RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 RPGRQ92834 1020 aaKnown RBP13.19□□□□□ -0.3
PABPN1-203ENST00000553960 C22orf23Q9BZE7 217 aa13.19□□□□□ -0.3
PABPN1-203ENST00000553960 HELLSQ9NRZ9 838 aa13.19□□□□□ -0.3
PABPN1-203ENST00000553960 PAG1Q9NWQ8 432 aa13.19□□□□□ -0.3
PABPN1-203ENST00000553960 MED23Q9ULK4 1368 aa13.19□□□□□ -0.3
PABPN1-203ENST00000553960 FAM177BA6PVY3 158 aa13.18□□□□□ -0.3
PABPN1-203ENST00000553960 TSHZ3Q63HK5 1081 aa13.18□□□□□ -0.3
PABPN1-203ENST00000553960 MASTLQ96GX5 879 aa13.18□□□□□ -0.3
PABPN1-203ENST00000553960 NEUROD6Q96NK8 337 aa13.18□□□□□ -0.3
PABPN1-203ENST00000553960 BOLA2Q9H3K6 86 aa13.18□□□□□ -0.3
PABPN1-203ENST00000553960 ATP6V0A2Q9Y487 856 aa13.18□□□□□ -0.3
PABPN1-203ENST00000553960 UBE3CQ15386 1083 aa13.17□□□□□ -0.3
PABPN1-203ENST00000553960 TSGA10IPQ3SY00 556 aa13.17□□□□□ -0.3
PABPN1-203ENST00000553960 ZMYM1Q5SVZ6 1142 aa13.17□□□□□ -0.3
PABPN1-203ENST00000553960 ZSCAN25Q6NSZ9 544 aa13.17□□□□□ -0.3
PABPN1-203ENST00000553960 DEFB132Q7Z7B7 95 aa13.17□□□□□ -0.3
PABPN1-203ENST00000553960 UPF1Q92900 1129 aaKnown RBP eCLIP13.17□□□□□ -0.3
PABPN1-203ENST00000553960 DDRGK1Q96HY6 314 aa13.17□□□□□ -0.3
PABPN1-203ENST00000553960 CCDC85AQ96PX6 553 aaPredicted RBP13.17□□□□□ -0.3
PABPN1-203ENST00000553960 GNL3LQ9NVN8 582 aaKnown RBP13.17□□□□□ -0.3
PABPN1-203ENST00000553960 COL11A2P13942 1736 aaPredicted RBP13.16□□□□□ -0.3
PABPN1-203ENST00000553960 SALL1Q9NSC2 1324 aa13.16□□□□□ -0.3
PABPN1-203ENST00000553960 SNED1Q8TER0 1413 aa13.16□□□□□ -0.3
PABPN1-203ENST00000553960 ATP2B4P23634 1241 aa13.16□□□□□ -0.3
PABPN1-203ENST00000553960 ADORA1P30542 326 aa13.16□□□□□ -0.3
PABPN1-203ENST00000553960 ANP32AP39687 249 aaKnown RBP13.16□□□□□ -0.3
PABPN1-203ENST00000553960 MCAMP43121 646 aa13.16□□□□□ -0.3
PABPN1-203ENST00000553960 MFAP1P55081 439 aaKnown RBP13.16□□□□□ -0.3
PABPN1-203ENST00000553960 TTC39AQ5SRH9 613 aa13.16□□□□□ -0.3
PABPN1-203ENST00000553960 GORABQ5T7V8 394 aa13.16□□□□□ -0.3
PABPN1-203ENST00000553960 SNX21Q969T3 373 aa13.16□□□□□ -0.3
PABPN1-203ENST00000553960 RILPL2Q969X0 211 aa13.16□□□□□ -0.3
PABPN1-203ENST00000553960 FAM84BQ96KN1 310 aaPredicted RBP13.16□□□□□ -0.3
PABPN1-203ENST00000553960 KIF2CQ99661 725 aa13.16□□□□□ -0.3
PABPN1-203ENST00000553960 DIAPH3Q9NSV4 1193 aa13.16□□□□□ -0.3
PABPN1-203ENST00000553960 KIAA1551Q9HCM1 1747 aa13.16□□□□□ -0.3
PABPN1-203ENST00000553960 NPHP1O15259 732 aa13.15□□□□□ -0.3
PABPN1-203ENST00000553960 PHKA1P46020 1223 aa13.15□□□□□ -0.3
PABPN1-203ENST00000553960 CAVIN4Q5BKX8 364 aa13.15□□□□□ -0.3
PABPN1-203ENST00000553960 MAP4K1Q92918 833 aa13.15□□□□□ -0.3
PABPN1-203ENST00000553960 RTFDC1Q9BY42 306 aaPredicted RBP13.15□□□□□ -0.3
PABPN1-203ENST00000553960 LSG1Q9H089 658 aaKnown RBP13.15□□□□□ -0.3
PABPN1-203ENST00000553960 DENND2AQ9ULE3 1009 aa13.15□□□□□ -0.3
PABPN1-203ENST00000553960 ZMYM6O95789 1325 aa13.14□□□□□ -0.31
PABPN1-203ENST00000553960 RNF113AO15541 343 aaKnown RBP13.14□□□□□ -0.31
PABPN1-203ENST00000553960 HSPA4P34932 840 aa13.14□□□□□ -0.31
PABPN1-203ENST00000553960 SPATA5Q8NB90 893 aa13.14□□□□□ -0.31
PABPN1-203ENST00000553960 C7orf43Q8WVR3 580 aa13.14□□□□□ -0.31
PABPN1-203ENST00000553960 CNKSR1Q969H4 720 aa13.14□□□□□ -0.31
PABPN1-203ENST00000553960 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.14□□□□□ -0.314e-15■■■■□ 19.6
PABPN1-203ENST00000553960 MTFR1LQ9H019 292 aa13.14□□□□□ -0.31
PABPN1-203ENST00000553960 VPS33BQ9H267 617 aa13.14□□□□□ -0.31
PABPN1-203ENST00000553960 HMG20BQ9P0W2 317 aa13.14□□□□□ -0.31
PABPN1-203ENST00000553960 RPAP1Q9BWH6 1393 aaPredicted RBP13.14□□□□□ -0.31
PABPN1-203ENST00000553960 CYP2E1P05181 493 aaPredicted RBP13.13□□□□□ -0.31
PABPN1-203ENST00000553960 IL1R1P14778 569 aa13.13□□□□□ -0.31
PABPN1-203ENST00000553960 TGFB2P61812 414 aa13.13□□□□□ -0.31
PABPN1-203ENST00000553960 RASGRF1Q13972 1273 aa13.13□□□□□ -0.31
PABPN1-203ENST00000553960 SCARF1Q14162 830 aa13.13□□□□□ -0.31
PABPN1-203ENST00000553960 MCMDC2Q4G0Z9 681 aa13.13□□□□□ -0.31
PABPN1-203ENST00000553960 TDRD7Q8NHU6 1098 aaKnown RBP13.13□□□□□ -0.31
PABPN1-203ENST00000553960 IPO9Q96P70 1041 aaKnown RBP13.13□□□□□ -0.31
PABPN1-203ENST00000553960 SGIP1Q9BQI5 828 aa13.13□□□□□ -0.31
PABPN1-203ENST00000553960 FSD1Q9BTV5 496 aa13.13□□□□□ -0.31
PABPN1-203ENST00000553960 DSCC1Q9BVC3 393 aa13.13□□□□□ -0.31
PABPN1-203ENST00000553960 TM6SF1Q9BZW5 370 aa13.13□□□□□ -0.31
PABPN1-203ENST00000553960 H0YIN7 160 aa13.12□□□□□ -0.31
PABPN1-203ENST00000553960 TAF5LO75529 589 aa13.12□□□□□ -0.31
PABPN1-203ENST00000553960 HIBADHP31937 336 aaKnown RBP13.12□□□□□ -0.31
PABPN1-203ENST00000553960 ADD2P35612 726 aa13.12□□□□□ -0.31
PABPN1-203ENST00000553960 ZAP70P43403 619 aa13.12□□□□□ -0.31
PABPN1-203ENST00000553960 NECTIN1Q15223 517 aa13.12□□□□□ -0.31
PABPN1-203ENST00000553960 RABEP1Q15276 862 aa13.12□□□□□ -0.31
PABPN1-203ENST00000553960 HELBQ8NG08 1087 aaPredicted RBP13.12□□□□□ -0.31
PABPN1-203ENST00000553960 APPBP2Q92624 585 aa13.12□□□□□ -0.31
PABPN1-203ENST00000553960 SUGT1Q9Y2Z0 365 aa13.12□□□□□ -0.31
PABPN1-203ENST00000553960 CCDC171Q6TFL3 1326 aa13.12□□□□□ -0.31
PABPN1-203ENST00000553960 MYH13Q9UKX3 1938 aa13.11□□□□□ -0.31
PABPN1-203ENST00000553960 TCRBV5S4A2TA0A5A2 114 aa13.11□□□□□ -0.31
PABPN1-203ENST00000553960 GOLIM4O00461 696 aa13.11□□□□□ -0.31
PABPN1-203ENST00000553960 MCCP23508 829 aa13.11□□□□□ -0.31
PABPN1-203ENST00000553960 NMIQ13287 307 aaPredicted RBP13.11□□□□□ -0.31
PABPN1-203ENST00000553960 ALX1Q15699 326 aa13.11□□□□□ -0.31
PABPN1-203ENST00000553960 KIAA1211Q6ZU35 1233 aa13.11□□□□□ -0.31
PABPN1-203ENST00000553960 CERS3Q8IU89 383 aa13.11□□□□□ -0.31
PABPN1-203ENST00000553960 ZGPATQ8N5A5 531 aaKnown RBP13.11□□□□□ -0.31
PABPN1-203ENST00000553960 FAM205AQ6ZU69 1335 aa13.11□□□□□ -0.31
PABPN1-203ENST00000553960 A0A0D9SFI3 127 aa13.1□□□□□ -0.31
PABPN1-203ENST00000553960 PPEF1O14829 653 aaPredicted RBP13.1□□□□□ -0.31
PABPN1-203ENST00000553960 MSH5O43196 834 aa13.1□□□□□ -0.31
PABPN1-203ENST00000553960 BCAMP50895 628 aa13.1□□□□□ -0.31
PABPN1-203ENST00000553960 MAP3K12Q12852 859 aa13.1□□□□□ -0.31
PABPN1-203ENST00000553960 ZNF804AQ7Z570 1209 aa13.1□□□□□ -0.31
PABPN1-203ENST00000553960 WDR66Q8TBY9 1149 aa13.1□□□□□ -0.31
PABPN1-203ENST00000553960 IL25Q9H293 177 aa13.1□□□□□ -0.31
PABPN1-203ENST00000553960 ALDH8A1Q9H2A2 487 aaPredicted RBP13.1□□□□□ -0.31
PABPN1-203ENST00000553960 GGA1Q9UJY5 639 aa13.1□□□□□ -0.31
PABPN1-203ENST00000553960 BRCA1P38398 1863 aaKnown RBP13.1□□□□□ -0.31
PABPN1-203ENST00000553960 MAST2Q6P0Q8 1798 aa13.09□□□□□ -0.31
PABPN1-203ENST00000553960 NT5C2P49902 561 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms