RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 ITGBL1O95965 494 aaPredicted RBP12.28□□□□□ -0.44
TNFRSF1A-214ENST00000543048 CCT4P50991 539 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-214ENST00000543048 BRPF1P55201 1214 aaPredicted RBP12.28□□□□□ -0.44
TNFRSF1A-214ENST00000543048 HTRA3P83110 453 aa12.28□□□□□ -0.44
TNFRSF1A-214ENST00000543048 CCDC57Q2TAC2 916 aa12.28□□□□□ -0.44
TNFRSF1A-214ENST00000543048 EPHA10Q5JZY3 1008 aa12.28□□□□□ -0.44
TNFRSF1A-214ENST00000543048 CNTROBQ8N137 903 aa12.28□□□□□ -0.44
TNFRSF1A-214ENST00000543048 DPF2Q92785 391 aa12.28□□□□□ -0.44
TNFRSF1A-214ENST00000543048 KCNQ5Q9NR82 932 aa12.28□□□□□ -0.44
TNFRSF1A-214ENST00000543048 UTYO14607 1347 aa12.28□□□□□ -0.44
TNFRSF1A-214ENST00000543048 WTIPA6NIX2 430 aaPredicted RBP12.27□□□□□ -0.45
TNFRSF1A-214ENST00000543048 VIL1P09327 827 aaKnown RBP12.27□□□□□ -0.45
TNFRSF1A-214ENST00000543048 NBPF7P0C2Y1 421 aaPredicted RBP12.27□□□□□ -0.45
TNFRSF1A-214ENST00000543048 HNRNPUQ00839 825 aaKnown RBP eCLIP12.27□□□□□ -0.45
TNFRSF1A-214ENST00000543048 NOB1Q9ULX3 412 aaKnown RBP12.27□□□□□ -0.45
TNFRSF1A-214ENST00000543048 RPS12P25398 132 aaKnown RBP12.26□□□□□ -0.45
TNFRSF1A-214ENST00000543048 NUBP1P53384 320 aa12.26□□□□□ -0.45
TNFRSF1A-214ENST00000543048 RARSP54136 660 aaKnown RBP12.26□□□□□ -0.45
TNFRSF1A-214ENST00000543048 CHRNDQ07001 517 aa12.26□□□□□ -0.45
TNFRSF1A-214ENST00000543048 TAF7LQ5H9L4 462 aa12.26□□□□□ -0.45
TNFRSF1A-214ENST00000543048 MAP1SQ66K74 1059 aaPredicted RBP12.26□□□□□ -0.45
TNFRSF1A-214ENST00000543048 PODNQ7Z5L7 613 aa12.26□□□□□ -0.45
TNFRSF1A-214ENST00000543048 KAZALD1Q96I82 304 aa12.26□□□□□ -0.45
TNFRSF1A-214ENST00000543048 SUCLG2Q96I99 432 aa12.26□□□□□ -0.45
TNFRSF1A-214ENST00000543048 USP44Q9H0E7 712 aa12.26□□□□□ -0.45
TNFRSF1A-214ENST00000543048 ZNF804BA4D1E1 1349 aa12.26□□□□□ -0.45
TNFRSF1A-214ENST00000543048 PASKQ96RG2 1323 aa12.26□□□□□ -0.45
TNFRSF1A-214ENST00000543048 LDHAL6AQ6ZMR3 332 aa12.25□□□□□ -0.45
TNFRSF1A-214ENST00000543048 KLRG1Q96E93 195 aa12.25□□□□□ -0.45
TNFRSF1A-214ENST00000543048 ZNF594Q96JF6 807 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF1A-214ENST00000543048 API5Q9BZZ5 524 aaKnown RBP12.25□□□□□ -0.45
TNFRSF1A-214ENST00000543048 PGAP2Q9UHJ9 254 aa12.25□□□□□ -0.45
TNFRSF1A-214ENST00000543048 A0A1B0GUL6 1792 aa12.24□□□□□ -0.45
TNFRSF1A-214ENST00000543048 USP17L3A6NCW0 530 aa12.24□□□□□ -0.45
TNFRSF1A-214ENST00000543048 USP17L4A6NCW7 530 aa12.24□□□□□ -0.45
TNFRSF1A-214ENST00000543048 KCNJ4P48050 445 aa12.24□□□□□ -0.45
TNFRSF1A-214ENST00000543048 HIRAP54198 1017 aaPredicted RBP12.24□□□□□ -0.45
TNFRSF1A-214ENST00000543048 USP17L1Q7RTZ2 530 aa12.24□□□□□ -0.45
TNFRSF1A-214ENST00000543048 MICALL2Q8IY33 904 aa12.24□□□□□ -0.45
TNFRSF1A-214ENST00000543048 HELBQ8NG08 1087 aaPredicted RBP12.24□□□□□ -0.45
TNFRSF1A-214ENST00000543048 ZC3H15Q8WU90 426 aaKnown RBP12.24□□□□□ -0.45
TNFRSF1A-214ENST00000543048 ARHGAP45Q92619 1136 aa12.24□□□□□ -0.45
TNFRSF1A-214ENST00000543048 COA1Q9GZY4 146 aa12.24□□□□□ -0.45
TNFRSF1A-214ENST00000543048 CNNM1Q9NRU3 951 aa12.24□□□□□ -0.45
TNFRSF1A-214ENST00000543048 MED23Q9ULK4 1368 aa12.24□□□□□ -0.45
TNFRSF1A-214ENST00000543048 SHTN1A0MZ66 631 aa12.23□□□□□ -0.45
TNFRSF1A-214ENST00000543048 TMEM88BA6NKF7 163 aa12.23□□□□□ -0.45
TNFRSF1A-214ENST00000543048 IPO8O15397 1037 aaKnown RBP12.23□□□□□ -0.45
TNFRSF1A-214ENST00000543048 TAF5LO75529 589 aa12.23□□□□□ -0.45
TNFRSF1A-214ENST00000543048 RABL6Q3YEC7 729 aaPredicted RBP12.23□□□□□ -0.45
TNFRSF1A-214ENST00000543048 RSBN1LQ6PCB5 846 aaPredicted RBP12.23□□□□□ -0.45
TNFRSF1A-214ENST00000543048 TXNRD3Q86VQ6 643 aa12.23□□□□□ -0.45
TNFRSF1A-214ENST00000543048 ZNF579Q8NAF0 562 aaKnown RBP12.23□□□□□ -0.45
TNFRSF1A-214ENST00000543048 AGBL3Q8NEM8 1001 aa12.23□□□□□ -0.45
TNFRSF1A-214ENST00000543048 BICC1Q9H694 974 aaKnown RBP12.23□□□□□ -0.45
TNFRSF1A-214ENST00000543048 PLIN1O60240 522 aa12.22□□□□□ -0.45
TNFRSF1A-214ENST00000543048 RBM26Q5T8P6 1007 aaKnown RBP12.22□□□□□ -0.45
TNFRSF1A-214ENST00000543048 C15orf52Q6ZUT6 534 aaKnown RBP12.22□□□□□ -0.45
TNFRSF1A-214ENST00000543048 SAMD7Q7Z3H4 446 aa12.22□□□□□ -0.45
TNFRSF1A-214ENST00000543048 ANKRD44Q8N8A2 993 aa12.22□□□□□ -0.45
TNFRSF1A-214ENST00000543048 TRPM4Q8TD43 1214 aa12.22□□□□□ -0.45
TNFRSF1A-214ENST00000543048 HDAC5Q9UQL6 1122 aa12.22□□□□□ -0.45
TNFRSF1A-214ENST00000543048 TBC1D10BQ4KMP7 808 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF1A-214ENST00000543048 STRIP1Q5VSL9 837 aa12.21□□□□□ -0.45
TNFRSF1A-214ENST00000543048 TTLL5Q6EMB2 1281 aa12.21□□□□□ -0.45
TNFRSF1A-214ENST00000543048 JMYQ8N9B5 988 aa12.21□□□□□ -0.45
TNFRSF1A-214ENST00000543048 FAM212AQ96EL1 285 aa12.21□□□□□ -0.45
TNFRSF1A-214ENST00000543048 GMLQ99445 158 aa12.21□□□□□ -0.45
TNFRSF1A-214ENST00000543048 RIPOR2Q9Y4F9 1068 aa12.21□□□□□ -0.45
TNFRSF1A-214ENST00000543048 KIF16BQ96L93 1317 aa12.2□□□□□ -0.46
TNFRSF1A-214ENST00000543048 SNAP23O00161 211 aa12.2□□□□□ -0.46
TNFRSF1A-214ENST00000543048 BCAR3O75815 825 aa12.2□□□□□ -0.46
TNFRSF1A-214ENST00000543048 USP17L8P0C7I0 530 aa12.2□□□□□ -0.46
TNFRSF1A-214ENST00000543048 KLRK1P26718 216 aa12.2□□□□□ -0.46
TNFRSF1A-214ENST00000543048 MMP14P50281 582 aa12.2□□□□□ -0.46
TNFRSF1A-214ENST00000543048 ZNF280AP59817 542 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF1A-214ENST00000543048 CDC37L1Q7L3B6 337 aa12.2□□□□□ -0.46
TNFRSF1A-214ENST00000543048 PHF12Q96QT6 1004 aa12.2□□□□□ -0.46
TNFRSF1A-214ENST00000543048 PUS3Q9BZE2 481 aaKnown RBP12.2□□□□□ -0.46
TNFRSF1A-214ENST00000543048 CD209Q9NNX6 404 aa12.2□□□□□ -0.46
TNFRSF1A-214ENST00000543048 MROH5Q6ZUA9 1318 aa12.19□□□□□ -0.46
TNFRSF1A-214ENST00000543048 ZNF646O15015 1829 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF1A-214ENST00000543048 UBTFL1P0CB47 393 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF1A-214ENST00000543048 UBE4AQ14139 1066 aa12.19□□□□□ -0.46
TNFRSF1A-214ENST00000543048 DACT2Q5SW24 774 aa12.19□□□□□ -0.46
TNFRSF1A-214ENST00000543048 INTS3Q68E01 1043 aaKnown RBP12.19□□□□□ -0.46
TNFRSF1A-214ENST00000543048 USP48Q86UV5 1035 aa12.19□□□□□ -0.46
TNFRSF1A-214ENST00000543048 SPOCK2Q92563 424 aa12.19□□□□□ -0.46
TNFRSF1A-214ENST00000543048 FBXW7Q969H0 707 aa12.19□□□□□ -0.46
TNFRSF1A-214ENST00000543048 GLIS2Q9BZE0 524 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF1A-214ENST00000543048 MKRN1Q9UHC7 482 aaKnown RBP12.19□□□□□ -0.46
TNFRSF1A-214ENST00000543048 ZNF609O15014 1411 aa12.19□□□□□ -0.46
TNFRSF1A-214ENST00000543048 PCNTO95613 3336 aa12.19□□□□□ -0.46
TNFRSF1A-214ENST00000543048 ZBED9Q6R2W3 1325 aa12.18□□□□□ -0.46
TNFRSF1A-214ENST00000543048 MYO3BQ8WXR4 1341 aa12.18□□□□□ -0.46
TNFRSF1A-214ENST00000543048 IRS2Q9Y4H2 1338 aa12.18□□□□□ -0.46
TNFRSF1A-214ENST00000543048 TRAF5O00463 557 aa12.18□□□□□ -0.46
TNFRSF1A-214ENST00000543048 EGFRP00533 1210 aa12.18□□□□□ -0.46
TNFRSF1A-214ENST00000543048 IL1R1P14778 569 aa12.18□□□□□ -0.46
TNFRSF1A-214ENST00000543048 GTF2IP78347 998 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms