RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 DUOX1Q9NRD9 1551 aa19.15■□□□□ 0.66
DDB1-218ENST00000540784 ECE2O60344 883 aa19.15■□□□□ 0.66
DDB1-218ENST00000540784 SLC5A1P13866 664 aa19.15■□□□□ 0.66
DDB1-218ENST00000540784 FGFR2P21802 821 aa19.15■□□□□ 0.66
DDB1-218ENST00000540784 ATP2B3Q16720 1220 aa19.15■□□□□ 0.66
DDB1-218ENST00000540784 CAVIN4Q5BKX8 364 aa19.15■□□□□ 0.66
DDB1-218ENST00000540784 PODNQ7Z5L7 613 aa19.15■□□□□ 0.66
DDB1-218ENST00000540784 ERC1Q8IUD2 1116 aa19.15■□□□□ 0.66
DDB1-218ENST00000540784 EXOC6BQ9Y2D4 811 aa19.15■□□□□ 0.66
DDB1-218ENST00000540784 GLTPD2A6NH11 291 aa19.14■□□□□ 0.65
DDB1-218ENST00000540784 RAB11FIP3O75154 756 aa19.14■□□□□ 0.65
DDB1-218ENST00000540784 HIBADHP31937 336 aaKnown RBP19.14■□□□□ 0.65
DDB1-218ENST00000540784 TIMM10P62072 90 aa19.14■□□□□ 0.65
DDB1-218ENST00000540784 TNIP1Q15025 636 aa19.14■□□□□ 0.65
DDB1-218ENST00000540784 ZNF804AQ7Z570 1209 aa19.14■□□□□ 0.65
DDB1-218ENST00000540784 VPS37DQ86XT2 251 aa19.14■□□□□ 0.65
DDB1-218ENST00000540784 FAM84BQ96KN1 310 aaPredicted RBP19.14■□□□□ 0.65
DDB1-218ENST00000540784 CHD4Q14839 1912 aa19.13■□□□□ 0.65
DDB1-218ENST00000540784 YDJCA8MPS7 323 aa19.13■□□□□ 0.65
DDB1-218ENST00000540784 RAD17O75943 681 aa19.13■□□□□ 0.65
DDB1-218ENST00000540784 GYG1P46976 350 aa19.13■□□□□ 0.65
DDB1-218ENST00000540784 CXCL9Q07325 125 aa19.13■□□□□ 0.65
DDB1-218ENST00000540784 NEUROD6Q96NK8 337 aa19.13■□□□□ 0.65
DDB1-218ENST00000540784 CD209Q9NNX6 404 aa19.13■□□□□ 0.65
DDB1-218ENST00000540784 GJA3Q9Y6H8 435 aa19.13■□□□□ 0.65
DDB1-218ENST00000540784 IRS2Q9Y4H2 1338 aa19.13■□□□□ 0.65
DDB1-218ENST00000540784 LTBP1Q14766 1721 aa19.13■□□□□ 0.65
DDB1-218ENST00000540784 CCDC88AQ3V6T2 1871 aa19.12■□□□□ 0.65
DDB1-218ENST00000540784 KDM2BQ8NHM5 1336 aa19.12■□□□□ 0.65
DDB1-218ENST00000540784 APBB1O00213 710 aa19.12■□□□□ 0.65
DDB1-218ENST00000540784 CIAPIN1Q6FI81 312 aa19.12■□□□□ 0.65
DDB1-218ENST00000540784 FBXO33Q7Z6M2 555 aa19.12■□□□□ 0.65
DDB1-218ENST00000540784 DCTPP1Q9H773 170 aa19.12■□□□□ 0.65
DDB1-218ENST00000540784 GPR108Q9NPR9 543 aa19.12■□□□□ 0.65
DDB1-218ENST00000540784 KCNQ5Q9NR82 932 aa19.12■□□□□ 0.65
DDB1-218ENST00000540784 ZNF541Q9H0D2 1346 aa19.11■□□□□ 0.65
DDB1-218ENST00000540784 A0A1B0GUL7 405 aa19.11■□□□□ 0.65
DDB1-218ENST00000540784 DDNO94850 711 aaPredicted RBP19.11■□□□□ 0.65
DDB1-218ENST00000540784 GPC2Q8N158 579 aa19.11■□□□□ 0.65
DDB1-218ENST00000540784 ZNF526Q8TF50 670 aaPredicted RBP19.11■□□□□ 0.65
DDB1-218ENST00000540784 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.11■□□□□ 0.65
DDB1-218ENST00000540784 COL4A5P29400 1685 aa19.11■□□□□ 0.65
DDB1-218ENST00000540784 BCAMP50895 628 aa19.1■□□□□ 0.65
DDB1-218ENST00000540784 RHPN1Q8TCX5 695 aa19.1■□□□□ 0.65
DDB1-218ENST00000540784 KIF1BPQ96EK5 621 aa19.1■□□□□ 0.65
DDB1-218ENST00000540784 RWDD1Q9H446 243 aaPredicted RBP19.1■□□□□ 0.65
DDB1-218ENST00000540784 USP17L3A6NCW0 530 aa19.09■□□□□ 0.65
DDB1-218ENST00000540784 USP17L4A6NCW7 530 aa19.09■□□□□ 0.65
DDB1-218ENST00000540784 FRAT2O75474 233 aaPredicted RBP19.09■□□□□ 0.65
DDB1-218ENST00000540784 IL1R1P14778 569 aa19.09■□□□□ 0.65
DDB1-218ENST00000540784 HDAC1Q13547 482 aaPredicted RBP19.09■□□□□ 0.65
DDB1-218ENST00000540784 TNNI3KQ59H18 835 aa19.09■□□□□ 0.65
DDB1-218ENST00000540784 GORABQ5T7V8 394 aa19.09■□□□□ 0.65
DDB1-218ENST00000540784 USP17L1Q7RTZ2 530 aa19.09■□□□□ 0.65
DDB1-218ENST00000540784 XAGE2Q96GT9 111 aa19.09■□□□□ 0.65
DDB1-218ENST00000540784 FPGT-TNNI3KV9GXZ4 949 aa19.09■□□□□ 0.65
DDB1-218ENST00000540784 DICER1Q9UPY3 1922 aaKnown RBP19.08■□□□□ 0.65
DDB1-218ENST00000540784 PSMD14O00487 310 aa19.08■□□□□ 0.64
DDB1-218ENST00000540784 ADORA1P30542 326 aa19.08■□□□□ 0.64
DDB1-218ENST00000540784 TTLL5Q6EMB2 1281 aa19.08■□□□□ 0.64
DDB1-218ENST00000540784 TDRD7Q8NHU6 1098 aaKnown RBP19.08■□□□□ 0.64
DDB1-218ENST00000540784 FBXW7Q969H0 707 aa19.08■□□□□ 0.64
DDB1-218ENST00000540784 GNL3LQ9NVN8 582 aaKnown RBP19.08■□□□□ 0.64
DDB1-218ENST00000540784 NEFLP07196 543 aa19.07■□□□□ 0.64
DDB1-218ENST00000540784 VIL1P09327 827 aaKnown RBP19.07■□□□□ 0.64
DDB1-218ENST00000540784 GTF2IP78347 998 aa19.07■□□□□ 0.64
DDB1-218ENST00000540784 STRIP1Q5VSL9 837 aa19.07■□□□□ 0.64
DDB1-218ENST00000540784 CLASRPQ8N2M8 674 aaKnown RBP19.07■□□□□ 0.64
DDB1-218ENST00000540784 BCL11AQ9H165 835 aa19.07■□□□□ 0.64
DDB1-218ENST00000540784 RRAGCQ9HB90 399 aa19.07■□□□□ 0.64
DDB1-218ENST00000540784 GPBP1L1Q9HC44 474 aaPredicted RBP19.07■□□□□ 0.64
DDB1-218ENST00000540784 IL1RAPL2Q9NP60 686 aa19.07■□□□□ 0.64
DDB1-218ENST00000540784 CCDC102BQ68D86 513 aa19.06■□□□□ 0.64
DDB1-218ENST00000540784 EAF2Q96CJ1 260 aaPredicted RBP19.06■□□□□ 0.64
DDB1-218ENST00000540784 LRRCC1Q9C099 1032 aa19.06■□□□□ 0.64
DDB1-218ENST00000540784 IQSEC3Q9UPP2 1182 aaPredicted RBP19.06■□□□□ 0.64
DDB1-218ENST00000540784 AACSQ86V21 672 aa19.05■□□□□ 0.64
DDB1-218ENST00000540784 ZNF784Q8NCA9 323 aaPredicted RBP19.05■□□□□ 0.64
DDB1-218ENST00000540784 GCC1Q96CN9 775 aa19.05■□□□□ 0.64
DDB1-218ENST00000540784 CCDC8Q9H0W5 538 aaPredicted RBP19.05■□□□□ 0.64
DDB1-218ENST00000540784 ZBTB12Q9Y330 459 aaPredicted RBP19.05■□□□□ 0.64
DDB1-218ENST00000540784 IGHDP01880 384 aa19.04■□□□□ 0.64
DDB1-218ENST00000540784 VEGFAP15692 232 aaPredicted RBP19.04■□□□□ 0.64
DDB1-218ENST00000540784 PHKA1P46020 1223 aa19.04■□□□□ 0.64
DDB1-218ENST00000540784 GMPSP49915 693 aaPredicted RBP19.04■□□□□ 0.64
DDB1-218ENST00000540784 CCDC158Q5M9N0 1113 aa19.04■□□□□ 0.64
DDB1-218ENST00000540784 DACT2Q5SW24 774 aa19.04■□□□□ 0.64
DDB1-218ENST00000540784 RSBN1LQ6PCB5 846 aaPredicted RBP19.04■□□□□ 0.64
DDB1-218ENST00000540784 L3MBTL3Q96JM7 780 aaPredicted RBP19.04■□□□□ 0.64
DDB1-218ENST00000540784 A0A1B0GUL6 1792 aa19.04■□□□□ 0.64
DDB1-218ENST00000540784 SMARCA5O60264 1052 aaPredicted RBP19.03■□□□□ 0.64
DDB1-218ENST00000540784 IFIT2P09913 472 aaKnown RBP19.03■□□□□ 0.64
DDB1-218ENST00000540784 RPS12P25398 132 aaKnown RBP19.03■□□□□ 0.64
DDB1-218ENST00000540784 LMOD1P29536 600 aaPredicted RBP19.03■□□□□ 0.64
DDB1-218ENST00000540784 DPF2Q92785 391 aa19.03■□□□□ 0.64
DDB1-218ENST00000540784 DBNDD2Q9BQY9 259 aa19.03■□□□□ 0.64
DDB1-218ENST00000540784 ZBTB47Q9UFB7 747 aaPredicted RBP19.03■□□□□ 0.64
DDB1-218ENST00000540784 FAM205AQ6ZU69 1335 aa19.02■□□□□ 0.64
DDB1-218ENST00000540784 IQCA1LA6NCM1 817 aa19.02■□□□□ 0.64
DDB1-218ENST00000540784 SEMA3EO15041 775 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms