RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 CELF2O95319 508 aaKnown RBP23.56■■□□□ 1.36
CHMP1A-203ENST00000547614 KIF4BQ2VIQ3 1234 aa23.56■■□□□ 1.36
CHMP1A-203ENST00000547614 IFFO2Q5TF58 517 aa23.56■■□□□ 1.36
CHMP1A-203ENST00000547614 TLL2Q9Y6L7 1015 aa23.56■■□□□ 1.36
CHMP1A-203ENST00000547614 USP17L8P0C7I0 530 aa23.55■■□□□ 1.36
CHMP1A-203ENST00000547614 KCNJ4P48050 445 aa23.55■■□□□ 1.36
CHMP1A-203ENST00000547614 STRIP1Q5VSL9 837 aa23.55■■□□□ 1.36
CHMP1A-203ENST00000547614 USP48Q86UV5 1035 aa23.55■■□□□ 1.36
CHMP1A-203ENST00000547614 DCPSQ96C86 337 aaKnown RBP23.55■■□□□ 1.36
CHMP1A-203ENST00000547614 NBPF7P0C2Y1 421 aaPredicted RBP23.54■■□□□ 1.36
CHMP1A-203ENST00000547614 TAF7LQ5H9L4 462 aa23.54■■□□□ 1.36
CHMP1A-203ENST00000547614 LDHAL6AQ6ZMR3 332 aa23.54■■□□□ 1.36
CHMP1A-203ENST00000547614 C15orf52Q6ZUT6 534 aaKnown RBP23.54■■□□□ 1.36
CHMP1A-203ENST00000547614 KRT26Q7Z3Y9 468 aa23.54■■□□□ 1.36
CHMP1A-203ENST00000547614 KAZALD1Q96I82 304 aa23.54■■□□□ 1.36
CHMP1A-203ENST00000547614 MYO3BQ8WXR4 1341 aa23.54■■□□□ 1.36
CHMP1A-203ENST00000547614 WDR33Q9C0J8 1336 aaKnown RBP23.54■■□□□ 1.36
CHMP1A-203ENST00000547614 ECE1P42892 770 aa23.53■■□□□ 1.36
CHMP1A-203ENST00000547614 MMP14P50281 582 aa23.53■■□□□ 1.36
CHMP1A-203ENST00000547614 DACT2Q5SW24 774 aa23.53■■□□□ 1.36
CHMP1A-203ENST00000547614 SAPCD2Q86UD0 394 aa23.53■■□□□ 1.36
CHMP1A-203ENST00000547614 SUCLG2Q96I99 432 aa23.53■■□□□ 1.36
CHMP1A-203ENST00000547614 HHIPL1Q96JK4 782 aa23.53■■□□□ 1.36
CHMP1A-203ENST00000547614 TAF5LO75529 589 aa23.51■■□□□ 1.35
CHMP1A-203ENST00000547614 KLRK1P26718 216 aa23.51■■□□□ 1.35
CHMP1A-203ENST00000547614 TTLL5Q6EMB2 1281 aa23.51■■□□□ 1.35
CHMP1A-203ENST00000547614 HELBQ8NG08 1087 aaPredicted RBP23.51■■□□□ 1.35
CHMP1A-203ENST00000547614 ZNF594Q96JF6 807 aaPredicted RBP23.51■■□□□ 1.35
CHMP1A-203ENST00000547614 CAPNS2Q96L46 248 aa23.51■■□□□ 1.35
CHMP1A-203ENST00000547614 MYOZ2Q9NPC6 264 aa23.51■■□□□ 1.35
CHMP1A-203ENST00000547614 CNNM1Q9NRU3 951 aa23.51■■□□□ 1.35
CHMP1A-203ENST00000547614 SMC4Q9NTJ3 1288 aa23.51■■□□□ 1.35
CHMP1A-203ENST00000547614 RABL6Q3YEC7 729 aaPredicted RBP23.5■■□□□ 1.35
CHMP1A-203ENST00000547614 COL13A1Q5TAT6 717 aaPredicted RBP23.5■■□□□ 1.35
CHMP1A-203ENST00000547614 SULF1Q8IWU6 871 aa23.5■■□□□ 1.35
CHMP1A-203ENST00000547614 OGFOD1Q8N543 542 aa23.5■■□□□ 1.35
CHMP1A-203ENST00000547614 ZNF408Q9H9D4 720 aa23.5■■□□□ 1.35
CHMP1A-203ENST00000547614 CD209Q9NNX6 404 aa23.5■■□□□ 1.35
CHMP1A-203ENST00000547614 WBP1LQ9NX94 342 aa23.5■■□□□ 1.35
CHMP1A-203ENST00000547614 POLR2AP24928 1970 aaKnown RBP23.5■■□□□ 1.35
CHMP1A-203ENST00000547614 IRS2Q9Y4H2 1338 aa23.5■■□□□ 1.35
CHMP1A-203ENST00000547614 BRPF1P55201 1214 aaPredicted RBP23.49■■□□□ 1.35
CHMP1A-203ENST00000547614 MAP2K1Q02750 393 aaPredicted RBP23.49■■□□□ 1.35
CHMP1A-203ENST00000547614 SCARF1Q14162 830 aa23.49■■□□□ 1.35
CHMP1A-203ENST00000547614 USP44Q9H0E7 712 aa23.49■■□□□ 1.35
CHMP1A-203ENST00000547614 GGA3Q9NZ52 723 aa23.49■■□□□ 1.35
CHMP1A-203ENST00000547614 SNAP23O00161 211 aa23.48■■□□□ 1.35
CHMP1A-203ENST00000547614 CYP4F22Q6NT55 531 aa23.48■■□□□ 1.35
CHMP1A-203ENST00000547614 PAXIP1Q6ZW49 1069 aaPredicted RBP23.48■■□□□ 1.35
CHMP1A-203ENST00000547614 AIDAQ96BJ3 306 aa23.48■■□□□ 1.35
CHMP1A-203ENST00000547614 BICC1Q9H694 974 aaKnown RBP23.48■■□□□ 1.35
CHMP1A-203ENST00000547614 ZNF804AQ7Z570 1209 aa23.47■■□□□ 1.35
CHMP1A-203ENST00000547614 FBXW7Q969H0 707 aa23.47■■□□□ 1.35
CHMP1A-203ENST00000547614 MXD3Q9BW11 206 aa23.47■■□□□ 1.35
CHMP1A-203ENST00000547614 PITPNM2Q9BZ72 1349 aa23.47■■□□□ 1.35
CHMP1A-203ENST00000547614 ADM5C9JUS6 153 aa23.46■■□□□ 1.35
CHMP1A-203ENST00000547614 ZNF646O15015 1829 aaPredicted RBP23.46■■□□□ 1.35
CHMP1A-203ENST00000547614 FOXN1O15353 648 aa23.46■■□□□ 1.35
CHMP1A-203ENST00000547614 ASTN2O75129 1339 aaPredicted RBP23.46■■□□□ 1.35
CHMP1A-203ENST00000547614 MAP2K2P36507 400 aa23.46■■□□□ 1.35
CHMP1A-203ENST00000547614 GTF2IP78347 998 aa23.46■■□□□ 1.35
CHMP1A-203ENST00000547614 ANGEL2Q5VTE6 544 aaKnown RBP23.46■■□□□ 1.35
CHMP1A-203ENST00000547614 DLK2Q6UY11 383 aa23.46■■□□□ 1.35
CHMP1A-203ENST00000547614 A0A1B0GUL6 1792 aa23.45■■□□□ 1.34
CHMP1A-203ENST00000547614 PLIN1O60240 522 aa23.45■■□□□ 1.34
CHMP1A-203ENST00000547614 IL1R1P14778 569 aa23.45■■□□□ 1.34
CHMP1A-203ENST00000547614 UBE4AQ14139 1066 aa23.45■■□□□ 1.34
CHMP1A-203ENST00000547614 ANKRD44Q8N8A2 993 aa23.45■■□□□ 1.34
CHMP1A-203ENST00000547614 RIPOR2Q9Y4F9 1068 aa23.45■■□□□ 1.34
CHMP1A-203ENST00000547614 CTCFP49711 727 aaPredicted RBP23.44■■□□□ 1.34
CHMP1A-203ENST00000547614 C2orf69Q8N8R5 385 aa23.44■■□□□ 1.34
CHMP1A-203ENST00000547614 GBA2Q9HCG7 927 aaPredicted RBP23.44■■□□□ 1.34
CHMP1A-203ENST00000547614 HDAC9Q9UKV0 1011 aa23.44■■□□□ 1.34
CHMP1A-203ENST00000547614 MROH5Q6ZUA9 1318 aa23.43■■□□□ 1.34
CHMP1A-203ENST00000547614 HUNKP57058 714 aa23.43■■□□□ 1.34
CHMP1A-203ENST00000547614 DIEXFQ68CQ4 756 aaKnown RBP23.43■■□□□ 1.34
CHMP1A-203ENST00000547614 PUS3Q9BZE2 481 aaKnown RBP23.43■■□□□ 1.34
CHMP1A-203ENST00000547614 NOB1Q9ULX3 412 aaKnown RBP23.43■■□□□ 1.34
CHMP1A-203ENST00000547614 THSD7BQ9C0I4 1608 aa23.43■■□□□ 1.34
CHMP1A-203ENST00000547614 WNT10BO00744 389 aa23.42■■□□□ 1.34
CHMP1A-203ENST00000547614 RARSP54136 660 aaKnown RBP23.42■■□□□ 1.34
CHMP1A-203ENST00000547614 FKBP1AP62942 108 aaKnown RBP23.42■■□□□ 1.34
CHMP1A-203ENST00000547614 GRM1Q13255 1194 aa23.42■■□□□ 1.34
CHMP1A-203ENST00000547614 NBPF9Q3BBW0 867 aa23.42■■□□□ 1.34
CHMP1A-203ENST00000547614 API5Q9BZZ5 524 aaKnown RBP23.42■■□□□ 1.34
CHMP1A-203ENST00000547614 PRDM10Q9NQV6 1147 aa23.42■■□□□ 1.34
CHMP1A-203ENST00000547614 KIAA0825Q8IV33 1275 aa23.41■■□□□ 1.34
CHMP1A-203ENST00000547614 CDCA5Q96FF9 252 aa23.41■■□□□ 1.34
CHMP1A-203ENST00000547614 SASH1O94885 1247 aa23.4■■□□□ 1.34
CHMP1A-203ENST00000547614 MIER1Q8N108 512 aa23.4■■□□□ 1.34
CHMP1A-203ENST00000547614 TNS4Q8IZW8 715 aa23.39■■□□□ 1.33
CHMP1A-203ENST00000547614 CERS5Q8N5B7 392 aa23.39■■□□□ 1.33
CHMP1A-203ENST00000547614 ARHGAP45Q92619 1136 aa23.39■■□□□ 1.33
CHMP1A-203ENST00000547614 ZBED3Q96IU2 234 aaPredicted RBP23.39■■□□□ 1.33
CHMP1A-203ENST00000547614 BEGAINQ9BUH8 593 aa23.39■■□□□ 1.33
CHMP1A-203ENST00000547614 AOC2O75106 756 aa23.38■■□□□ 1.33
CHMP1A-203ENST00000547614 HIBADHP31937 336 aaKnown RBP23.38■■□□□ 1.33
CHMP1A-203ENST00000547614 FKBP1BP68106 108 aa23.38■■□□□ 1.33
CHMP1A-203ENST00000547614 NOGQ13253 232 aa23.38■■□□□ 1.33
CHMP1A-203ENST00000547614 LRRC24Q50LG9 513 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms