RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 NOGQ13253 232 aa12.73□□□□□ -0.37
ACTN1-208ENST00000553370 TRIM28Q13263 835 aaKnown RBP12.73□□□□□ -0.37
ACTN1-208ENST00000553370 HHIPL1Q96JK4 782 aa12.73□□□□□ -0.37
ACTN1-208ENST00000553370 CDC5LQ99459 802 aaKnown RBP12.73□□□□□ -0.37
ACTN1-208ENST00000553370 GBA2Q9HCG7 927 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-208ENST00000553370 SEC31BQ9NQW1 1179 aa12.73□□□□□ -0.37
ACTN1-208ENST00000553370 STK24Q9Y6E0 443 aa12.73□□□□□ -0.37
ACTN1-208ENST00000553370 XDHP47989 1333 aa12.72□□□□□ -0.37
ACTN1-208ENST00000553370 ADM5C9JUS6 153 aa12.72□□□□□ -0.37
ACTN1-208ENST00000553370 PCCAP05165 728 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-208ENST00000553370 JARID2Q92833 1246 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-208ENST00000553370 GGA3Q9NZ52 723 aa12.72□□□□□ -0.37
ACTN1-208ENST00000553370 PGAP2Q9UHJ9 254 aa12.72□□□□□ -0.37
ACTN1-208ENST00000553370 MAP3K2Q9Y2U5 619 aa12.72□□□□□ -0.37
ACTN1-208ENST00000553370 RTL9Q8NET4 1388 aa12.71□□□□□ -0.37
ACTN1-208ENST00000553370 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-208ENST00000553370 ZNF853P0CG23 659 aa12.71□□□□□ -0.37
ACTN1-208ENST00000553370 ZNF157P51786 506 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-208ENST00000553370 ZFP91Q96JP5 570 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-208ENST00000553370 METTL22Q9BUU2 404 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-208ENST00000553370 CTSWP56202 376 aa12.7□□□□□ -0.38
ACTN1-208ENST00000553370 RGMBQ6NW40 437 aa12.7□□□□□ -0.38
ACTN1-208ENST00000553370 C8orf58Q8NAV2 365 aa12.7□□□□□ -0.38
ACTN1-208ENST00000553370 KCNQ5Q9NR82 932 aa12.7□□□□□ -0.38
ACTN1-208ENST00000553370 PODXL2Q9NZ53 605 aa12.7□□□□□ -0.38
ACTN1-208ENST00000553370 PAPPA2Q9BXP8 1791 aa12.7□□□□□ -0.38
ACTN1-208ENST00000553370 ECM29Q5VYK3 1845 aa12.69□□□□□ -0.38
ACTN1-208ENST00000553370 EGFRP00533 1210 aa12.69□□□□□ -0.38
ACTN1-208ENST00000553370 ATP2B4P23634 1241 aa12.69□□□□□ -0.38
ACTN1-208ENST00000553370 RSBN1LQ6PCB5 846 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-208ENST00000553370 TSR2Q969E8 191 aaKnown RBP12.69□□□□□ -0.38
ACTN1-208ENST00000553370 CCDC102AQ96A19 550 aa12.69□□□□□ -0.38
ACTN1-208ENST00000553370 PI4KAP2A4QPH2 592 aa12.68□□□□□ -0.38
ACTN1-208ENST00000553370 USP17L3A6NCW0 530 aa12.68□□□□□ -0.38
ACTN1-208ENST00000553370 USP17L4A6NCW7 530 aa12.68□□□□□ -0.38
ACTN1-208ENST00000553370 VIL1P09327 827 aaKnown RBP12.68□□□□□ -0.38
ACTN1-208ENST00000553370 PYGBP11216 843 aa12.68□□□□□ -0.38
ACTN1-208ENST00000553370 IGHMBP2P38935 993 aaKnown RBP12.68□□□□□ -0.38
ACTN1-208ENST00000553370 KCNJ4P48050 445 aa12.68□□□□□ -0.38
ACTN1-208ENST00000553370 DGKZQ13574 1117 aa12.68□□□□□ -0.38
ACTN1-208ENST00000553370 TTLL12Q14166 644 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-208ENST00000553370 FAM161AQ3B820 660 aa12.68□□□□□ -0.38
ACTN1-208ENST00000553370 ANGEL2Q5VTE6 544 aaKnown RBP12.68□□□□□ -0.38
ACTN1-208ENST00000553370 DLK2Q6UY11 383 aa12.68□□□□□ -0.38
ACTN1-208ENST00000553370 KSR2Q6VAB6 950 aa12.68□□□□□ -0.38
ACTN1-208ENST00000553370 USP17L1Q7RTZ2 530 aa12.68□□□□□ -0.38
ACTN1-208ENST00000553370 PI4KAP1Q8N8J0 262 aa12.68□□□□□ -0.38
ACTN1-208ENST00000553370 AGBL3Q8NEM8 1001 aa12.68□□□□□ -0.38
ACTN1-208ENST00000553370 CDCA5Q96FF9 252 aa12.68□□□□□ -0.38
ACTN1-208ENST00000553370 A0A1B0GUL6 1792 aa12.68□□□□□ -0.38
ACTN1-208ENST00000553370 USP17L8P0C7I0 530 aa12.67□□□□□ -0.38
ACTN1-208ENST00000553370 SCARF1Q14162 830 aa12.67□□□□□ -0.38
ACTN1-208ENST00000553370 TWISTNBQ3B726 338 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-208ENST00000553370 UBE3BQ7Z3V4 1068 aa12.67□□□□□ -0.38
ACTN1-208ENST00000553370 OGFOD1Q8N543 542 aa12.67□□□□□ -0.38
ACTN1-208ENST00000553370 MYOZ2Q9NPC6 264 aa12.67□□□□□ -0.38
ACTN1-208ENST00000553370 FKBP5Q13451 457 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-208ENST00000553370 CHRDL2Q6WN34 429 aa12.66□□□□□ -0.38
ACTN1-208ENST00000553370 TSPYL6Q8N831 410 aa12.66□□□□□ -0.38
ACTN1-208ENST00000553370 MPHOSPH8Q99549 860 aa12.66□□□□□ -0.38
ACTN1-208ENST00000553370 MCOLN1Q9GZU1 580 aa12.66□□□□□ -0.38
ACTN1-208ENST00000553370 MYH16Q9H6N6 1097 aa12.66□□□□□ -0.38
ACTN1-208ENST00000553370 ZNF646O15015 1829 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-208ENST00000553370 MED23Q9ULK4 1368 aa12.66□□□□□ -0.38
ACTN1-208ENST00000553370 ASTN2O75129 1339 aaPredicted RBP12.65□□□□□ -0.38
ACTN1-208ENST00000553370 NF2P35240 595 aa12.65□□□□□ -0.38
ACTN1-208ENST00000553370 KIF23Q02241 960 aaPredicted RBP12.65□□□□□ -0.38
ACTN1-208ENST00000553370 MLLT1Q03111 559 aaPredicted RBP12.65□□□□□ -0.38
ACTN1-208ENST00000553370 CWF19L2Q2TBE0 894 aaKnown RBP12.65□□□□□ -0.38
ACTN1-208ENST00000553370 PODNQ7Z5L7 613 aa12.65□□□□□ -0.38
ACTN1-208ENST00000553370 GREM2Q9H772 168 aa12.65□□□□□ -0.38
ACTN1-208ENST00000553370 CHMP3Q9Y3E7 222 aa12.65□□□□□ -0.38
ACTN1-208ENST00000553370 MYO3BQ8WXR4 1341 aa12.64□□□□□ -0.39
ACTN1-208ENST00000553370 ZNF609O15014 1411 aa12.64□□□□□ -0.39
ACTN1-208ENST00000553370 NEURL1BA8MQ27 555 aa12.64□□□□□ -0.39
ACTN1-208ENST00000553370 TRPA1O75762 1119 aa12.64□□□□□ -0.39
ACTN1-208ENST00000553370 CCT4P50991 539 aaKnown RBP12.64□□□□□ -0.39
ACTN1-208ENST00000553370 ZNF280AP59817 542 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-208ENST00000553370 ZIC5Q96T25 663 aa12.64□□□□□ -0.39
ACTN1-208ENST00000553370 BSDC1Q9NW68 430 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-208ENST00000553370 SAGE1Q9NXZ1 904 aa12.64□□□□□ -0.39
ACTN1-208ENST00000553370 PITPNM2Q9BZ72 1349 aa12.63□□□□□ -0.39
ACTN1-208ENST00000553370 IGKV5-2P06315 115 aa12.63□□□□□ -0.39
ACTN1-208ENST00000553370 SLC10A3P09131 477 aa12.63□□□□□ -0.39
ACTN1-208ENST00000553370 TTLL11Q8NHH1 800 aa12.63□□□□□ -0.39
ACTN1-208ENST00000553370 ANKRD2Q9GZV1 360 aa12.63□□□□□ -0.39
ACTN1-208ENST00000553370 MRS2Q9HD23 443 aa12.63□□□□□ -0.39
ACTN1-208ENST00000553370 HDAC9Q9UKV0 1011 aa12.63□□□□□ -0.39
ACTN1-208ENST00000553370 MINPP1Q9UNW1 487 aa12.63□□□□□ -0.39
ACTN1-208ENST00000553370 SALL2Q9Y467 1007 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-208ENST00000553370 FAM155AB1AL88 458 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-208ENST00000553370 ITGA6P23229 1130 aa12.62□□□□□ -0.39
ACTN1-208ENST00000553370 FKBP1BP68106 108 aa12.62□□□□□ -0.39
ACTN1-208ENST00000553370 FLIIQ13045 1269 aa12.62□□□□□ -0.39
ACTN1-208ENST00000553370 TAF7LQ5H9L4 462 aa12.62□□□□□ -0.39
ACTN1-208ENST00000553370 COA1Q9GZY4 146 aa12.62□□□□□ -0.39
ACTN1-208ENST00000553370 SCAF8Q9UPN6 1271 aaKnown RBP12.62□□□□□ -0.39
ACTN1-208ENST00000553370 MYH13Q9UKX3 1938 aa12.62□□□□□ -0.39
ACTN1-208ENST00000553370 ZNF804BA4D1E1 1349 aa12.62□□□□□ -0.39
ACTN1-208ENST00000553370 SASH1O94885 1247 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms