RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 SCARF1Q14162 830 aa17.44■□□□□ 0.38
PPP4R3A-201ENST00000554308 USP48Q86UV5 1035 aa17.44■□□□□ 0.38
PPP4R3A-201ENST00000554308 AFF2P51816 1311 aa17.43■□□□□ 0.38
PPP4R3A-201ENST00000554308 SLC27A2O14975 620 aa17.43■□□□□ 0.38
PPP4R3A-201ENST00000554308 MCMDC2Q4G0Z9 681 aa17.43■□□□□ 0.38
PPP4R3A-201ENST00000554308 SNAP23O00161 211 aa17.43■□□□□ 0.38
PPP4R3A-201ENST00000554308 MED23Q9ULK4 1368 aa17.42■□□□□ 0.38
PPP4R3A-201ENST00000554308 MCM5P33992 734 aa17.42■□□□□ 0.38
PPP4R3A-201ENST00000554308 TCEANC2Q96MN5 208 aa17.42■□□□□ 0.38
PPP4R3A-201ENST00000554308 CSPP1Q1MSJ5 1256 aa17.42■□□□□ 0.38
PPP4R3A-201ENST00000554308 PARP10Q53GL7 1025 aa17.42■□□□□ 0.38
PPP4R3A-201ENST00000554308 TTC14Q96N46 770 aa17.42■□□□□ 0.38
PPP4R3A-201ENST00000554308 MPHOSPH8Q99549 860 aa17.42■□□□□ 0.38
PPP4R3A-201ENST00000554308 ZNF652Q9Y2D9 606 aa17.42■□□□□ 0.38
PPP4R3A-201ENST00000554308 CYP46A1Q9Y6A2 500 aa17.42■□□□□ 0.38
PPP4R3A-201ENST00000554308 PDE8BO95263 885 aa17.41■□□□□ 0.38
PPP4R3A-201ENST00000554308 RNF20Q5VTR2 975 aa17.41■□□□□ 0.38
PPP4R3A-201ENST00000554308 RUFY3Q7L099 469 aa17.41■□□□□ 0.38
PPP4R3A-201ENST00000554308 C17orf53Q8N3J3 647 aaPredicted RBP17.41■□□□□ 0.38
PPP4R3A-201ENST00000554308 PDRG1Q9NUG6 133 aa17.41■□□□□ 0.38
PPP4R3A-201ENST00000554308 TSC1Q92574 1164 aa17.41■□□□□ 0.38
PPP4R3A-201ENST00000554308 INTS4Q96HW7 963 aaKnown RBP17.41■□□□□ 0.38
PPP4R3A-201ENST00000554308 CCNL1Q9UK58 526 aaPredicted RBP17.41■□□□□ 0.38
PPP4R3A-201ENST00000554308 GOLGB1Q14789 3259 aaKnown RBP17.4■□□□□ 0.38
PPP4R3A-201ENST00000554308 NTSR2O95665 410 aa17.4■□□□□ 0.38
PPP4R3A-201ENST00000554308 ZAP70P43403 619 aa17.4■□□□□ 0.38
PPP4R3A-201ENST00000554308 VPS53Q5VIR6 699 aa17.4■□□□□ 0.38
PPP4R3A-201ENST00000554308 SASS6Q6UVJ0 657 aa17.4■□□□□ 0.38
PPP4R3A-201ENST00000554308 ZSWIM6Q9HCJ5 1215 aa17.4■□□□□ 0.38
PPP4R3A-201ENST00000554308 GNPATO15228 680 aa17.4■□□□□ 0.38
PPP4R3A-201ENST00000554308 USP25Q9UHP3 1055 aa17.4■□□□□ 0.38
PPP4R3A-201ENST00000554308 LIMCH1Q9UPQ0 1083 aa17.4■□□□□ 0.38
PPP4R3A-201ENST00000554308 GTF2E1P29083 439 aaPredicted RBP17.39■□□□□ 0.37
PPP4R3A-201ENST00000554308 CNPY2Q9Y2B0 182 aa17.39■□□□□ 0.37
PPP4R3A-201ENST00000554308 USPL1Q5W0Q7 1092 aa17.39■□□□□ 0.37
PPP4R3A-201ENST00000554308 SEPT12Q8IYM1 358 aa17.39■□□□□ 0.37
PPP4R3A-201ENST00000554308 VGLL2Q8N8G2 317 aa17.39■□□□□ 0.37
PPP4R3A-201ENST00000554308 KCNB2Q92953 911 aa17.39■□□□□ 0.37
PPP4R3A-201ENST00000554308 SRP68Q9UHB9 627 aaKnown RBP17.39■□□□□ 0.37
PPP4R3A-201ENST00000554308 RIC1Q4ADV7 1423 aa17.39■□□□□ 0.37
PPP4R3A-201ENST00000554308 TCHHQ07283 1943 aa17.38■□□□□ 0.37
PPP4R3A-201ENST00000554308 RPAP1Q9BWH6 1393 aaPredicted RBP17.38■□□□□ 0.37
PPP4R3A-201ENST00000554308 KIAA2012Q0VF49 1180 aa17.38■□□□□ 0.37
PPP4R3A-201ENST00000554308 WASHC4Q2M389 1173 aa17.38■□□□□ 0.37
PPP4R3A-201ENST00000554308 CCDC152Q4G0S7 254 aa17.38■□□□□ 0.37
PPP4R3A-201ENST00000554308 DYNC1I1O14576 645 aa17.38■□□□□ 0.37
PPP4R3A-201ENST00000554308 RNF113AO15541 343 aaKnown RBP17.38■□□□□ 0.37
PPP4R3A-201ENST00000554308 MCAMP43121 646 aa17.38■□□□□ 0.37
PPP4R3A-201ENST00000554308 ERFEQ4G0M1 354 aa17.38■□□□□ 0.37
PPP4R3A-201ENST00000554308 CLEC4GQ6UXB4 293 aa17.38■□□□□ 0.37
PPP4R3A-201ENST00000554308 AMIGO3Q86WK7 504 aa17.38■□□□□ 0.37
PPP4R3A-201ENST00000554308 AK7Q96M32 723 aa17.38■□□□□ 0.37
PPP4R3A-201ENST00000554308 LARGE1O95461 756 aa17.37■□□□□ 0.37
PPP4R3A-201ENST00000554308 TBC1D9BQ66K14 1250 aa17.37■□□□□ 0.37
PPP4R3A-201ENST00000554308 CCDC24Q8N4L8 307 aa17.37■□□□□ 0.37
PPP4R3A-201ENST00000554308 SYAP1Q96A49 352 aaPredicted RBP17.37■□□□□ 0.37
PPP4R3A-201ENST00000554308 TM6SF1Q9BZW5 370 aa17.37■□□□□ 0.37
PPP4R3A-201ENST00000554308 TTC12Q9H892 705 aaPredicted RBP17.37■□□□□ 0.37
PPP4R3A-201ENST00000554308 PSMA5P28066 241 aa17.37■□□□□ 0.37
PPP4R3A-201ENST00000554308 PHKA1P46020 1223 aa17.37■□□□□ 0.37
PPP4R3A-201ENST00000554308 BLOC1S2Q6QNY1 142 aa17.37■□□□□ 0.37
PPP4R3A-201ENST00000554308 ANKRD36CQ5JPF3 1778 aa17.36■□□□□ 0.37
PPP4R3A-201ENST00000554308 PHF14O94880 888 aa17.36■□□□□ 0.37
PPP4R3A-201ENST00000554308 CYP21A2P08686 494 aa17.36■□□□□ 0.37
PPP4R3A-201ENST00000554308 ZMYM1Q5SVZ6 1142 aa17.36■□□□□ 0.37
PPP4R3A-201ENST00000554308 OSBP2Q969R2 916 aa17.36■□□□□ 0.37
PPP4R3A-201ENST00000554308 QTRT2Q9H974 415 aaKnown RBP17.36■□□□□ 0.37
PPP4R3A-201ENST00000554308 HELLSQ9NRZ9 838 aa17.36■□□□□ 0.37
PPP4R3A-201ENST00000554308 WDR33Q9C0J8 1336 aaKnown RBP17.36■□□□□ 0.37
PPP4R3A-201ENST00000554308 ZPR1O75312 459 aa17.36■□□□□ 0.37
PPP4R3A-201ENST00000554308 PUM3Q15397 648 aaKnown RBP17.36■□□□□ 0.37
PPP4R3A-201ENST00000554308 CCDC102BQ68D86 513 aa17.36■□□□□ 0.37
PPP4R3A-201ENST00000554308 C3orf67Q6ZVT6 689 aa17.36■□□□□ 0.37
PPP4R3A-201ENST00000554308 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.36■□□□□ 0.37
PPP4R3A-201ENST00000554308 TRPC5Q9UL62 973 aaPredicted RBP17.36■□□□□ 0.37
PPP4R3A-201ENST00000554308 MAST3O60307 1309 aa17.35■□□□□ 0.37
PPP4R3A-201ENST00000554308 MROH5Q6ZUA9 1318 aa17.35■□□□□ 0.37
PPP4R3A-201ENST00000554308 IGHMBP2P38935 993 aaKnown RBP17.35■□□□□ 0.37
PPP4R3A-201ENST00000554308 DNTTIP2Q5QJE6 756 aaKnown RBP17.35■□□□□ 0.37
PPP4R3A-201ENST00000554308 CNTNAP4Q9C0A0 1308 aa17.35■□□□□ 0.37
PPP4R3A-201ENST00000554308 M0R2C6 588 aa17.35■□□□□ 0.37
PPP4R3A-201ENST00000554308 CCDC83Q8IWF9 413 aa17.35■□□□□ 0.37
PPP4R3A-201ENST00000554308 NECAB1Q8N987 351 aa17.35■□□□□ 0.37
PPP4R3A-201ENST00000554308 LPIN2Q92539 896 aa17.35■□□□□ 0.37
PPP4R3A-201ENST00000554308 MAP7D2Q96T17 732 aa17.35■□□□□ 0.37
PPP4R3A-201ENST00000554308 BCL2L12Q9HB09 334 aa17.35■□□□□ 0.37
PPP4R3A-201ENST00000554308 HMG20BQ9P0W2 317 aa17.35■□□□□ 0.37
PPP4R3A-201ENST00000554308 RTCBQ9Y3I0 505 aaKnown RBP17.35■□□□□ 0.37
PPP4R3A-201ENST00000554308 U3KPZ7 1027 aaPredicted RBP17.35■□□□□ 0.37
PPP4R3A-201ENST00000554308 RFX7Q2KHR2 1363 aa17.34■□□□□ 0.37
PPP4R3A-201ENST00000554308 A0A0G2JLW4 131 aa17.34■□□□□ 0.37
PPP4R3A-201ENST00000554308 RPS6KA4O75676 772 aa17.34■□□□□ 0.37
PPP4R3A-201ENST00000554308 ADCY5O95622 1261 aa17.34■□□□□ 0.37
PPP4R3A-201ENST00000554308 HSPD1P10809 573 aaKnown RBP17.34■□□□□ 0.37
PPP4R3A-201ENST00000554308 IDH1O75874 414 aaKnown RBP17.34■□□□□ 0.37
PPP4R3A-201ENST00000554308 HSP90B1P14625 803 aaKnown RBP17.34■□□□□ 0.37
PPP4R3A-201ENST00000554308 SETDB2Q96T68 719 aa17.34■□□□□ 0.37
PPP4R3A-201ENST00000554308 TPCN1Q9ULQ1 816 aa17.34■□□□□ 0.37
PPP4R3A-201ENST00000554308 ME3Q16798 604 aa17.33■□□□□ 0.36
PPP4R3A-201ENST00000554308 ARHGEF1Q92888 912 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms