RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 ANKIB1Q9P2G1 1089 aa14.33□□□□□ -0.12
NEK9-202ENST00000553823 XDHP47989 1333 aa14.33□□□□□ -0.12
NEK9-202ENST00000553823 SLX4Q8IY92 1834 aa14.32□□□□□ -0.12
NEK9-202ENST00000553823 CDC45O75419 566 aa14.32□□□□□ -0.12
NEK9-202ENST00000553823 CNTROBQ8N137 903 aa14.32□□□□□ -0.12
NEK9-202ENST00000553823 CNKSR1Q969H4 720 aa14.32□□□□□ -0.12
NEK9-202ENST00000553823 RILPL2Q969X0 211 aa14.32□□□□□ -0.12
NEK9-202ENST00000553823 ZNF512BQ96KM6 892 aaPredicted RBP14.32□□□□□ -0.12
NEK9-202ENST00000553823 HAUS7Q99871 368 aa14.32□□□□□ -0.12
NEK9-202ENST00000553823 SGIP1Q9BQI5 828 aa14.32□□□□□ -0.12
NEK9-202ENST00000553823 LEMD3Q9Y2U8 911 aa14.32□□□□□ -0.12
NEK9-202ENST00000553823 ATP6V0A2Q9Y487 856 aa14.32□□□□□ -0.12
NEK9-202ENST00000553823 AKAP11Q9UKA4 1901 aa14.32□□□□□ -0.12
NEK9-202ENST00000553823 MAP4K4O95819 1239 aaPredicted RBP14.31□□□□□ -0.12
NEK9-202ENST00000553823 GPSM2P81274 684 aa14.31□□□□□ -0.12
NEK9-202ENST00000553823 CCDC102BQ68D86 513 aa14.31□□□□□ -0.12
NEK9-202ENST00000553823 EVI5LQ96CN4 794 aa14.31□□□□□ -0.12
NEK9-202ENST00000553823 TMX4Q9H1E5 349 aaPredicted RBP14.31□□□□□ -0.12
NEK9-202ENST00000553823 ZNF804BA4D1E1 1349 aa14.31□□□□□ -0.12
NEK9-202ENST00000553823 UQCRFS1P1P0C7P4 283 aa14.3□□□□□ -0.12
NEK9-202ENST00000553823 ATP2B4P23634 1241 aa14.3□□□□□ -0.12
NEK9-202ENST00000553823 PTGER2P43116 358 aa14.3□□□□□ -0.12
NEK9-202ENST00000553823 PHKA1P46020 1223 aa14.3□□□□□ -0.12
NEK9-202ENST00000553823 PRPF40BQ6NWY9 871 aaKnown RBP14.3□□□□□ -0.12
NEK9-202ENST00000553823 SLC51AQ86UW1 340 aa14.3□□□□□ -0.12
NEK9-202ENST00000553823 PODXL2Q9NZ53 605 aa14.3□□□□□ -0.12
NEK9-202ENST00000553823 NSFL1CQ9UNZ2 370 aaKnown RBP14.3□□□□□ -0.12
NEK9-202ENST00000553823 WTIPA6NIX2 430 aaPredicted RBP14.29□□□□□ -0.12
NEK9-202ENST00000553823 DPEP1P16444 411 aa14.29□□□□□ -0.12
NEK9-202ENST00000553823 ARID4AP29374 1257 aaPredicted RBP14.29□□□□□ -0.12
NEK9-202ENST00000553823 BCAMP50895 628 aa14.29□□□□□ -0.12
NEK9-202ENST00000553823 TGFB2P61812 414 aa14.29□□□□□ -0.12
NEK9-202ENST00000553823 CAVIN4Q5BKX8 364 aa14.29□□□□□ -0.12
NEK9-202ENST00000553823 TBC1D9Q6ZT07 1266 aa14.29□□□□□ -0.12
NEK9-202ENST00000553823 DNAJC2Q99543 621 aaKnown RBP14.29□□□□□ -0.12
NEK9-202ENST00000553823 GGA1Q9UJY5 639 aa14.29□□□□□ -0.12
NEK9-202ENST00000553823 LTBP1Q14766 1721 aa14.29□□□□□ -0.12
NEK9-202ENST00000553823 A0A0G2JLW4 131 aa14.28□□□□□ -0.12
NEK9-202ENST00000553823 UFL1O94874 794 aa14.28□□□□□ -0.12
NEK9-202ENST00000553823 GYG1P46976 350 aa14.28□□□□□ -0.12
NEK9-202ENST00000553823 CASC1Q6TDU7 716 aa14.28□□□□□ -0.12
NEK9-202ENST00000553823 C15orf52Q6ZUT6 534 aaKnown RBP14.28□□□□□ -0.12
NEK9-202ENST00000553823 FAM84BQ96KN1 310 aaPredicted RBP14.28□□□□□ -0.12
NEK9-202ENST00000553823 SPON1Q9HCB6 807 aa14.28□□□□□ -0.12
NEK9-202ENST00000553823 KIAA1551Q9HCM1 1747 aa14.28□□□□□ -0.12
NEK9-202ENST00000553823 GNL3LQ9NVN8 582 aaKnown RBP14.28□□□□□ -0.12
NEK9-202ENST00000553823 PAG1Q9NWQ8 432 aa14.28□□□□□ -0.12
NEK9-202ENST00000553823 MYH13Q9UKX3 1938 aa14.28□□□□□ -0.12
NEK9-202ENST00000553823 CD2APQ9Y5K6 639 aa14.28□□□□□ -0.12
NEK9-202ENST00000553823 IRS2Q9Y4H2 1338 aa14.27□□□□□ -0.12
NEK9-202ENST00000553823 KCNA3P22001 575 aa14.27□□□□□ -0.13
NEK9-202ENST00000553823 KLRK1P26718 216 aa14.27□□□□□ -0.13
NEK9-202ENST00000553823 MCAMP43121 646 aa14.27□□□□□ -0.13
NEK9-202ENST00000553823 FKBP4Q02790 459 aaKnown RBP eCLIP14.27□□□□□ -0.13
NEK9-202ENST00000553823 SCARF1Q14162 830 aa14.27□□□□□ -0.13
NEK9-202ENST00000553823 CC2D2BQ6DHV5 1058 aa14.27□□□□□ -0.13
NEK9-202ENST00000553823 FBXO33Q7Z6M2 555 aa14.27□□□□□ -0.13
NEK9-202ENST00000553823 VPS37DQ86XT2 251 aa14.27□□□□□ -0.13
NEK9-202ENST00000553823 MPNDQ8N594 471 aa14.27□□□□□ -0.13
NEK9-202ENST00000553823 TTLL6Q8N841 843 aa14.27□□□□□ -0.13
NEK9-202ENST00000553823 EDC3Q96F86 508 aaKnown RBP14.27□□□□□ -0.13
NEK9-202ENST00000553823 SNRKQ9NRH2 765 aa14.27□□□□□ -0.13
NEK9-202ENST00000553823 NDUFB9Q9Y6M9 179 aa14.27□□□□□ -0.13
NEK9-202ENST00000553823 MYH7P12883 1935 aa14.27□□□□□ -0.13
NEK9-202ENST00000553823 C6orf229H3BNL8 230 aa14.26□□□□□ -0.13
NEK9-202ENST00000553823 GOLIM4O00461 696 aa14.26□□□□□ -0.13
NEK9-202ENST00000553823 CHMLP26374 656 aa14.26□□□□□ -0.13
NEK9-202ENST00000553823 HIBADHP31937 336 aaKnown RBP14.26□□□□□ -0.13
NEK9-202ENST00000553823 ZAP70P43403 619 aa14.26□□□□□ -0.13
NEK9-202ENST00000553823 RASGRF1Q13972 1273 aa14.26□□□□□ -0.13
NEK9-202ENST00000553823 OLFM4Q6UX06 510 aa14.26□□□□□ -0.13
NEK9-202ENST00000553823 DPP8Q6V1X1 898 aaPredicted RBP14.26□□□□□ -0.13
NEK9-202ENST00000553823 TBC1D16Q8TBP0 767 aa14.26□□□□□ -0.13
NEK9-202ENST00000553823 C7orf43Q8WVR3 580 aa14.26□□□□□ -0.13
NEK9-202ENST00000553823 FSD1Q9BTV5 496 aa14.26□□□□□ -0.13
NEK9-202ENST00000553823 PPP1R1BQ9UD71 204 aaPredicted RBP14.26□□□□□ -0.13
NEK9-202ENST00000553823 POLLQ9UGP5 575 aa14.26□□□□□ -0.13
NEK9-202ENST00000553823 BRCA1P38398 1863 aaKnown RBP14.25□□□□□ -0.13
NEK9-202ENST00000553823 MYO5AQ9Y4I1 1855 aaKnown RBP14.25□□□□□ -0.13
NEK9-202ENST00000553823 HIP1O00291 1037 aa14.25□□□□□ -0.13
NEK9-202ENST00000553823 EIF5BO60841 1220 aaKnown RBP14.25□□□□□ -0.13
NEK9-202ENST00000553823 PI16Q6UXB8 463 aa14.25□□□□□ -0.13
NEK9-202ENST00000553823 TXNRD3Q86VQ6 643 aa14.25□□□□□ -0.13
NEK9-202ENST00000553823 TICAM2Q86XR7 235 aa14.25□□□□□ -0.13
NEK9-202ENST00000553823 KLHL34Q8N239 644 aa14.25□□□□□ -0.13
NEK9-202ENST00000553823 KBTBD3Q8NAB2 608 aa14.25□□□□□ -0.13
NEK9-202ENST00000553823 SPATA5Q8NB90 893 aa14.25□□□□□ -0.13
NEK9-202ENST00000553823 TSHZ2Q9NRE2 1034 aa14.25□□□□□ -0.13
NEK9-202ENST00000553823 HMG20BQ9P0W2 317 aa14.25□□□□□ -0.13
NEK9-202ENST00000553823 PIM2Q9P1W9 311 aa14.25□□□□□ -0.13
NEK9-202ENST00000553823 RFX7Q2KHR2 1363 aa14.24□□□□□ -0.13
NEK9-202ENST00000553823 MED23Q9ULK4 1368 aa14.24□□□□□ -0.13
NEK9-202ENST00000553823 SEMA3EO15041 775 aa14.24□□□□□ -0.13
NEK9-202ENST00000553823 ZBTB22O15209 634 aa14.24□□□□□ -0.13
NEK9-202ENST00000553823 SEC24BO95487 1268 aa14.24□□□□□ -0.13
NEK9-202ENST00000553823 MYCNP04198 464 aaPredicted RBP14.24□□□□□ -0.13
NEK9-202ENST00000553823 TTF1Q15361 905 aaPredicted RBP14.24□□□□□ -0.13
NEK9-202ENST00000553823 GRIPAP1Q4V328 841 aa14.24□□□□□ -0.13
NEK9-202ENST00000553823 ZNF804AQ7Z570 1209 aa14.24□□□□□ -0.13
NEK9-202ENST00000553823 GPR101Q96P66 508 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms