RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 TRIM11Q96F44 468 aa6.48□□□□□ -1.37
MDM2-226ENST00000540352 SUV39H2Q9H5I1 410 aa6.48□□□□□ -1.37
MDM2-226ENST00000540352 SALL4Q9UJQ4 1053 aa6.48□□□□□ -1.37
MDM2-226ENST00000540352 TRIM33Q9UPN9 1127 aa6.48□□□□□ -1.37
MDM2-226ENST00000540352 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.48□□□□□ -1.37
MDM2-226ENST00000540352 EIF1AYO14602 144 aaKnown RBP6.47□□□□□ -1.37
MDM2-226ENST00000540352 NID1P14543 1247 aa6.47□□□□□ -1.37
MDM2-226ENST00000540352 MAPK8P45983 427 aa6.47□□□□□ -1.37
MDM2-226ENST00000540352 RBM10P98175 930 aaKnown RBP6.47□□□□□ -1.37
MDM2-226ENST00000540352 PLCB3Q01970 1234 aa6.47□□□□□ -1.37
MDM2-226ENST00000540352 PRRT3Q5FWE3 981 aa6.47□□□□□ -1.37
MDM2-226ENST00000540352 USPL1Q5W0Q7 1092 aa6.47□□□□□ -1.37
MDM2-226ENST00000540352 CEP120Q8N960 986 aa6.47□□□□□ -1.37
MDM2-226ENST00000540352 ASB16Q96NS5 453 aa6.47□□□□□ -1.37
MDM2-226ENST00000540352 OSMRQ99650 979 aa6.47□□□□□ -1.37
MDM2-226ENST00000540352 PBX4Q9BYU1 374 aa6.47□□□□□ -1.37
MDM2-226ENST00000540352 LATS2Q9NRM7 1088 aa6.47□□□□□ -1.37
MDM2-226ENST00000540352 FAM229AH3BQW9 127 aa6.46□□□□□ -1.38
MDM2-226ENST00000540352 TRPA1O75762 1119 aa6.46□□□□□ -1.38
MDM2-226ENST00000540352 PTPRAP18433 802 aa6.46□□□□□ -1.38
MDM2-226ENST00000540352 RAC1P63000 192 aa6.46□□□□□ -1.38
MDM2-226ENST00000540352 CCDC27Q2M243 656 aa6.46□□□□□ -1.38
MDM2-226ENST00000540352 MSL1Q68DK7 614 aa6.46□□□□□ -1.38
MDM2-226ENST00000540352 DMRTC2Q8IXT2 367 aaPredicted RBP6.46□□□□□ -1.38
MDM2-226ENST00000540352 IL22RA1Q8N6P7 574 aa6.46□□□□□ -1.38
MDM2-226ENST00000540352 TTC9Q92623 222 aa6.46□□□□□ -1.38
MDM2-226ENST00000540352 ALKBH8Q96BT7 664 aaKnown RBP6.46□□□□□ -1.38
MDM2-226ENST00000540352 CSRNP1Q96S65 589 aa6.46□□□□□ -1.38
MDM2-226ENST00000540352 PNMA6FA0A0J9YX94 578 aa6.45□□□□□ -1.38
MDM2-226ENST00000540352 PDE2AO00408 941 aaPredicted RBP6.45□□□□□ -1.38
MDM2-226ENST00000540352 TREHO43280 583 aa6.45□□□□□ -1.38
MDM2-226ENST00000540352 IGHA2P01877 340 aa6.45□□□□□ -1.38
MDM2-226ENST00000540352 CDC25BP30305 580 aa6.45□□□□□ -1.38
MDM2-226ENST00000540352 KCNMA1Q12791 1236 aa6.45□□□□□ -1.38
MDM2-226ENST00000540352 TRIM28Q13263 835 aaKnown RBP6.45□□□□□ -1.38
MDM2-226ENST00000540352 GRIK5Q16478 980 aa6.45□□□□□ -1.38
MDM2-226ENST00000540352 TMCO4Q5TGY1 634 aa6.45□□□□□ -1.38
MDM2-226ENST00000540352 GALNT12Q8IXK2 581 aa6.45□□□□□ -1.38
MDM2-226ENST00000540352 ASAP3Q8TDY4 903 aa6.45□□□□□ -1.38
MDM2-226ENST00000540352 ZKSCAN3Q9BRR0 538 aa6.45□□□□□ -1.38
MDM2-226ENST00000540352 DNAJC25Q9H1X3 360 aa6.45□□□□□ -1.38
MDM2-226ENST00000540352 NPHS2Q9NP85 383 aa6.45□□□□□ -1.38
MDM2-226ENST00000540352 DZANK1Q9NVP4 752 aa6.45□□□□□ -1.38
MDM2-226ENST00000540352 GADD45BO75293 160 aaPredicted RBP6.44□□□□□ -1.38
MDM2-226ENST00000540352 CDC27P30260 824 aa6.44□□□□□ -1.38
MDM2-226ENST00000540352 CABP4P57796 275 aa6.44□□□□□ -1.38
MDM2-226ENST00000540352 ATP2B2Q01814 1243 aa6.44□□□□□ -1.38
MDM2-226ENST00000540352 RASSF7Q02833 373 aa6.44□□□□□ -1.38
MDM2-226ENST00000540352 CACTIN-AS1Q8N1I8 211 aa6.44□□□□□ -1.38
MDM2-226ENST00000540352 HHIPQ96QV1 700 aa6.44□□□□□ -1.38
MDM2-226ENST00000540352 GDF11O95390 407 aa6.43□□□□□ -1.38
MDM2-226ENST00000540352 SPATA31C1P0DKV0 1188 aa6.43□□□□□ -1.38
MDM2-226ENST00000540352 COL8A1P27658 744 aa6.43□□□□□ -1.38
MDM2-226ENST00000540352 COL9A3Q14050 684 aaPredicted RBP6.43□□□□□ -1.38
MDM2-226ENST00000540352 TXNDC11Q6PKC3 985 aa6.43□□□□□ -1.38
MDM2-226ENST00000540352 CCDC74AQ96AQ1 378 aa6.43□□□□□ -1.38
MDM2-226ENST00000540352 POP1Q99575 1024 aaKnown RBP6.43□□□□□ -1.38
MDM2-226ENST00000540352 EHD4Q9H223 541 aa6.43□□□□□ -1.38
MDM2-226ENST00000540352 LIN7BQ9HAP6 207 aa6.43□□□□□ -1.38
MDM2-226ENST00000540352 NLRP2Q9NX02 1062 aa6.43□□□□□ -1.38
MDM2-226ENST00000540352 A0A0A0MRY4 1105 aa6.42□□□□□ -1.38
MDM2-226ENST00000540352 A0A0U1RQG5 324 aaPredicted RBP6.42□□□□□ -1.38
MDM2-226ENST00000540352 ANKRD33BA6NCL7 494 aa6.42□□□□□ -1.38
MDM2-226ENST00000540352 DSC3Q14574 896 aa6.42□□□□□ -1.38
MDM2-226ENST00000540352 PEAR1Q5VY43 1037 aaPredicted RBP6.42□□□□□ -1.38
MDM2-226ENST00000540352 FAM117BQ6P1L5 589 aa6.42□□□□□ -1.38
MDM2-226ENST00000540352 ALYREFQ86V81 257 aaKnown RBP6.42□□□□□ -1.38
MDM2-226ENST00000540352 TMEM151AQ8N4L1 468 aa6.42□□□□□ -1.38
MDM2-226ENST00000540352 TMEM102Q8N9M5 508 aaPredicted RBP6.42□□□□□ -1.38
MDM2-226ENST00000540352 MUC3BQ9H195 1237 aa6.42□□□□□ -1.38
MDM2-226ENST00000540352 SH2B1Q9NRF2 756 aaPredicted RBP6.42□□□□□ -1.38
MDM2-226ENST00000540352 NOP58Q9Y2X3 529 aaKnown RBP6.42□□□□□ -1.38
MDM2-226ENST00000540352 PPME1Q9Y570 386 aa6.42□□□□□ -1.38
MDM2-226ENST00000540352 WASHC2CQ9Y4E1 1318 aa6.42□□□□□ -1.38
MDM2-226ENST00000540352 A0A1W2PP55 124 aa6.41□□□□□ -1.38
MDM2-226ENST00000540352 LINC01387J3KSC0 135 aa6.41□□□□□ -1.38
MDM2-226ENST00000540352 RRP9O43818 475 aaKnown RBP6.41□□□□□ -1.38
MDM2-226ENST00000540352 APBA3O96018 575 aa6.41□□□□□ -1.38
MDM2-226ENST00000540352 FMR1Q06787 632 aaKnown RBP eCLIP6.41□□□□□ -1.38
MDM2-226ENST00000540352 ENOX2Q16206 610 aaKnown RBP6.41□□□□□ -1.38
MDM2-226ENST00000540352 ILDR2Q71H61 639 aa6.41□□□□□ -1.38
MDM2-226ENST00000540352 EPS8L3Q8TE67 593 aaKnown RBP6.41□□□□□ -1.38
MDM2-226ENST00000540352 DCAF5Q96JK2 942 aa6.41□□□□□ -1.38
MDM2-226ENST00000540352 USP35Q9P2H5 1018 aa6.41□□□□□ -1.38
MDM2-226ENST00000540352 NFKBIEO00221 500 aa6.4□□□□□ -1.39
MDM2-226ENST00000540352 P4HBP07237 508 aaKnown RBP6.4□□□□□ -1.39
MDM2-226ENST00000540352 EPHA1P21709 976 aa6.4□□□□□ -1.39
MDM2-226ENST00000540352 BAG6P46379 1132 aa6.4□□□□□ -1.39
MDM2-226ENST00000540352 MFAP1P55081 439 aaKnown RBP6.4□□□□□ -1.39
MDM2-226ENST00000540352 NPM2Q86SE8 214 aaKnown RBP6.4□□□□□ -1.39
MDM2-226ENST00000540352 FMR1NBQ8N0W7 255 aaPredicted RBP6.4□□□□□ -1.39
MDM2-226ENST00000540352 DTWD1Q8N5C7 304 aa6.4□□□□□ -1.39
MDM2-226ENST00000540352 BSNDQ8WZ55 320 aa6.4□□□□□ -1.39
MDM2-226ENST00000540352 NXPE3Q969Y0 559 aa6.4□□□□□ -1.39
MDM2-226ENST00000540352 CDK11AQ9UQ88 783 aaPredicted RBP6.4□□□□□ -1.39
MDM2-226ENST00000540352 WASHC2AQ641Q2 1341 aa6.4□□□□□ -1.39
MDM2-226ENST00000540352 LOC105371045A0A1W2PR82 267 aa6.39□□□□□ -1.39
MDM2-226ENST00000540352 METTL12A8MUP2 240 aa6.39□□□□□ -1.39
MDM2-226ENST00000540352 LDHBP07195 334 aaKnown RBP6.39□□□□□ -1.39
MDM2-226ENST00000540352 ELNP15502 786 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms