RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 ZBTB38Q8NAP3 1195 aaPredicted RBP14.76□□□□□ -0.05
RNF4-222ENST00000541204 SPATA32Q96LK8 384 aa14.76□□□□□ -0.05
RNF4-222ENST00000541204 TRMT112Q9UI30 125 aaKnown RBP14.76□□□□□ -0.05
RNF4-222ENST00000541204 GOLGA6L4A6NEF3 574 aa14.76□□□□□ -0.05
RNF4-222ENST00000541204 PCCAP05165 728 aaPredicted RBP14.76□□□□□ -0.05
RNF4-222ENST00000541204 TNMDQ9H2S6 317 aa14.76□□□□□ -0.05
RNF4-222ENST00000541204 GREM2Q9H772 168 aa14.76□□□□□ -0.05
RNF4-222ENST00000541204 NHSL1Q5SYE7 1610 aa14.76□□□□□ -0.05
RNF4-222ENST00000541204 TTC39AQ5SRH9 613 aa14.75□□□□□ -0.05
RNF4-222ENST00000541204 NLRP10Q86W26 655 aa14.75□□□□□ -0.05
RNF4-222ENST00000541204 ZNF710Q8N1W2 664 aa14.75□□□□□ -0.05
RNF4-222ENST00000541204 XAGE2Q96GT9 111 aa14.75□□□□□ -0.05
RNF4-222ENST00000541204 NUP188Q5SRE5 1749 aa14.75□□□□□ -0.05
RNF4-222ENST00000541204 PDIA4P13667 645 aaKnown RBP14.75□□□□□ -0.05
RNF4-222ENST00000541204 GTF2F1P35269 517 aaKnown RBP eCLIP14.75□□□□□ -0.059e-9■■■■■ 35.7
RNF4-222ENST00000541204 FGD1P98174 961 aa14.75□□□□□ -0.05
RNF4-222ENST00000541204 SCARF1Q14162 830 aa14.75□□□□□ -0.05
RNF4-222ENST00000541204 NEK1Q96PY6 1258 aa14.75□□□□□ -0.05
RNF4-222ENST00000541204 SCAND2PQ9GZW5 306 aaPredicted RBP14.75□□□□□ -0.05
RNF4-222ENST00000541204 BCL9O00512 1426 aa14.75□□□□□ -0.05
RNF4-222ENST00000541204 TJP1Q07157 1748 aa14.75□□□□□ -0.05
RNF4-222ENST00000541204 PAPPAQ13219 1627 aa14.74□□□□□ -0.05
RNF4-222ENST00000541204 GOLGA6L6A8MZA4 724 aa14.74□□□□□ -0.05
RNF4-222ENST00000541204 JAK2O60674 1132 aa14.74□□□□□ -0.05
RNF4-222ENST00000541204 HSP90B1P14625 803 aaKnown RBP14.74□□□□□ -0.05
RNF4-222ENST00000541204 ITGA6P23229 1130 aa14.74□□□□□ -0.05
RNF4-222ENST00000541204 PIP4K2BP78356 416 aa14.74□□□□□ -0.05
RNF4-222ENST00000541204 ANO6Q4KMQ2 910 aa14.74□□□□□ -0.05
RNF4-222ENST00000541204 LDHAL6AQ6ZMR3 332 aa14.74□□□□□ -0.05
RNF4-222ENST00000541204 DZIP3Q86Y13 1208 aaKnown RBP14.74□□□□□ -0.05
RNF4-222ENST00000541204 LEO1Q8WVC0 666 aaPredicted RBP14.74□□□□□ -0.05
RNF4-222ENST00000541204 PPFIA3O75145 1194 aa14.74□□□□□ -0.05
RNF4-222ENST00000541204 CIAO1O76071 339 aa14.74□□□□□ -0.05
RNF4-222ENST00000541204 METTL24Q5JXM2 366 aa14.74□□□□□ -0.05
RNF4-222ENST00000541204 ALDH8A1Q9H2A2 487 aaPredicted RBP14.74□□□□□ -0.05
RNF4-222ENST00000541204 HMG20BQ9P0W2 317 aa14.74□□□□□ -0.05
RNF4-222ENST00000541204 IRS4O14654 1257 aaPredicted RBP14.73□□□□□ -0.05
RNF4-222ENST00000541204 TPM3P06753 285 aa14.73□□□□□ -0.05
RNF4-222ENST00000541204 PTGS1P23219 599 aa14.73□□□□□ -0.05
RNF4-222ENST00000541204 WASHC4Q2M389 1173 aa14.73□□□□□ -0.05
RNF4-222ENST00000541204 CCDC158Q5M9N0 1113 aa14.73□□□□□ -0.05
RNF4-222ENST00000541204 Q6ZUG5 572 aa14.73□□□□□ -0.05
RNF4-222ENST00000541204 CBX8Q9HC52 389 aa14.73□□□□□ -0.05
RNF4-222ENST00000541204 KIF3AQ9Y496 699 aa14.73□□□□□ -0.05
RNF4-222ENST00000541204 U3KPZ7 1027 aaPredicted RBP14.73□□□□□ -0.05
RNF4-222ENST00000541204 NR1I2O75469 434 aa14.73□□□□□ -0.05
RNF4-222ENST00000541204 USPL1Q5W0Q7 1092 aa14.73□□□□□ -0.05
RNF4-222ENST00000541204 STOX1Q6ZVD7 989 aa14.73□□□□□ -0.05
RNF4-222ENST00000541204 CHST3Q7LGC8 479 aa14.73□□□□□ -0.05
RNF4-222ENST00000541204 DDX11Q96FC9 970 aa14.73□□□□□ -0.05
RNF4-222ENST00000541204 GPR108Q9NPR9 543 aa14.73□□□□□ -0.05
RNF4-222ENST00000541204 CNNM1Q9NRU3 951 aa14.73□□□□□ -0.05
RNF4-222ENST00000541204 NAP1L2Q9ULW6 460 aaPredicted RBP14.73□□□□□ -0.05
RNF4-222ENST00000541204 TRIM28Q13263 835 aaKnown RBP14.73□□□□□ -0.05
RNF4-222ENST00000541204 DDB1Q16531 1140 aa14.73□□□□□ -0.05
RNF4-222ENST00000541204 TSGA10IPQ3SY00 556 aa14.73□□□□□ -0.05
RNF4-222ENST00000541204 TTLL5Q6EMB2 1281 aa14.73□□□□□ -0.05
RNF4-222ENST00000541204 TTLL11Q8NHH1 800 aa14.73□□□□□ -0.05
RNF4-222ENST00000541204 JCADQ9P266 1359 aa14.72□□□□□ -0.05
RNF4-222ENST00000541204 M0R2C6 588 aa14.72□□□□□ -0.05
RNF4-222ENST00000541204 HELBQ8NG08 1087 aaPredicted RBP14.72□□□□□ -0.05
RNF4-222ENST00000541204 BRF1Q92994 677 aa14.72□□□□□ -0.05
RNF4-222ENST00000541204 PGBD1Q96JS3 809 aa14.72□□□□□ -0.05
RNF4-222ENST00000541204 MAST3O60307 1309 aa14.72□□□□□ -0.05
RNF4-222ENST00000541204 DISP2A7MBM2 1401 aa14.72□□□□□ -0.05
RNF4-222ENST00000541204 RNF113AO15541 343 aaKnown RBP14.72□□□□□ -0.05
RNF4-222ENST00000541204 ZAP70P43403 619 aa14.72□□□□□ -0.05
RNF4-222ENST00000541204 FOSBP53539 338 aa14.72□□□□□ -0.05
RNF4-222ENST00000541204 BICD2Q8TD16 824 aa14.72□□□□□ -0.05
RNF4-222ENST00000541204 GTF3C6Q969F1 213 aa14.72□□□□□ -0.05
RNF4-222ENST00000541204 CSF1RP07333 972 aa14.71□□□□□ -0.05
RNF4-222ENST00000541204 ZMYM1Q5SVZ6 1142 aa14.71□□□□□ -0.05
RNF4-222ENST00000541204 OSBP2Q969R2 916 aa14.71□□□□□ -0.05
RNF4-222ENST00000541204 CCDC94Q9BW85 323 aaPredicted RBP14.71□□□□□ -0.05
RNF4-222ENST00000541204 CLSTN2Q9H4D0 955 aa14.71□□□□□ -0.05
RNF4-222ENST00000541204 DDX19AQ9NUU7 478 aaKnown RBP14.71□□□□□ -0.05
RNF4-222ENST00000541204 AKAP2Q9Y2D5 859 aa14.71□□□□□ -0.05
RNF4-222ENST00000541204 SH3TC1Q8TE82 1336 aa14.71□□□□□ -0.05
RNF4-222ENST00000541204 HSPD1P10809 573 aaKnown RBP14.71□□□□□ -0.06
RNF4-222ENST00000541204 ATP6V1AP38606 617 aa14.71□□□□□ -0.06
RNF4-222ENST00000541204 CTSWP56202 376 aa14.71□□□□□ -0.06
RNF4-222ENST00000541204 KRT32Q14532 448 aa14.71□□□□□ -0.06
RNF4-222ENST00000541204 ATP2B3Q16720 1220 aa14.71□□□□□ -0.06
RNF4-222ENST00000541204 CCDC186Q7Z3E2 898 aa14.71□□□□□ -0.06
RNF4-222ENST00000541204 DRC7Q8IY82 874 aa14.71□□□□□ -0.06
RNF4-222ENST00000541204 NRBP1Q9UHY1 535 aa14.71□□□□□ -0.06
RNF4-222ENST00000541204 ROBO1Q9Y6N7 1651 aa14.71□□□□□ -0.06
RNF4-222ENST00000541204 HAND2P61296 217 aa14.7□□□□□ -0.06
RNF4-222ENST00000541204 BCL2L12Q9HB09 334 aa14.7□□□□□ -0.06
RNF4-222ENST00000541204 HELLSQ9NRZ9 838 aa14.7□□□□□ -0.06
RNF4-222ENST00000541204 UBN2Q6ZU65 1347 aa14.7□□□□□ -0.06
RNF4-222ENST00000541204 PALLDQ8WX93 1383 aa14.7□□□□□ -0.06
RNF4-222ENST00000541204 ANKRD18BA2A2Z9 1011 aa14.7□□□□□ -0.06
RNF4-222ENST00000541204 SNAP23O00161 211 aa14.7□□□□□ -0.06
RNF4-222ENST00000541204 RIOK3O14730 519 aaKnown RBP14.7□□□□□ -0.06
RNF4-222ENST00000541204 LRMPQ12912 555 aa14.7□□□□□ -0.06
RNF4-222ENST00000541204 RBM43Q6ZSC3 357 aaKnown RBP14.7□□□□□ -0.06
RNF4-222ENST00000541204 TRIM5Q9C035 493 aa14.7□□□□□ -0.06
RNF4-222ENST00000541204 DNAJC25Q9H1X3 360 aa14.7□□□□□ -0.06
RNF4-222ENST00000541204 H3BQV1 296 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms