RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 COA1Q9GZY4 146 aa14.79□□□□□ -0.04
RAB5C-204ENST00000547517 ADARB2Q9NS39 739 aaKnown RBP14.79□□□□□ -0.04
RAB5C-204ENST00000547517 HDAC5Q9UQL6 1122 aa14.79□□□□□ -0.04
RAB5C-204ENST00000547517 IRS2Q9Y4H2 1338 aa14.78□□□□□ -0.04
RAB5C-204ENST00000547517 RPS12P25398 132 aaKnown RBP14.78□□□□□ -0.04
RAB5C-204ENST00000547517 RFX5P48382 616 aaPredicted RBP14.78□□□□□ -0.04
RAB5C-204ENST00000547517 USP50Q70EL3 339 aaPredicted RBP14.78□□□□□ -0.04
RAB5C-204ENST00000547517 ITPRIPQ8IWB1 547 aa14.78□□□□□ -0.04
RAB5C-204ENST00000547517 DZIP1LQ8IYY4 767 aaKnown RBP14.78□□□□□ -0.04
RAB5C-204ENST00000547517 TRPM4Q8TD43 1214 aa14.78□□□□□ -0.04
RAB5C-204ENST00000547517 YTHDC1Q96MU7 727 aaKnown RBP14.78□□□□□ -0.04
RAB5C-204ENST00000547517 CNOT7Q9UIV1 285 aaKnown RBP14.78□□□□□ -0.04
RAB5C-204ENST00000547517 RIPOR2Q9Y4F9 1068 aa14.78□□□□□ -0.04
RAB5C-204ENST00000547517 ZNF646O15015 1829 aaPredicted RBP14.78□□□□□ -0.04
RAB5C-204ENST00000547517 USP17L3A6NCW0 530 aa14.77□□□□□ -0.05
RAB5C-204ENST00000547517 USP17L4A6NCW7 530 aa14.77□□□□□ -0.05
RAB5C-204ENST00000547517 VIL1P09327 827 aaKnown RBP14.77□□□□□ -0.05
RAB5C-204ENST00000547517 RLBP1P12271 317 aa14.77□□□□□ -0.05
RAB5C-204ENST00000547517 APLP1P51693 650 aa14.77□□□□□ -0.05
RAB5C-204ENST00000547517 MAP1SQ66K74 1059 aaPredicted RBP14.77□□□□□ -0.05
RAB5C-204ENST00000547517 RSBN1LQ6PCB5 846 aaPredicted RBP14.77□□□□□ -0.05
RAB5C-204ENST00000547517 USP17L1Q7RTZ2 530 aa14.77□□□□□ -0.05
RAB5C-204ENST00000547517 ZNF804AQ7Z570 1209 aa14.77□□□□□ -0.05
RAB5C-204ENST00000547517 DPF2Q92785 391 aa14.77□□□□□ -0.05
RAB5C-204ENST00000547517 SIL1Q9H173 461 aa14.77□□□□□ -0.05
RAB5C-204ENST00000547517 RCAN3Q9UKA8 241 aa14.77□□□□□ -0.05
RAB5C-204ENST00000547517 ZNF609O15014 1411 aa14.76□□□□□ -0.05
RAB5C-204ENST00000547517 H7C1D1 291 aa14.76□□□□□ -0.05
RAB5C-204ENST00000547517 HTRA3P83110 453 aa14.76□□□□□ -0.05
RAB5C-204ENST00000547517 PTPN12Q05209 780 aaKnown RBP14.76□□□□□ -0.05
RAB5C-204ENST00000547517 C15orf52Q6ZUT6 534 aaKnown RBP14.76□□□□□ -0.05
RAB5C-204ENST00000547517 MXD3Q9BW11 206 aa14.76□□□□□ -0.05
RAB5C-204ENST00000547517 CEP350Q5VT06 3117 aa14.75□□□□□ -0.05
RAB5C-204ENST00000547517 EYA2O00167 538 aa14.75□□□□□ -0.05
RAB5C-204ENST00000547517 GNAI2P04899 355 aa14.75□□□□□ -0.05
RAB5C-204ENST00000547517 UBE4AQ14139 1066 aa14.75□□□□□ -0.05
RAB5C-204ENST00000547517 TBC1D10BQ4KMP7 808 aaPredicted RBP14.75□□□□□ -0.05
RAB5C-204ENST00000547517 SAMD7Q7Z3H4 446 aa14.75□□□□□ -0.05
RAB5C-204ENST00000547517 VGLL2Q8N8G2 317 aa14.75□□□□□ -0.05
RAB5C-204ENST00000547517 CD209Q9NNX6 404 aa14.75□□□□□ -0.05
RAB5C-204ENST00000547517 PA2G4Q9UQ80 394 aaKnown RBP14.75□□□□□ -0.05
RAB5C-204ENST00000547517 SRGAP3O43295 1099 aa14.74□□□□□ -0.05
RAB5C-204ENST00000547517 EGFRP00533 1210 aa14.74□□□□□ -0.05
RAB5C-204ENST00000547517 GYG1P46976 350 aa14.74□□□□□ -0.05
RAB5C-204ENST00000547517 GTF2IP78347 998 aa14.74□□□□□ -0.05
RAB5C-204ENST00000547517 KIF4BQ2VIQ3 1234 aa14.74□□□□□ -0.05
RAB5C-204ENST00000547517 DACT2Q5SW24 774 aa14.74□□□□□ -0.05
RAB5C-204ENST00000547517 RBM26Q5T8P6 1007 aaKnown RBP14.74□□□□□ -0.05
RAB5C-204ENST00000547517 STRIP1Q5VSL9 837 aa14.74□□□□□ -0.05
RAB5C-204ENST00000547517 CNTROBQ8N137 903 aa14.74□□□□□ -0.05
RAB5C-204ENST00000547517 AGBL3Q8NEM8 1001 aa14.74□□□□□ -0.05
RAB5C-204ENST00000547517 PANK1Q8TE04 598 aa14.74□□□□□ -0.05
RAB5C-204ENST00000547517 PASKQ96RG2 1323 aa14.73□□□□□ -0.05
RAB5C-204ENST00000547517 CIAO1O76071 339 aa14.73□□□□□ -0.05
RAB5C-204ENST00000547517 PDE8BO95263 885 aa14.73□□□□□ -0.05
RAB5C-204ENST00000547517 HIRAP54198 1017 aaPredicted RBP14.73□□□□□ -0.05
RAB5C-204ENST00000547517 PUM3Q15397 648 aaKnown RBP14.73□□□□□ -0.05
RAB5C-204ENST00000547517 TTLL5Q6EMB2 1281 aa14.73□□□□□ -0.05
RAB5C-204ENST00000547517 ATG9AQ7Z3C6 839 aa14.73□□□□□ -0.05
RAB5C-204ENST00000547517 C1orf115Q9H7X2 142 aa14.73□□□□□ -0.05
RAB5C-204ENST00000547517 JAG2Q9Y219 1238 aa14.73□□□□□ -0.05
RAB5C-204ENST00000547517 MYO3BQ8WXR4 1341 aa14.72□□□□□ -0.05
RAB5C-204ENST00000547517 ITGBL1O95965 494 aaPredicted RBP14.72□□□□□ -0.05
RAB5C-204ENST00000547517 USP17L8P0C7I0 530 aa14.72□□□□□ -0.05
RAB5C-204ENST00000547517 IL1R1P14778 569 aa14.72□□□□□ -0.05
RAB5C-204ENST00000547517 MTX1Q13505 466 aa14.72□□□□□ -0.05
RAB5C-204ENST00000547517 GMLQ99445 158 aa14.72□□□□□ -0.05
RAB5C-204ENST00000547517 PNMA6EA0A0J9YXQ4 647 aa14.71□□□□□ -0.05
RAB5C-204ENST00000547517 HIBADHP31937 336 aaKnown RBP14.71□□□□□ -0.05
RAB5C-204ENST00000547517 ZNF280AP59817 542 aaPredicted RBP14.71□□□□□ -0.05
RAB5C-204ENST00000547517 VPS37DQ86XT2 251 aa14.71□□□□□ -0.05
RAB5C-204ENST00000547517 FAM84BQ96KN1 310 aaPredicted RBP14.71□□□□□ -0.05
RAB5C-204ENST00000547517 COPRSQ9NQ92 184 aa14.71□□□□□ -0.05
RAB5C-204ENST00000547517 FBXO3Q9UK99 471 aa14.71□□□□□ -0.05
RAB5C-204ENST00000547517 TRAF5O00463 557 aa14.7□□□□□ -0.06
RAB5C-204ENST00000547517 IFIT1P09914 478 aaKnown RBP14.7□□□□□ -0.06
RAB5C-204ENST00000547517 MS4A1P11836 297 aa14.7□□□□□ -0.06
RAB5C-204ENST00000547517 SLC5A1P13866 664 aa14.7□□□□□ -0.06
RAB5C-204ENST00000547517 FGFR2P21802 821 aa14.7□□□□□ -0.06
RAB5C-204ENST00000547517 IL15P40933 162 aaPredicted RBP14.7□□□□□ -0.06
RAB5C-204ENST00000547517 CAVIN4Q5BKX8 364 aa14.7□□□□□ -0.06
RAB5C-204ENST00000547517 KIAA0825Q8IV33 1275 aa14.7□□□□□ -0.06
RAB5C-204ENST00000547517 ZC3H15Q8WU90 426 aaKnown RBP14.7□□□□□ -0.06
RAB5C-204ENST00000547517 GLIS2Q9BZE0 524 aaPredicted RBP14.7□□□□□ -0.06
RAB5C-204ENST00000547517 MYOZ2Q9NPC6 264 aa14.7□□□□□ -0.06
RAB5C-204ENST00000547517 GGA3Q9NZ52 723 aa14.7□□□□□ -0.06
RAB5C-204ENST00000547517 ARAP2Q8WZ64 1704 aa14.69□□□□□ -0.06
RAB5C-204ENST00000547517 ASTN2O75129 1339 aaPredicted RBP14.69□□□□□ -0.06
RAB5C-204ENST00000547517 ZBTB7BO15156 539 aaPredicted RBP14.69□□□□□ -0.06
RAB5C-204ENST00000547517 SLC34A2O95436 690 aa14.69□□□□□ -0.06
RAB5C-204ENST00000547517 FMR1Q06787 632 aaKnown RBP eCLIP14.69□□□□□ -0.06
RAB5C-204ENST00000547517 OGFOD1Q8N543 542 aa14.69□□□□□ -0.06
RAB5C-204ENST00000547517 CERS5Q8N5B7 392 aa14.69□□□□□ -0.06
RAB5C-204ENST00000547517 TDRD7Q8NHU6 1098 aaKnown RBP14.69□□□□□ -0.06
RAB5C-204ENST00000547517 LPIN2Q92539 896 aa14.69□□□□□ -0.06
RAB5C-204ENST00000547517 CREBZFQ9NS37 354 aa14.69□□□□□ -0.06
RAB5C-204ENST00000547517 CEP126Q9P2H0 1117 aa14.69□□□□□ -0.06
RAB5C-204ENST00000547517 IQSEC3Q9UPP2 1182 aaPredicted RBP14.69□□□□□ -0.06
RAB5C-204ENST00000547517 F8W031 263 aaPredicted RBP14.68□□□□□ -0.06
RAB5C-204ENST00000547517 FRAT2O75474 233 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms