□ -1.38
VTI1B-203ENST00000554636 SEPT3Q9UH03 358 aa6.42□□□□□ -1.38
VTI1B-203ENST00000554636 RTCBQ9Y3I0 505 aaKnown RBP6.42□□□□□ -1.38
VTI1B-203ENST00000554636 STARD13Q9Y3M8 1113 aa6.42□□□□□ -1.38
VTI1B-203ENST00000554636 SPATA31D1Q6ZQQ2 1576 aa6.42□□□□□ -1.38
VTI1B-203ENST00000554636 PTPRTO14522 1441 aa6.42□□□□□ -1.38
VTI1B-203ENST00000554636 A2ML1A8K2U0 1454 aa6.41□□□□□ -1.38
VTI1B-203ENST00000554636 VWDEQ8N2E2 1590 aa6.41□□□□□ -1.38
VTI1B-203ENST00000554636 FAM229AH3BQW9 127 aa6.41□□□□□ -1.38
VTI1B-203ENST00000554636 OPLAHO14841 1288 aa6.41□□□□□ -1.38
VTI1B-203ENST00000554636 NOP53Q9NZM5 478 aaKnown RBP6.41□□□□□ -1.38
VTI1B-203ENST00000554636 ZFATQ9P243 1243 aa6.41□□□□□ -1.38
VTI1B-203ENST00000554636 NAGPAQ9UK23 515 aa6.41□□□□□ -1.38
VTI1B-203ENST00000554636 TNRQ92752 1358 aa6.41□□□□□ -1.38
VTI1B-203ENST00000554636 ERVK-7P63135 1459 aa6.41□□□□□ -1.38
VTI1B-203ENST00000554636 TNFRSF10BO14763 440 aa6.4□□□□□ -1.38
VTI1B-203ENST00000554636 PTCD1O75127 700 aaKnown RBP6.4□□□□□ -1.38
VTI1B-203ENST00000554636 XYLBO75191 536 aa6.4□□□□□ -1.38
VTI1B-203ENST00000554636 ITGB2P05107 769 aa6.4□□□□□ -1.38
VTI1B-203ENST00000554636 CPB1P15086 417 aa6.4□□□□□ -1.38
VTI1B-203ENST00000554636 BRD2P25440 801 aaKnown RBP6.4□□□□□ -1.38
VTI1B-203ENST00000554636 MICALL1Q8N3F8 863 aa6.4□□□□□ -1.38
VTI1B-203ENST00000554636 JPH1Q9HDC5 661 aaPredicted RBP6.4□□□□□ -1.38
VTI1B-203ENST00000554636 WASHC2CQ9Y4E1 1318 aa6.4□□□□□ -1.39
VTI1B-203ENST00000554636 ANKRD30AQ9BXX3 1397 aa6.4□□□□□ -1.39
VTI1B-203ENST00000554636 NLRP1Q9C000 1473 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms