RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 RESTQ13127 1097 aa7.74□□□□□ -1.17
PTPRO-208ENST00000542557 CCDC158Q5M9N0 1113 aa7.74□□□□□ -1.17
PTPRO-208ENST00000542557 GIGYF2Q6Y7W6 1299 aaKnown RBP7.74□□□□□ -1.17
PTPRO-208ENST00000542557 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.74□□□□□ -1.17
PTPRO-208ENST00000542557 DNAJC10Q8IXB1 793 aa7.74□□□□□ -1.17
PTPRO-208ENST00000542557 PIGBQ92521 554 aa7.74□□□□□ -1.17
PTPRO-208ENST00000542557 PUS3Q9BZE2 481 aaKnown RBP7.74□□□□□ -1.17
PTPRO-208ENST00000542557 ZSCAN16Q9H4T2 348 aaPredicted RBP7.74□□□□□ -1.17
PTPRO-208ENST00000542557 STK3Q13188 491 aa7.73□□□□□ -1.17
PTPRO-208ENST00000542557 FERMT3Q86UX7 667 aa7.73□□□□□ -1.17
PTPRO-208ENST00000542557 BRF1Q92994 677 aa7.73□□□□□ -1.17
PTPRO-208ENST00000542557 KIF3AQ9Y496 699 aa7.73□□□□□ -1.17
PTPRO-208ENST00000542557 NWD2Q9ULI1 1742 aa7.73□□□□□ -1.17
PTPRO-208ENST00000542557 ARAP2Q8WZ64 1704 aa7.73□□□□□ -1.17
PTPRO-208ENST00000542557 JAK2O60674 1132 aa7.73□□□□□ -1.17
PTPRO-208ENST00000542557 HCLS1P14317 486 aaPredicted RBP7.73□□□□□ -1.17
PTPRO-208ENST00000542557 TERF1P54274 439 aa7.73□□□□□ -1.17
PTPRO-208ENST00000542557 SCRN1Q12765 414 aa7.73□□□□□ -1.17
PTPRO-208ENST00000542557 TTC39AQ5SRH9 613 aa7.73□□□□□ -1.17
PTPRO-208ENST00000542557 NAA16Q6N069 864 aaPredicted RBP7.73□□□□□ -1.17
PTPRO-208ENST00000542557 LEO1Q8WVC0 666 aaPredicted RBP7.73□□□□□ -1.17
PTPRO-208ENST00000542557 XAGE2Q96GT9 111 aa7.73□□□□□ -1.17
PTPRO-208ENST00000542557 DDX19AQ9NUU7 478 aaKnown RBP7.73□□□□□ -1.17
PTPRO-208ENST00000542557 ASAP1Q9ULH1 1129 aa7.73□□□□□ -1.17
PTPRO-208ENST00000542557 ATRNO75882 1429 aa7.73□□□□□ -1.17
PTPRO-208ENST00000542557 COL16A1Q07092 1604 aaPredicted RBP7.73□□□□□ -1.17
PTPRO-208ENST00000542557 E7EWF7 191 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 CCDC192P0DO97 292 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 EVCP57679 992 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 IFIT5Q13325 482 aaKnown RBP7.72□□□□□ -1.17
PTPRO-208ENST00000542557 RBM43Q6ZSC3 357 aaKnown RBP7.72□□□□□ -1.17
PTPRO-208ENST00000542557 NSUN7Q8NE18 718 aaKnown RBP7.72□□□□□ -1.17
PTPRO-208ENST00000542557 ZNF274Q96GC6 653 aaPredicted RBP7.72□□□□□ -1.17
PTPRO-208ENST00000542557 ZNF512BQ96KM6 892 aaPredicted RBP7.72□□□□□ -1.17
PTPRO-208ENST00000542557 SPATA32Q96LK8 384 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 NUP62CLQ9H1M0 184 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 CTNNA3Q9UI47 895 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 AHDC1Q5TGY3 1603 aaPredicted RBP7.72□□□□□ -1.17
PTPRO-208ENST00000542557 CICQ96RK0 1608 aaPredicted RBP7.72□□□□□ -1.17
PTPRO-208ENST00000542557 SALL1Q9NSC2 1324 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 M0R2C6 588 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 FGD1P98174 961 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 GIMAP6Q6P9H5 292 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 H3BQV1 296 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 DTNBO60941 627 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 TPM2P07951 284 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 MAP3K11Q16584 847 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 IFFO2Q5TF58 517 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 ATL3Q6DD88 541 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 NLRP10Q86W26 655 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 APPBP2Q92624 585 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 OSBP2Q969R2 916 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 BTG4Q9NY30 223 aa7.72□□□□□ -1.17
PTPRO-208ENST00000542557 AKAP11Q9UKA4 1901 aa7.71□□□□□ -1.17
PTPRO-208ENST00000542557 NUP98P52948 1817 aa7.71□□□□□ -1.17
PTPRO-208ENST00000542557 WDR19Q8NEZ3 1342 aa7.71□□□□□ -1.17
PTPRO-208ENST00000542557 RREB1Q92766 1687 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 KDM4AO75164 1064 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 CYP19A1P11511 503 aaPredicted RBP7.71□□□□□ -1.18
PTPRO-208ENST00000542557 LIG1P18858 919 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 ADORA1P30542 326 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 CTSWP56202 376 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 GORABQ5T7V8 394 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 FAM173BQ6P4H8 233 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 FAM89AQ96GI7 184 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 USP25Q9UHP3 1055 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 CFAP45Q9UL16 551 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 RIPOR2Q9Y4F9 1068 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 DOT1LQ8TEK3 1739 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 PTPDC1A2A3K4 754 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 GOLGA6L4A6NEF3 574 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 ERVV-1B6SEH8 477 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 CTDNEP1O95476 244 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 PTMAP06454 111 aaKnown RBP7.71□□□□□ -1.18
PTPRO-208ENST00000542557 ATP2B3Q16720 1220 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 SLFNL1Q499Z3 407 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 TTLL11Q8NHH1 800 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 FAM200AQ8TCP9 573 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 LRRC2Q9BYS8 371 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 CLSTN2Q9H4D0 955 aa7.71□□□□□ -1.18
PTPRO-208ENST00000542557 ANKRD18BA2A2Z9 1011 aa7.7□□□□□ -1.18
PTPRO-208ENST00000542557 FOXP2O15409 715 aa7.7□□□□□ -1.18
PTPRO-208ENST00000542557 ADCY5O95622 1261 aa7.7□□□□□ -1.18
PTPRO-208ENST00000542557 FKBP4Q02790 459 aaKnown RBP eCLIP7.7□□□□□ -1.18
PTPRO-208ENST00000542557 APOBRQ0VD83 1088 aa7.7□□□□□ -1.18
PTPRO-208ENST00000542557 IMMTQ16891 758 aaKnown RBP7.7□□□□□ -1.18
PTPRO-208ENST00000542557 VGLL2Q8N8G2 317 aa7.7□□□□□ -1.18
PTPRO-208ENST00000542557 RGS22Q8NE09 1264 aa7.7□□□□□ -1.18
PTPRO-208ENST00000542557 ZNF330Q9Y3S2 320 aaPredicted RBP7.7□□□□□ -1.18
PTPRO-208ENST00000542557 ITGA6P23229 1130 aa7.7□□□□□ -1.18
PTPRO-208ENST00000542557 PDIA3P30101 505 aaKnown RBP7.7□□□□□ -1.18
PTPRO-208ENST00000542557 IL6STP40189 918 aaPredicted RBP7.7□□□□□ -1.18
PTPRO-208ENST00000542557 METTL24Q5JXM2 366 aa7.7□□□□□ -1.18
PTPRO-208ENST00000542557 ZSCAN25Q6NSZ9 544 aa7.7□□□□□ -1.18
PTPRO-208ENST00000542557 AK7Q96M32 723 aa7.7□□□□□ -1.18
PTPRO-208ENST00000542557 SLC4A9Q96Q91 983 aa7.7□□□□□ -1.18
PTPRO-208ENST00000542557 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.7□□□□□ -1.18
PTPRO-208ENST00000542557 TNMDQ9H2S6 317 aa7.7□□□□□ -1.18
PTPRO-208ENST00000542557 DACT1Q9NYF0 836 aa7.7□□□□□ -1.18
PTPRO-208ENST00000542557 BCCIPQ9P287 314 aaKnown RBP eCLIP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms