RNA–Protein interactions for RNA: ENST00000542896.5

PDCD2-209, Transcript of programmed cell death 2, human

TSL 2 BASIC

Gene PDCD2, Length 1,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD2-209	ENST00000542896	IL16	Q14005	1332 aa		33.22	■■■□□ 2.91
PDCD2-209	ENST00000542896	POLR2A	P24928	1970 aa	Known RBP	33.21	■■■□□ 2.91
PDCD2-209	ENST00000542896	FAM161A	Q3B820	660 aa		33.21	■■■□□ 2.91
PDCD2-209	ENST00000542896	PITPNM2	Q9BZ72	1349 aa		33.21	■■■□□ 2.91
PDCD2-209	ENST00000542896	FLII	Q13045	1269 aa		33.2	■■■□□ 2.91
PDCD2-209	ENST00000542896	GCKR	Q14397	625 aa		33.2	■■■□□ 2.91
PDCD2-209	ENST00000542896	COA1	Q9GZY4	146 aa		33.2	■■■□□ 2.91
PDCD2-209	ENST00000542896	SAGE1	Q9NXZ1	904 aa		33.2	■■■□□ 2.91
PDCD2-209	ENST00000542896	LEMD3	Q9Y2U8	911 aa		33.2	■■■□□ 2.91
PDCD2-209	ENST00000542896	MYH16	Q9H6N6	1097 aa		33.19	■■■□□ 2.9
PDCD2-209	ENST00000542896	ITGA6	P23229	1130 aa		33.18	■■■□□ 2.9
PDCD2-209	ENST00000542896	FKBP1B	P68106	108 aa		33.18	■■■□□ 2.9
PDCD2-209	ENST00000542896	FKBP5	Q13451	457 aa	Predicted RBP	33.18	■■■□□ 2.9
PDCD2-209	ENST00000542896	DACT2	Q5SW24	774 aa		33.18	■■■□□ 2.9
PDCD2-209	ENST00000542896	OGFOD1	Q8N543	542 aa		33.18	■■■□□ 2.9
PDCD2-209	ENST00000542896	MXD3	Q9BW11	206 aa		33.18	■■■□□ 2.9
PDCD2-209	ENST00000542896	PLA2G12B	Q9BX93	195 aa		33.18	■■■□□ 2.9
PDCD2-209	ENST00000542896	DNAAF4	Q8WXU2	420 aa		33.17	■■■□□ 2.9
PDCD2-209	ENST00000542896	MPHOSPH8	Q99549	860 aa		33.17	■■■□□ 2.9
PDCD2-209	ENST00000542896	RNF186	Q9NXI6	227 aa		33.17	■■■□□ 2.9
PDCD2-209	ENST00000542896	MYO3B	Q8WXR4	1341 aa		33.17	■■■□□ 2.9
PDCD2-209	ENST00000542896	TRPA1	O75762	1119 aa		33.16	■■■□□ 2.9
PDCD2-209	ENST00000542896	NCBP3	Q53F19	620 aa	Known RBP	33.16	■■■□□ 2.9
PDCD2-209	ENST00000542896	STRIP1	Q5VSL9	837 aa		33.16	■■■□□ 2.9
PDCD2-209	ENST00000542896	ANKRD2	Q9GZV1	360 aa		33.16	■■■□□ 2.9
PDCD2-209	ENST00000542896	SCAF8	Q9UPN6	1271 aa	Known RBP	33.16	■■■□□ 2.9
PDCD2-209	ENST00000542896	PSME4	Q14997	1843 aa		33.16	■■■□□ 2.9
PDCD2-209	ENST00000542896	NBPF9	Q3BBW0	867 aa		33.15	■■■□□ 2.9
PDCD2-209	ENST00000542896	TXNRD3	Q86VQ6	643 aa		33.15	■■■□□ 2.9
PDCD2-209	ENST00000542896	CSRNP1	Q96S65	589 aa		33.15	■■■□□ 2.9
PDCD2-209	ENST00000542896	FANCI	Q9NVI1	1328 aa		33.15	■■■□□ 2.9
PDCD2-209	ENST00000542896	CASP8AP2	Q9UKL3	1982 aa		33.14	■■■□□ 2.9
PDCD2-209	ENST00000542896	ZNF804B	A4D1E1	1349 aa		33.14	■■■□□ 2.9
PDCD2-209	ENST00000542896	RASAL3	Q86YV0	1011 aa		33.14	■■■□□ 2.9
PDCD2-209	ENST00000542896	LINS1	Q8NG48	757 aa		33.14	■■■□□ 2.9
PDCD2-209	ENST00000542896	MRS2	Q9HD23	443 aa		33.14	■■■□□ 2.9
PDCD2-209	ENST00000542896	CASP7	P55210	303 aa		33.13	■■■□□ 2.89
PDCD2-209	ENST00000542896	MLLT1	Q03111	559 aa	Predicted RBP	33.13	■■■□□ 2.89
PDCD2-209	ENST00000542896	CSF1R	P07333	972 aa		33.12	■■■□□ 2.89
PDCD2-209	ENST00000542896	REM2	Q8IYK8	340 aa	Predicted RBP	33.12	■■■□□ 2.89
PDCD2-209	ENST00000542896	SALL2	Q9Y467	1007 aa	Predicted RBP	33.12	■■■□□ 2.89
PDCD2-209	ENST00000542896	MYH3	P11055	1940 aa		33.12	■■■□□ 2.89
PDCD2-209	ENST00000542896	KCNJ4	P48050	445 aa		33.11	■■■□□ 2.89
PDCD2-209	ENST00000542896	RGS19	P49795	217 aa		33.11	■■■□□ 2.89
PDCD2-209	ENST00000542896	PRAMEF18	Q5VWM3	479 aa		33.11	■■■□□ 2.89
PDCD2-209	ENST00000542896	TTLL5	Q6EMB2	1281 aa		33.11	■■■□□ 2.89
PDCD2-209	ENST00000542896	SPEF2	Q9C093	1822 aa		33.1	■■■□□ 2.89
PDCD2-209	ENST00000542896	WNT10B	O00744	389 aa		33.1	■■■□□ 2.89
PDCD2-209	ENST00000542896	KLRK1	P26718	216 aa		33.1	■■■□□ 2.89
PDCD2-209	ENST00000542896	MOB2	Q70IA6	237 aa		33.1	■■■□□ 2.89
PDCD2-209	ENST00000542896	PAPPA2	Q9BXP8	1791 aa		33.09	■■■□□ 2.89
PDCD2-209	ENST00000542896	VAMP4	O75379	141 aa		33.09	■■■□□ 2.89
PDCD2-209	ENST00000542896	TTLL12	Q14166	644 aa	Predicted RBP	33.09	■■■□□ 2.89
PDCD2-209	ENST00000542896	WDR63	Q8IWG1	891 aa		33.09	■■■□□ 2.89
PDCD2-209	ENST00000542896	ANKRD18B	A2A2Z9	1011 aa		33.08	■■■□□ 2.89
PDCD2-209	ENST00000542896	MMP14	P50281	582 aa		33.08	■■■□□ 2.89
PDCD2-209	ENST00000542896	CHRND	Q07001	517 aa		33.08	■■■□□ 2.89
PDCD2-209	ENST00000542896	HDAC9	Q9UKV0	1011 aa		33.08	■■■□□ 2.89
PDCD2-209	ENST00000542896	UBE2Q2L	H0YL09	131 aa		33.07	■■■□□ 2.88
PDCD2-209	ENST00000542896	SASH1	O94885	1247 aa		33.07	■■■□□ 2.88
PDCD2-209	ENST00000542896	NF2	P35240	595 aa		33.07	■■■□□ 2.88
PDCD2-209	ENST00000542896	EXOSC9	Q06265	439 aa	Known RBP	33.07	■■■□□ 2.88
PDCD2-209	ENST00000542896	GTF2I	P78347	998 aa		33.06	■■■□□ 2.88
PDCD2-209	ENST00000542896	KIAA0825	Q8IV33	1275 aa		33.06	■■■□□ 2.88
PDCD2-209	ENST00000542896	ANP32C	O43423	234 aa		33.04	■■■□□ 2.88
PDCD2-209	ENST00000542896	CHMP3	Q9Y3E7	222 aa		33.04	■■■□□ 2.88
PDCD2-209	ENST00000542896	IFIT5	Q13325	482 aa	Known RBP	33.03	■■■□□ 2.88
PDCD2-209	ENST00000542896	CD209	Q9NNX6	404 aa		33.03	■■■□□ 2.88
PDCD2-209	ENST00000542896		F6X3S4	739 aa		33.01	■■■□□ 2.87
PDCD2-209	ENST00000542896	APOBEC3F	Q8IUX4	373 aa	Known RBP	33.01	■■■□□ 2.87
PDCD2-209	ENST00000542896	TAF5L	O75529	589 aa		33	■■■□□ 2.87
PDCD2-209	ENST00000542896	FOXO4	P98177	505 aa		33	■■■□□ 2.87
PDCD2-209	ENST00000542896	BEND3	Q5T5X7	828 aa		33	■■■□□ 2.87
PDCD2-209	ENST00000542896	HELB	Q8NG08	1087 aa	Predicted RBP	33	■■■□□ 2.87
PDCD2-209	ENST00000542896	SNAP23	O00161	211 aa		32.99	■■■□□ 2.87
PDCD2-209	ENST00000542896	ARMC9	Q7Z3E5	817 aa		32.98	■■■□□ 2.87
PDCD2-209	ENST00000542896	CTU1	Q7Z7A3	348 aa	Known RBP	32.98	■■■□□ 2.87
PDCD2-209	ENST00000542896	ZNF646	O15015	1829 aa	Predicted RBP	32.98	■■■□□ 2.87
PDCD2-209	ENST00000542896	AKAP11	Q9UKA4	1901 aa		32.97	■■■□□ 2.87
PDCD2-209	ENST00000542896	PRKG1	Q13976	671 aa		32.97	■■■□□ 2.87
PDCD2-209	ENST00000542896	C15orf52	Q6ZUT6	534 aa	Known RBP	32.97	■■■□□ 2.87
PDCD2-209	ENST00000542896	ZBED3	Q96IU2	234 aa	Predicted RBP	32.97	■■■□□ 2.87
PDCD2-209	ENST00000542896	DLGAP5	Q15398	846 aa		32.96	■■■□□ 2.87
PDCD2-209	ENST00000542896	LMBR1L	Q6UX01	489 aa		32.96	■■■□□ 2.87
PDCD2-209	ENST00000542896	ZNF804A	Q7Z570	1209 aa		32.96	■■■□□ 2.87
PDCD2-209	ENST00000542896	MKRN3	Q13064	507 aa	Known RBP	32.95	■■■□□ 2.87
PDCD2-209	ENST00000542896	TAF7L	Q5H9L4	462 aa		32.95	■■■□□ 2.87
PDCD2-209	ENST00000542896	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.95	■■■□□ 2.87
PDCD2-209	ENST00000542896	IRS2	Q9Y4H2	1338 aa		32.95	■■■□□ 2.86
PDCD2-209	ENST00000542896	CCDC57	Q2TAC2	916 aa		32.94	■■■□□ 2.86
PDCD2-209	ENST00000542896	TBC1D8	O95759	1140 aa		32.93	■■■□□ 2.86
PDCD2-209	ENST00000542896	PTPN12	Q05209	780 aa	Known RBP	32.93	■■■□□ 2.86
PDCD2-209	ENST00000542896	CERS5	Q8N5B7	392 aa		32.93	■■■□□ 2.86
PDCD2-209	ENST00000542896		F8W031	263 aa	Predicted RBP	32.92	■■■□□ 2.86
PDCD2-209	ENST00000542896	GRM8	O00222	908 aa		32.92	■■■□□ 2.86
PDCD2-209	ENST00000542896	TM4SF4	P48230	202 aa		32.92	■■■□□ 2.86
PDCD2-209	ENST00000542896	EPHA10	Q5JZY3	1008 aa		32.92	■■■□□ 2.86
PDCD2-209	ENST00000542896	ZNF594	Q96JF6	807 aa	Predicted RBP	32.92	■■■□□ 2.86
PDCD2-209	ENST00000542896	PLIN1	O60240	522 aa		32.91	■■■□□ 2.86
PDCD2-209	ENST00000542896	IL1R1	P14778	569 aa		32.91	■■■□□ 2.86

Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms