RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 NDUFAB1O14561 156 aa21.86■■□□□ 1.09
HDAC4-215ENST00000543185 WDR78Q5VTH9 848 aa21.86■■□□□ 1.09
HDAC4-215ENST00000543185 CCDC144CPQ8IYA2 1237 aa21.86■■□□□ 1.09
HDAC4-215ENST00000543185 KCNH5Q8NCM2 988 aa21.86■■□□□ 1.09
HDAC4-215ENST00000543185 PPFIA3O75145 1194 aa21.86■■□□□ 1.09
HDAC4-215ENST00000543185 RAB3IPQ96QF0 476 aaPredicted RBP21.86■■□□□ 1.09
HDAC4-215ENST00000543185 GIMAP6Q6P9H5 292 aa21.85■■□□□ 1.09
HDAC4-215ENST00000543185 NEK11Q8NG66 645 aa21.85■■□□□ 1.09
HDAC4-215ENST00000543185 IMPACTQ9P2X3 320 aa21.85■■□□□ 1.09
HDAC4-215ENST00000543185 PPP1R7Q15435 360 aa21.85■■□□□ 1.09
HDAC4-215ENST00000543185 UTP14AQ9BVJ6 771 aaKnown RBP21.85■■□□□ 1.09
HDAC4-215ENST00000543185 BAG3O95817 575 aa21.85■■□□□ 1.09
HDAC4-215ENST00000543185 NESP48681 1621 aa21.85■■□□□ 1.09
HDAC4-215ENST00000543185 MAP2K2P36507 400 aa21.85■■□□□ 1.09
HDAC4-215ENST00000543185 RPGRIP1Q96KN7 1286 aa21.85■■□□□ 1.09
HDAC4-215ENST00000543185 BOLA2Q9H3K6 86 aa21.85■■□□□ 1.09
HDAC4-215ENST00000543185 NUTM2AQ8IVF1 878 aaPredicted RBP21.85■■□□□ 1.09
HDAC4-215ENST00000543185 CHMP4BP1P59074 171 aa21.84■■□□□ 1.09
HDAC4-215ENST00000543185 VWA3BQ502W6 1294 aa21.84■■□□□ 1.09
HDAC4-215ENST00000543185 TRIM27P14373 513 aa21.84■■□□□ 1.09
HDAC4-215ENST00000543185 CALML3P27482 149 aa21.84■■□□□ 1.09
HDAC4-215ENST00000543185 RAB3GAP1Q15042 981 aa21.84■■□□□ 1.09
HDAC4-215ENST00000543185 MCUR1Q96AQ8 359 aa21.84■■□□□ 1.09
HDAC4-215ENST00000543185 IQCDQ96DY2 449 aa21.84■■□□□ 1.09
HDAC4-215ENST00000543185 PPP2R3AQ06190 1150 aa21.84■■□□□ 1.09
HDAC4-215ENST00000543185 TTF2Q9UNY4 1162 aaKnown RBP21.84■■□□□ 1.09
HDAC4-215ENST00000543185 KDM5AP29375 1690 aaKnown RBP21.84■■□□□ 1.09
HDAC4-215ENST00000543185 IDEP14735 1019 aa21.84■■□□□ 1.09
HDAC4-215ENST00000543185 RRAGBQ5VZM2 374 aa21.84■■□□□ 1.09
HDAC4-215ENST00000543185 TMEM132EQ6IEE7 984 aa21.84■■□□□ 1.09
HDAC4-215ENST00000543185 USP48Q86UV5 1035 aa21.84■■□□□ 1.09
HDAC4-215ENST00000543185 ORC3Q9UBD5 711 aaPredicted RBP21.84■■□□□ 1.09
HDAC4-215ENST00000543185 CCDC186Q7Z3E2 898 aa21.83■■□□□ 1.09
HDAC4-215ENST00000543185 ATP6V0A2Q9Y487 856 aa21.83■■□□□ 1.09
HDAC4-215ENST00000543185 GNAQP50148 359 aa21.83■■□□□ 1.09
HDAC4-215ENST00000543185 TAF7Q15545 349 aaPredicted RBP21.83■■□□□ 1.09
HDAC4-215ENST00000543185 SEL1L2Q5TEA6 688 aa21.83■■□□□ 1.09
HDAC4-215ENST00000543185 USP16Q9Y5T5 823 aa21.83■■□□□ 1.09
HDAC4-215ENST00000543185 UBXN1Q04323 297 aa21.83■■□□□ 1.09
HDAC4-215ENST00000543185 KAT14Q9H8E8 782 aa21.83■■□□□ 1.09
HDAC4-215ENST00000543185 TROQ12816 1431 aaPredicted RBP21.83■■□□□ 1.08
HDAC4-215ENST00000543185 ESCO1Q5FWF5 840 aa21.83■■□□□ 1.08
HDAC4-215ENST00000543185 ARHGAP45Q92619 1136 aa21.83■■□□□ 1.08
HDAC4-215ENST00000543185 EPSTI1Q96J88 318 aa21.83■■□□□ 1.08
HDAC4-215ENST00000543185 AQRO60306 1485 aaKnown RBP eCLIP21.83■■□□□ 1.086e-9■■■■■ 37.6
HDAC4-215ENST00000543185 MTMR3Q13615 1198 aa21.83■■□□□ 1.08
HDAC4-215ENST00000543185 NUTM2GQ5VZR2 741 aa21.83■■□□□ 1.08
HDAC4-215ENST00000543185 PUF60Q9UHX1 559 aaKnown RBP21.83■■□□□ 1.08
HDAC4-215ENST00000543185 RTL9Q8NET4 1388 aa21.83■■□□□ 1.08
HDAC4-215ENST00000543185 DCAF8L1A6NGE4 600 aa21.82■■□□□ 1.08
HDAC4-215ENST00000543185 TSKSQ9UJT2 592 aa21.82■■□□□ 1.08
HDAC4-215ENST00000543185 CCT2P78371 535 aaKnown RBP21.82■■□□□ 1.08
HDAC4-215ENST00000543185 AOPEPQ8N6M6 819 aa21.82■■□□□ 1.08
HDAC4-215ENST00000543185 UBL4BQ8N7F7 174 aa21.82■■□□□ 1.08
HDAC4-215ENST00000543185 INF2Q27J81 1249 aa21.82■■□□□ 1.08
HDAC4-215ENST00000543185 MICU3Q86XE3 530 aa21.82■■□□□ 1.08
HDAC4-215ENST00000543185 RNF10Q8N5U6 811 aaKnown RBP21.82■■□□□ 1.08
HDAC4-215ENST00000543185 DBF4Q9UBU7 674 aaPredicted RBP21.82■■□□□ 1.08
HDAC4-215ENST00000543185 F13A1P00488 732 aa21.82■■□□□ 1.08
HDAC4-215ENST00000543185 SLC8A1P32418 973 aa21.82■■□□□ 1.08
HDAC4-215ENST00000543185 MYCBPQ99417 103 aaPredicted RBP21.82■■□□□ 1.08
HDAC4-215ENST00000543185 TMX3Q96JJ7 454 aa21.82■■□□□ 1.08
HDAC4-215ENST00000543185 CFAP70Q5T0N1 1121 aa21.81■■□□□ 1.08
HDAC4-215ENST00000543185 ANKIB1Q9P2G1 1089 aa21.81■■□□□ 1.08
HDAC4-215ENST00000543185 THOC2Q8NI27 1593 aaKnown RBP21.81■■□□□ 1.08
HDAC4-215ENST00000543185 UBLCP1Q8WVY7 318 aaPredicted RBP21.81■■□□□ 1.08
HDAC4-215ENST00000543185 ARL1P40616 181 aaPredicted RBP21.81■■□□□ 1.08
HDAC4-215ENST00000543185 ELP1O95163 1332 aa21.81■■□□□ 1.08
HDAC4-215ENST00000543185 BICD1Q96G01 975 aa21.81■■□□□ 1.08
HDAC4-215ENST00000543185 BAG1Q99933 345 aaPredicted RBP21.81■■□□□ 1.08
HDAC4-215ENST00000543185 MYRIPQ8NFW9 859 aa21.8■■□□□ 1.08
HDAC4-215ENST00000543185 SLC12A5Q9H2X9 1139 aa21.8■■□□□ 1.08
HDAC4-215ENST00000543185 CNPY2Q9Y2B0 182 aa21.8■■□□□ 1.08
HDAC4-215ENST00000543185 GSTO1P78417 241 aa21.8■■□□□ 1.08
HDAC4-215ENST00000543185 SUDS3Q9H7L9 328 aaPredicted RBP21.8■■□□□ 1.08
HDAC4-215ENST00000543185 CABP1Q9NZU7 370 aa21.8■■□□□ 1.08
HDAC4-215ENST00000543185 IGF1RP08069 1367 aa21.8■■□□□ 1.08
HDAC4-215ENST00000543185 CETN3O15182 167 aa21.8■■□□□ 1.08
HDAC4-215ENST00000543185 VPS52Q8N1B4 723 aa21.8■■□□□ 1.08
HDAC4-215ENST00000543185 I3L4J1 428 aa21.8■■□□□ 1.08
HDAC4-215ENST00000543185 TBC1D31Q96DN5 1066 aa21.8■■□□□ 1.08
HDAC4-215ENST00000543185 GUCA1BQ9UMX6 200 aa21.8■■□□□ 1.08
HDAC4-215ENST00000543185 SEPT14Q6ZU15 432 aa21.79■■□□□ 1.08
HDAC4-215ENST00000543185 SMC5Q8IY18 1101 aa21.79■■□□□ 1.08
HDAC4-215ENST00000543185 GOLGA6BA6NDN3 693 aa21.79■■□□□ 1.08
HDAC4-215ENST00000543185 THEGQ9P2T0 379 aa21.79■■□□□ 1.08
HDAC4-215ENST00000543185 AKR1B15C9JRZ8 316 aaPredicted RBP21.79■■□□□ 1.08
HDAC4-215ENST00000543185 NAPGQ99747 312 aaPredicted RBP21.79■■□□□ 1.08
HDAC4-215ENST00000543185 Q9H521 79 aa21.79■■□□□ 1.08
HDAC4-215ENST00000543185 TOM1L2Q6ZVM7 507 aa21.79■■□□□ 1.08
HDAC4-215ENST00000543185 SNAPC4Q5SXM2 1469 aa21.78■■□□□ 1.08
HDAC4-215ENST00000543185 IFT81Q8WYA0 676 aa21.78■■□□□ 1.08
HDAC4-215ENST00000543185 GDPD2Q9HCC8 539 aa21.78■■□□□ 1.08
HDAC4-215ENST00000543185 FAM177BA6PVY3 158 aa21.78■■□□□ 1.08
HDAC4-215ENST00000543185 CYP26C1Q6V0L0 522 aa21.78■■□□□ 1.08
HDAC4-215ENST00000543185 ZGPATQ8N5A5 531 aaKnown RBP21.78■■□□□ 1.08
HDAC4-215ENST00000543185 KIFAP3Q92845 792 aa21.78■■□□□ 1.08
HDAC4-215ENST00000543185 SCAF11Q99590 1463 aaKnown RBP21.77■■□□□ 1.08
HDAC4-215ENST00000543185 SPTLC2O15270 562 aa21.77■■□□□ 1.08
HDAC4-215ENST00000543185 EVCP57679 992 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms