RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 CCDC102BQ68D86 513 aa16.55■□□□□ 0.24
CALCOCO1-214ENST00000549613 CWC27Q6UX04 472 aaKnown RBP16.55■□□□□ 0.24
CALCOCO1-214ENST00000549613 IPO9Q96P70 1041 aaKnown RBP16.55■□□□□ 0.24
CALCOCO1-214ENST00000549613 TNRC6CQ9HCJ0 1690 aaKnown RBP16.55■□□□□ 0.24
CALCOCO1-214ENST00000549613 SPEF2Q9C093 1822 aa16.54■□□□□ 0.24
CALCOCO1-214ENST00000549613 NRXN2Q9P2S2 1712 aa16.54■□□□□ 0.24
CALCOCO1-214ENST00000549613 ALDH1B1P30837 517 aa16.54■□□□□ 0.24
CALCOCO1-214ENST00000549613 FKBP4Q02790 459 aaKnown RBP eCLIP16.54■□□□□ 0.24
CALCOCO1-214ENST00000549613 CAVIN4Q5BKX8 364 aa16.54■□□□□ 0.24
CALCOCO1-214ENST00000549613 MSL1Q68DK7 614 aa16.54■□□□□ 0.24
CALCOCO1-214ENST00000549613 LEMD3Q9Y2U8 911 aa16.54■□□□□ 0.24
CALCOCO1-214ENST00000549613 ZFYP08048 801 aaPredicted RBP16.53■□□□□ 0.24
CALCOCO1-214ENST00000549613 NPR1P16066 1061 aa16.53■□□□□ 0.24
CALCOCO1-214ENST00000549613 ANO2Q9NQ90 1003 aa16.53■□□□□ 0.24
CALCOCO1-214ENST00000549613 PHKA1P46020 1223 aa16.52■□□□□ 0.24
CALCOCO1-214ENST00000549613 NMIQ13287 307 aaPredicted RBP16.52■□□□□ 0.24
CALCOCO1-214ENST00000549613 ZSCAN25Q6NSZ9 544 aa16.52■□□□□ 0.24
CALCOCO1-214ENST00000549613 EDC3Q96F86 508 aaKnown RBP16.52■□□□□ 0.24
CALCOCO1-214ENST00000549613 ARAP2Q8WZ64 1704 aa16.52■□□□□ 0.24
CALCOCO1-214ENST00000549613 TAF1P21675 1872 aa16.52■□□□□ 0.23
CALCOCO1-214ENST00000549613 ZNF804BA4D1E1 1349 aa16.51■□□□□ 0.23
CALCOCO1-214ENST00000549613 RNF113AO15541 343 aaKnown RBP16.51■□□□□ 0.23
CALCOCO1-214ENST00000549613 SRGNP10124 158 aa16.51■□□□□ 0.23
CALCOCO1-214ENST00000549613 MCAMP43121 646 aa16.51■□□□□ 0.23
CALCOCO1-214ENST00000549613 ZAP70P43403 619 aa16.51■□□□□ 0.23
CALCOCO1-214ENST00000549613 BECN1Q14457 450 aa16.51■□□□□ 0.23
CALCOCO1-214ENST00000549613 VPS37DQ86XT2 251 aa16.51■□□□□ 0.23
CALCOCO1-214ENST00000549613 MASTLQ96GX5 879 aa16.51■□□□□ 0.23
CALCOCO1-214ENST00000549613 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.51■□□□□ 0.23
CALCOCO1-214ENST00000549613 SNRKQ9NRH2 765 aa16.51■□□□□ 0.23
CALCOCO1-214ENST00000549613 HELLSQ9NRZ9 838 aa16.51■□□□□ 0.23
CALCOCO1-214ENST00000549613 ANKIB1Q9P2G1 1089 aa16.51■□□□□ 0.23
CALCOCO1-214ENST00000549613 DAXXQ9UER7 740 aaPredicted RBP16.51■□□□□ 0.23
CALCOCO1-214ENST00000549613 NDUFB9Q9Y6M9 179 aa16.51■□□□□ 0.23
CALCOCO1-214ENST00000549613 XDHP47989 1333 aa16.5■□□□□ 0.23
CALCOCO1-214ENST00000549613 SEMA3EO15041 775 aa16.5■□□□□ 0.23
CALCOCO1-214ENST00000549613 ZBTB22O15209 634 aa16.5■□□□□ 0.23
CALCOCO1-214ENST00000549613 ATP2B4P23634 1241 aa16.5■□□□□ 0.23
CALCOCO1-214ENST00000549613 SP8Q8IXZ3 490 aa16.5■□□□□ 0.23
CALCOCO1-214ENST00000549613 SPATA5Q8NB90 893 aa16.5■□□□□ 0.23
CALCOCO1-214ENST00000549613 TMX4Q9H1E5 349 aaPredicted RBP16.5■□□□□ 0.23
CALCOCO1-214ENST00000549613 SPON1Q9HCB6 807 aa16.5■□□□□ 0.23
CALCOCO1-214ENST00000549613 COL4A1P02462 1669 aa16.5■□□□□ 0.23
CALCOCO1-214ENST00000549613 H0YIN7 160 aa16.49■□□□□ 0.23
CALCOCO1-214ENST00000549613 SNAP23O00161 211 aa16.49■□□□□ 0.23
CALCOCO1-214ENST00000549613 BCAMP50895 628 aa16.49■□□□□ 0.23
CALCOCO1-214ENST00000549613 SCARF1Q14162 830 aa16.49■□□□□ 0.23
CALCOCO1-214ENST00000549613 MCMDC2Q4G0Z9 681 aa16.49■□□□□ 0.23
CALCOCO1-214ENST00000549613 FBXO33Q7Z6M2 555 aa16.49■□□□□ 0.23
CALCOCO1-214ENST00000549613 IL27Q8NEV9 243 aa16.49■□□□□ 0.23
CALCOCO1-214ENST00000549613 FAM227BQ96M60 508 aa16.49■□□□□ 0.23
CALCOCO1-214ENST00000549613 HMG20BQ9P0W2 317 aa16.49■□□□□ 0.23
CALCOCO1-214ENST00000549613 DENND2AQ9ULE3 1009 aa16.49■□□□□ 0.23
CALCOCO1-214ENST00000549613 PPEF1O14829 653 aaPredicted RBP16.48■□□□□ 0.23
CALCOCO1-214ENST00000549613 HIBADHP31937 336 aaKnown RBP16.48■□□□□ 0.23
CALCOCO1-214ENST00000549613 ANAPC15P60006 121 aa16.48■□□□□ 0.23
CALCOCO1-214ENST00000549613 ZMYM1Q5SVZ6 1142 aa16.48■□□□□ 0.23
CALCOCO1-214ENST00000549613 STYK1Q6J9G0 422 aa16.48■□□□□ 0.23
CALCOCO1-214ENST00000549613 C15orf52Q6ZUT6 534 aaKnown RBP16.48■□□□□ 0.23
CALCOCO1-214ENST00000549613 C2CD5Q86YS7 1000 aa16.48■□□□□ 0.23
CALCOCO1-214ENST00000549613 FAM84BQ96KN1 310 aaPredicted RBP16.48■□□□□ 0.23
CALCOCO1-214ENST00000549613 LSG1Q9H089 658 aaKnown RBP16.48■□□□□ 0.23
CALCOCO1-214ENST00000549613 ANTXR1Q9H6X2 564 aa16.48■□□□□ 0.23
CALCOCO1-214ENST00000549613 PODXL2Q9NZ53 605 aa16.48■□□□□ 0.23
CALCOCO1-214ENST00000549613 A0A1B0GUL6 1792 aa16.47■□□□□ 0.23
CALCOCO1-214ENST00000549613 A0A0D9SFI3 127 aa16.47■□□□□ 0.23
CALCOCO1-214ENST00000549613 CYP2E1P05181 493 aaPredicted RBP16.47■□□□□ 0.23
CALCOCO1-214ENST00000549613 GYG1P46976 350 aa16.47■□□□□ 0.23
CALCOCO1-214ENST00000549613 RABEP1Q15276 862 aa16.47■□□□□ 0.23
CALCOCO1-214ENST00000549613 GGA1Q9UJY5 639 aa16.47■□□□□ 0.23
CALCOCO1-214ENST00000549613 NSFL1CQ9UNZ2 370 aaKnown RBP16.47■□□□□ 0.23
CALCOCO1-214ENST00000549613 ATP6V0A2Q9Y487 856 aa16.47■□□□□ 0.23
CALCOCO1-214ENST00000549613 ANKRD31Q8N7Z5 1873 aa16.46■□□□□ 0.23
CALCOCO1-214ENST00000549613 HSPA4P34932 840 aa16.46■□□□□ 0.23
CALCOCO1-214ENST00000549613 GPSM2P81274 684 aa16.46■□□□□ 0.23
CALCOCO1-214ENST00000549613 MAP3K12Q12852 859 aa16.46■□□□□ 0.23
CALCOCO1-214ENST00000549613 RASGRF1Q13972 1273 aa16.46■□□□□ 0.23
CALCOCO1-214ENST00000549613 WASHC4Q2M389 1173 aa16.46■□□□□ 0.23
CALCOCO1-214ENST00000549613 CNKSR1Q969H4 720 aa16.46■□□□□ 0.23
CALCOCO1-214ENST00000549613 IL25Q9H293 177 aa16.46■□□□□ 0.23
CALCOCO1-214ENST00000549613 AKAP11Q9UKA4 1901 aa16.46■□□□□ 0.23
CALCOCO1-214ENST00000549613 PDS5AQ29RF7 1337 aaKnown RBP16.45■□□□□ 0.22
CALCOCO1-214ENST00000549613 CCDC171Q6TFL3 1326 aa16.45■□□□□ 0.22
CALCOCO1-214ENST00000549613 IGSF3O75054 1194 aa16.45■□□□□ 0.22
CALCOCO1-214ENST00000549613 FRAT2O75474 233 aaPredicted RBP16.45■□□□□ 0.22
CALCOCO1-214ENST00000549613 UBE3CQ15386 1083 aa16.45■□□□□ 0.22
CALCOCO1-214ENST00000549613 PI16Q6UXB8 463 aa16.45■□□□□ 0.22
CALCOCO1-214ENST00000549613 MAP4K1Q92918 833 aa16.45■□□□□ 0.22
CALCOCO1-214ENST00000549613 ZNF622Q969S3 477 aaKnown RBP eCLIP16.45■□□□□ 0.224e-7■■■□□ 18.3
CALCOCO1-214ENST00000549613 MED23Q9ULK4 1368 aa16.45■□□□□ 0.22
CALCOCO1-214ENST00000549613 ZNF804AQ7Z570 1209 aa16.44■□□□□ 0.22
CALCOCO1-214ENST00000549613 APPBP2Q92624 585 aa16.44■□□□□ 0.22
CALCOCO1-214ENST00000549613 SNX21Q969T3 373 aa16.44■□□□□ 0.22
CALCOCO1-214ENST00000549613 KIF2CQ99661 725 aa16.44■□□□□ 0.22
CALCOCO1-214ENST00000549613 PIH1D3Q9NQM4 214 aaKnown RBP16.44■□□□□ 0.22
CALCOCO1-214ENST00000549613 IDH1O75874 414 aaKnown RBP16.43■□□□□ 0.22
CALCOCO1-214ENST00000549613 UFL1O94874 794 aa16.43■□□□□ 0.22
CALCOCO1-214ENST00000549613 ADD2P35612 726 aa16.43■□□□□ 0.22
CALCOCO1-214ENST00000549613 SLC9C2Q5TAH2 1124 aa16.43■□□□□ 0.22
CALCOCO1-214ENST00000549613 RNF20Q5VTR2 975 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms