RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 BLMP54132 1417 aaPredicted RBP16.98■□□□□ 0.31
SMARCA4-207ENST00000541122 ZEB2O60315 1214 aa16.98■□□□□ 0.31
SMARCA4-207ENST00000541122 UQCRFS1P1P0C7P4 283 aa16.98■□□□□ 0.31
SMARCA4-207ENST00000541122 TCEANC2Q96MN5 208 aa16.98■□□□□ 0.31
SMARCA4-207ENST00000541122 CBX8Q9HC52 389 aa16.98■□□□□ 0.31
SMARCA4-207ENST00000541122 PTPDC1A2A3K4 754 aa16.98■□□□□ 0.31
SMARCA4-207ENST00000541122 MARCKSP29966 332 aaPredicted RBP16.98■□□□□ 0.31
SMARCA4-207ENST00000541122 TCERG1LQ5VWI1 586 aa16.98■□□□□ 0.31
SMARCA4-207ENST00000541122 CCDC85AQ96PX6 553 aaPredicted RBP16.98■□□□□ 0.31
SMARCA4-207ENST00000541122 TRIM75PA6NK02 468 aa16.97■□□□□ 0.31
SMARCA4-207ENST00000541122 SCLT1Q96NL6 688 aa16.97■□□□□ 0.31
SMARCA4-207ENST00000541122 DNAI2Q9GZS0 605 aa16.97■□□□□ 0.31
SMARCA4-207ENST00000541122 LUC7L2Q9Y383 392 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-207ENST00000541122 TTC21AQ8NDW8 1320 aa16.97■□□□□ 0.31
SMARCA4-207ENST00000541122 RTN1Q16799 776 aa16.97■□□□□ 0.31
SMARCA4-207ENST00000541122 C8orf58Q8NAV2 365 aa16.97■□□□□ 0.31
SMARCA4-207ENST00000541122 ZBTB7BO15156 539 aaPredicted RBP16.97■□□□□ 0.31
SMARCA4-207ENST00000541122 LACTBP83111 547 aaPredicted RBP16.97■□□□□ 0.31
SMARCA4-207ENST00000541122 DHX32Q7L7V1 743 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-207ENST00000541122 CCDC144CPQ8IYA2 1237 aa16.97■□□□□ 0.31
SMARCA4-207ENST00000541122 LLPHQ9BRT6 129 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-207ENST00000541122 TCOF1Q13428 1488 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-207ENST00000541122 ARHGAP6O43182 974 aa16.96■□□□□ 0.31
SMARCA4-207ENST00000541122 CTNNA2P26232 953 aa16.96■□□□□ 0.31
SMARCA4-207ENST00000541122 TBC1D5Q92609 795 aa16.96■□□□□ 0.31
SMARCA4-207ENST00000541122 ZFYVE9O95405 1425 aa16.96■□□□□ 0.31
SMARCA4-207ENST00000541122 WAPLQ7Z5K2 1190 aa16.96■□□□□ 0.31
SMARCA4-207ENST00000541122 DRC1Q96MC2 740 aa16.96■□□□□ 0.31
SMARCA4-207ENST00000541122 CARD6Q9BX69 1037 aa16.96■□□□□ 0.31
SMARCA4-207ENST00000541122 COL17A1Q9UMD9 1497 aaPredicted RBP16.96■□□□□ 0.31
SMARCA4-207ENST00000541122 MACROD2A1Z1Q3 448 aa16.96■□□□□ 0.31
SMARCA4-207ENST00000541122 HSP90AA4PQ58FG1 418 aa16.96■□□□□ 0.31
SMARCA4-207ENST00000541122 CWC25Q9NXE8 425 aaPredicted RBP16.96■□□□□ 0.31
SMARCA4-207ENST00000541122 PROSER2Q86WR7 435 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-207ENST00000541122 CAPZA3Q96KX2 299 aa16.95■□□□□ 0.3
SMARCA4-207ENST00000541122 IKBKGQ9Y6K9 419 aa16.95■□□□□ 0.3
SMARCA4-207ENST00000541122 URB2Q14146 1524 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-207ENST00000541122 PDE4BQ07343 736 aa16.95■□□□□ 0.3
SMARCA4-207ENST00000541122 DDX46Q7L014 1031 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-207ENST00000541122 IFT74Q96LB3 600 aa16.95■□□□□ 0.3
SMARCA4-207ENST00000541122 HOMER2Q9NSB8 354 aa16.95■□□□□ 0.3
SMARCA4-207ENST00000541122 NDUFAB1O14561 156 aa16.95■□□□□ 0.3
SMARCA4-207ENST00000541122 WDHD1O75717 1129 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-207ENST00000541122 TESK2Q96S53 571 aa16.95■□□□□ 0.3
SMARCA4-207ENST00000541122 LRRC2Q9BYS8 371 aa16.95■□□□□ 0.3
SMARCA4-207ENST00000541122 BRD1O95696 1058 aa16.95■□□□□ 0.3
SMARCA4-207ENST00000541122 OAS2P29728 719 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-207ENST00000541122 PPP1R2P41236 205 aa16.95■□□□□ 0.3
SMARCA4-207ENST00000541122 DMTNQ08495 405 aa16.95■□□□□ 0.3
SMARCA4-207ENST00000541122 CEP83Q9Y592 693 aa16.95■□□□□ 0.3
SMARCA4-207ENST00000541122 PER1O15534 1290 aaPredicted RBP16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 PRC1O43663 620 aa16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 UBXN1Q04323 297 aa16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 EHMT1Q9H9B1 1298 aa16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 CPSF2Q9P2I0 782 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 KAT14Q9H8E8 782 aa16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 BRD3Q15059 726 aa16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 DHX58Q96C10 678 aa16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 SWAP70Q9UH65 585 aa16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 UHRF1BP1Q6BDS2 1440 aa16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 GOLGA6CA6NDK9 693 aa16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 GOLGA6DP0CG33 693 aa16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 NAA25Q14CX7 972 aa16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 PAF1Q8N7H5 531 aa16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 KRI1Q8N9T8 703 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 SELENOSQ9BQE4 189 aa16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 GOLGA6AQ9NYA3 693 aa16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 TMEM63CQ9P1W3 806 aa16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 MTRF1LQ9UGC7 380 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 ZNF652Q9Y2D9 606 aa16.94■□□□□ 0.3
SMARCA4-207ENST00000541122 CCDC122Q5T0U0 273 aa16.93■□□□□ 0.3
SMARCA4-207ENST00000541122 CYB5RLQ6IPT4 315 aa16.93■□□□□ 0.3
SMARCA4-207ENST00000541122 GPR161Q8N6U8 529 aaKnown RBP16.93■□□□□ 0.3
SMARCA4-207ENST00000541122 CUL5Q93034 780 aa16.93■□□□□ 0.3
SMARCA4-207ENST00000541122 SETDB1Q15047 1291 aa16.93■□□□□ 0.3
SMARCA4-207ENST00000541122 ITSN2Q9NZM3 1697 aa16.93■□□□□ 0.3
SMARCA4-207ENST00000541122 DZIP1Q86YF9 867 aaKnown RBP16.93■□□□□ 0.3
SMARCA4-207ENST00000541122 FANCCQ00597 558 aa16.93■□□□□ 0.3
SMARCA4-207ENST00000541122 NEBLO76041 1014 aa16.92■□□□□ 0.3
SMARCA4-207ENST00000541122 GNAQP50148 359 aa16.92■□□□□ 0.3
SMARCA4-207ENST00000541122 RAB11FIP4Q86YS3 637 aa16.92■□□□□ 0.3
SMARCA4-207ENST00000541122 ESR2Q92731 530 aa16.92■□□□□ 0.3
SMARCA4-207ENST00000541122 CYP26C1Q6V0L0 522 aa16.92■□□□□ 0.3
SMARCA4-207ENST00000541122 MPRIPQ6WCQ1 1025 aa16.92■□□□□ 0.3
SMARCA4-207ENST00000541122 UBE3BQ7Z3V4 1068 aa16.92■□□□□ 0.3
SMARCA4-207ENST00000541122 MAP3K9P80192 1104 aa16.92■□□□□ 0.3
SMARCA4-207ENST00000541122 ZSCAN26Q16670 478 aa16.92■□□□□ 0.3
SMARCA4-207ENST00000541122 KLHL34Q8N239 644 aa16.92■□□□□ 0.3
SMARCA4-207ENST00000541122 C17orf53Q8N3J3 647 aaPredicted RBP16.92■□□□□ 0.3
SMARCA4-207ENST00000541122 IBTKQ9P2D0 1353 aaPredicted RBP16.92■□□□□ 0.3
SMARCA4-207ENST00000541122 GRM8O00222 908 aa16.92■□□□□ 0.3
SMARCA4-207ENST00000541122 CROCCP2Q86T23 111 aa16.92■□□□□ 0.3
SMARCA4-207ENST00000541122 SMC6Q96SB8 1091 aa16.92■□□□□ 0.3
SMARCA4-207ENST00000541122 PLB1Q6P1J6 1458 aa16.92■□□□□ 0.3
SMARCA4-207ENST00000541122 CALM1P0DP23 149 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 CALM2P0DP24 149 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 CALM3P0DP25 149 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 RPS6KB1P23443 525 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 PPFIA1Q13136 1202 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 FMNL3Q8IVF7 1028 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms