RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 ZNF157P51786 506 aaPredicted RBP20.8■□□□□ 0.92
TRIM65-203ENST00000540812 CASP7P55210 303 aa20.8■□□□□ 0.92
TRIM65-203ENST00000540812 GCKRQ14397 625 aa20.8■□□□□ 0.92
TRIM65-203ENST00000540812 SCAF8Q9UPN6 1271 aaKnown RBP20.8■□□□□ 0.92
TRIM65-203ENST00000540812 CCDC85CA6NKD9 419 aa20.79■□□□□ 0.92
TRIM65-203ENST00000540812 KIF23Q02241 960 aaPredicted RBP20.79■□□□□ 0.92
TRIM65-203ENST00000540812 FAM161AQ3B820 660 aa20.79■□□□□ 0.92
TRIM65-203ENST00000540812 TXNRD3Q86VQ6 643 aa20.79■□□□□ 0.92
TRIM65-203ENST00000540812 PLA2G12BQ9BX93 195 aa20.79■□□□□ 0.92
TRIM65-203ENST00000540812 MRS2Q9HD23 443 aa20.79■□□□□ 0.92
TRIM65-203ENST00000540812 SALL2Q9Y467 1007 aaPredicted RBP20.79■□□□□ 0.92
TRIM65-203ENST00000540812 ITGA6P23229 1130 aa20.78■□□□□ 0.92
TRIM65-203ENST00000540812 IGHMBP2P38935 993 aaKnown RBP20.78■□□□□ 0.92
TRIM65-203ENST00000540812 FKBP5Q13451 457 aaPredicted RBP20.78■□□□□ 0.92
TRIM65-203ENST00000540812 DACT2Q5SW24 774 aa20.78■□□□□ 0.92
TRIM65-203ENST00000540812 DNAAF4Q8WXU2 420 aa20.78■□□□□ 0.92
TRIM65-203ENST00000540812 CCDC102AQ96A19 550 aa20.78■□□□□ 0.92
TRIM65-203ENST00000540812 MCOLN1Q9GZU1 580 aa20.78■□□□□ 0.92
TRIM65-203ENST00000540812 KLRK1P26718 216 aa20.77■□□□□ 0.92
TRIM65-203ENST00000540812 NCBP3Q53F19 620 aaKnown RBP20.77■□□□□ 0.92
TRIM65-203ENST00000540812 FBXW7Q969H0 707 aa20.77■□□□□ 0.92
TRIM65-203ENST00000540812 VAMP4O75379 141 aa20.76■□□□□ 0.91
TRIM65-203ENST00000540812 SLC10A3P09131 477 aa20.76■□□□□ 0.91
TRIM65-203ENST00000540812 NBPF9Q3BBW0 867 aa20.76■□□□□ 0.91
TRIM65-203ENST00000540812 ZNF646O15015 1829 aaPredicted RBP20.76■□□□□ 0.91
TRIM65-203ENST00000540812 PITPNM2Q9BZ72 1349 aa20.76■□□□□ 0.91
TRIM65-203ENST00000540812 CSF1RP07333 972 aa20.75■□□□□ 0.91
TRIM65-203ENST00000540812 COA1Q9GZY4 146 aa20.75■□□□□ 0.91
TRIM65-203ENST00000540812 MYH16Q9H6N6 1097 aa20.75■□□□□ 0.91
TRIM65-203ENST00000540812 LEMD3Q9Y2U8 911 aa20.75■□□□□ 0.91
TRIM65-203ENST00000540812 ZNF804BA4D1E1 1349 aa20.75■□□□□ 0.91
TRIM65-203ENST00000540812 EXOSC9Q06265 439 aaKnown RBP20.74■□□□□ 0.91
TRIM65-203ENST00000540812 STRIP1Q5VSL9 837 aa20.74■□□□□ 0.91
TRIM65-203ENST00000540812 PRAMEF18Q5VWM3 479 aa20.74■□□□□ 0.91
TRIM65-203ENST00000540812 MOB2Q70IA6 237 aa20.74■□□□□ 0.91
TRIM65-203ENST00000540812 RASAL3Q86YV0 1011 aa20.74■□□□□ 0.91
TRIM65-203ENST00000540812 LINS1Q8NG48 757 aa20.74■□□□□ 0.91
TRIM65-203ENST00000540812 MPHOSPH8Q99549 860 aa20.74■□□□□ 0.91
TRIM65-203ENST00000540812 DGKZQ13574 1117 aa20.73■□□□□ 0.91
TRIM65-203ENST00000540812 WDR63Q8IWG1 891 aa20.73■□□□□ 0.91
TRIM65-203ENST00000540812 CSRNP1Q96S65 589 aa20.73■□□□□ 0.91
TRIM65-203ENST00000540812 ANKRD2Q9GZV1 360 aa20.73■□□□□ 0.91
TRIM65-203ENST00000540812 SPINK5Q9NQ38 1064 aaPredicted RBP20.73■□□□□ 0.91
TRIM65-203ENST00000540812 RNF186Q9NXI6 227 aa20.73■□□□□ 0.91
TRIM65-203ENST00000540812 SAGE1Q9NXZ1 904 aa20.73■□□□□ 0.91
TRIM65-203ENST00000540812 F6X3S4 739 aa20.72■□□□□ 0.91
TRIM65-203ENST00000540812 WNT10BO00744 389 aa20.72■□□□□ 0.91
TRIM65-203ENST00000540812 TRPA1O75762 1119 aa20.72■□□□□ 0.91
TRIM65-203ENST00000540812 CHRNDQ07001 517 aa20.72■□□□□ 0.91
TRIM65-203ENST00000540812 PAPPA2Q9BXP8 1791 aa20.72■□□□□ 0.91
TRIM65-203ENST00000540812 SNAP23O00161 211 aa20.71■□□□□ 0.91
TRIM65-203ENST00000540812 SASH1O94885 1247 aa20.71■□□□□ 0.91
TRIM65-203ENST00000540812 FKBP1BP68106 108 aa20.71■□□□□ 0.91
TRIM65-203ENST00000540812 TTLL5Q6EMB2 1281 aa20.71■□□□□ 0.91
TRIM65-203ENST00000540812 OGFOD1Q8N543 542 aa20.71■□□□□ 0.91
TRIM65-203ENST00000540812 MYO3BQ8WXR4 1341 aa20.71■□□□□ 0.91
TRIM65-203ENST00000540812 UBE2Q2LH0YL09 131 aa20.7■□□□□ 0.9
TRIM65-203ENST00000540812 ANP32CO43423 234 aa20.7■□□□□ 0.9
TRIM65-203ENST00000540812 ANKRD18BA2A2Z9 1011 aa20.69■□□□□ 0.9
TRIM65-203ENST00000540812 KCNJ4P48050 445 aa20.69■□□□□ 0.9
TRIM65-203ENST00000540812 GTF2IP78347 998 aa20.69■□□□□ 0.9
TRIM65-203ENST00000540812 FOXO4P98177 505 aa20.69■□□□□ 0.9
TRIM65-203ENST00000540812 BEND3Q5T5X7 828 aa20.69■□□□□ 0.9
TRIM65-203ENST00000540812 KIAA0825Q8IV33 1275 aa20.69■□□□□ 0.9
TRIM65-203ENST00000540812 IRS2Q9Y4H2 1338 aa20.69■□□□□ 0.9
TRIM65-203ENST00000540812 CACNA1FO60840 1977 aa20.68■□□□□ 0.9
TRIM65-203ENST00000540812 ZNF316A6NFI3 1004 aaPredicted RBP20.68■□□□□ 0.9
TRIM65-203ENST00000540812 TAF5LO75529 589 aa20.68■□□□□ 0.9
TRIM65-203ENST00000540812 HELBQ8NG08 1087 aaPredicted RBP20.68■□□□□ 0.9
TRIM65-203ENST00000540812 CD209Q9NNX6 404 aa20.68■□□□□ 0.9
TRIM65-203ENST00000540812 CHMP3Q9Y3E7 222 aa20.68■□□□□ 0.9
TRIM65-203ENST00000540812 RGS19P49795 217 aa20.67■□□□□ 0.9
TRIM65-203ENST00000540812 EPHA10Q5JZY3 1008 aa20.67■□□□□ 0.9
TRIM65-203ENST00000540812 ZBED3Q96IU2 234 aaPredicted RBP20.67■□□□□ 0.9
TRIM65-203ENST00000540812 IFIT5Q13325 482 aaKnown RBP20.66■□□□□ 0.9
TRIM65-203ENST00000540812 TTLL12Q14166 644 aaPredicted RBP20.66■□□□□ 0.9
TRIM65-203ENST00000540812 AKAP11Q9UKA4 1901 aa20.66■□□□□ 0.9
TRIM65-203ENST00000540812 MMP14P50281 582 aa20.65■□□□□ 0.9
TRIM65-203ENST00000540812 CERS5Q8N5B7 392 aa20.65■□□□□ 0.9
TRIM65-203ENST00000540812 HDAC9Q9UKV0 1011 aa20.65■□□□□ 0.9
TRIM65-203ENST00000540812 MLLT1Q03111 559 aaPredicted RBP20.64■□□□□ 0.89
TRIM65-203ENST00000540812 LMBR1LQ6UX01 489 aa20.64■□□□□ 0.89
TRIM65-203ENST00000540812 C15orf52Q6ZUT6 534 aaKnown RBP20.64■□□□□ 0.89
TRIM65-203ENST00000540812 REM2Q8IYK8 340 aaPredicted RBP20.64■□□□□ 0.89
TRIM65-203ENST00000540812 ZNF594Q96JF6 807 aaPredicted RBP20.64■□□□□ 0.89
TRIM65-203ENST00000540812 PCDHAC2Q9Y5I4 1007 aa20.64■□□□□ 0.89
TRIM65-203ENST00000540812 GRM8O00222 908 aa20.63■□□□□ 0.89
TRIM65-203ENST00000540812 APOBEC3FQ8IUX4 373 aaKnown RBP20.63■□□□□ 0.89
TRIM65-203ENST00000540812 A0A1B0GUL6 1792 aa20.63■□□□□ 0.89
TRIM65-203ENST00000540812 MKRN3Q13064 507 aaKnown RBP20.62■□□□□ 0.89
TRIM65-203ENST00000540812 PRKG1Q13976 671 aa20.62■□□□□ 0.89
TRIM65-203ENST00000540812 F8W031 263 aaPredicted RBP20.61■□□□□ 0.89
TRIM65-203ENST00000540812 NF2P35240 595 aa20.61■□□□□ 0.89
TRIM65-203ENST00000540812 PTPN12Q05209 780 aaKnown RBP20.61■□□□□ 0.89
TRIM65-203ENST00000540812 FAM9BQ8IZU0 186 aa20.61■□□□□ 0.89
TRIM65-203ENST00000540812 JAG2Q9Y219 1238 aa20.61■□□□□ 0.89
TRIM65-203ENST00000540812 PLIN1O60240 522 aa20.6■□□□□ 0.89
TRIM65-203ENST00000540812 IL1R1P14778 569 aa20.6■□□□□ 0.89
TRIM65-203ENST00000540812 DLGAP5Q15398 846 aa20.6■□□□□ 0.89
TRIM65-203ENST00000540812 SLC4A10Q6U841 1118 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms