RNA–Protein interactions for RNA: ENST00000539891.5

SLC3A2-215, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-215ENST00000539891 SHTN1A0MZ66 631 aa13.58□□□□□ -0.24
SLC3A2-215ENST00000539891 USP17L3A6NCW0 530 aa13.58□□□□□ -0.24
SLC3A2-215ENST00000539891 USP17L4A6NCW7 530 aa13.58□□□□□ -0.24
SLC3A2-215ENST00000539891 TAF5LO75529 589 aa13.58□□□□□ -0.24
SLC3A2-215ENST00000539891 BCAR3O75815 825 aa13.58□□□□□ -0.24
SLC3A2-215ENST00000539891 KLRK1P26718 216 aa13.58□□□□□ -0.24
SLC3A2-215ENST00000539891 KCNJ4P48050 445 aa13.58□□□□□ -0.24
SLC3A2-215ENST00000539891 HIRAP54198 1017 aaPredicted RBP13.58□□□□□ -0.24
SLC3A2-215ENST00000539891 RSBN1LQ6PCB5 846 aaPredicted RBP13.58□□□□□ -0.24
SLC3A2-215ENST00000539891 USP17L1Q7RTZ2 530 aa13.58□□□□□ -0.24
SLC3A2-215ENST00000539891 HELBQ8NG08 1087 aaPredicted RBP13.58□□□□□ -0.24
SLC3A2-215ENST00000539891 GMLQ99445 158 aa13.58□□□□□ -0.24
SLC3A2-215ENST00000539891 HDAC5Q9UQL6 1122 aa13.58□□□□□ -0.24
SLC3A2-215ENST00000539891 RIPOR2Q9Y4F9 1068 aa13.58□□□□□ -0.24
SLC3A2-215ENST00000539891 STRIP1Q5VSL9 837 aa13.57□□□□□ -0.24
SLC3A2-215ENST00000539891 TRPM4Q8TD43 1214 aa13.57□□□□□ -0.24
SLC3A2-215ENST00000539891 KLRG1Q96E93 195 aa13.57□□□□□ -0.24
SLC3A2-215ENST00000539891 SNAP23O00161 211 aa13.56□□□□□ -0.24
SLC3A2-215ENST00000539891 UBTFL1P0CB47 393 aaPredicted RBP13.56□□□□□ -0.24
SLC3A2-215ENST00000539891 TRIM27P14373 513 aa13.56□□□□□ -0.24
SLC3A2-215ENST00000539891 ZNF280AP59817 542 aaPredicted RBP13.56□□□□□ -0.24
SLC3A2-215ENST00000539891 UBE4AQ14139 1066 aa13.56□□□□□ -0.24
SLC3A2-215ENST00000539891 DACT2Q5SW24 774 aa13.56□□□□□ -0.24
SLC3A2-215ENST00000539891 ATF7IPQ6VMQ6 1270 aa13.56□□□□□ -0.24
SLC3A2-215ENST00000539891 SAMD7Q7Z3H4 446 aa13.56□□□□□ -0.24
SLC3A2-215ENST00000539891 PUS3Q9BZE2 481 aaKnown RBP13.56□□□□□ -0.24
SLC3A2-215ENST00000539891 CD209Q9NNX6 404 aa13.56□□□□□ -0.24
SLC3A2-215ENST00000539891 MROH5Q6ZUA9 1318 aa13.56□□□□□ -0.24
SLC3A2-215ENST00000539891 TMEM88BA6NKF7 163 aa13.55□□□□□ -0.24
SLC3A2-215ENST00000539891 EGFRP00533 1210 aa13.55□□□□□ -0.24
SLC3A2-215ENST00000539891 RFX5P48382 616 aaPredicted RBP13.55□□□□□ -0.24
SLC3A2-215ENST00000539891 MMP14P50281 582 aa13.55□□□□□ -0.24
SLC3A2-215ENST00000539891 MYO3BQ8WXR4 1341 aa13.55□□□□□ -0.24
SLC3A2-215ENST00000539891 USP17L8P0C7I0 530 aa13.54□□□□□ -0.24
SLC3A2-215ENST00000539891 IL1R1P14778 569 aa13.54□□□□□ -0.24
SLC3A2-215ENST00000539891 TBC1D10BQ4KMP7 808 aaPredicted RBP13.54□□□□□ -0.24
SLC3A2-215ENST00000539891 ZKSCAN2Q63HK3 967 aa13.54□□□□□ -0.24
SLC3A2-215ENST00000539891 TTLL5Q6EMB2 1281 aa13.54□□□□□ -0.24
SLC3A2-215ENST00000539891 ZNF804AQ7Z570 1209 aa13.54□□□□□ -0.24
SLC3A2-215ENST00000539891 JMYQ8N9B5 988 aa13.54□□□□□ -0.24
SLC3A2-215ENST00000539891 FRAT1Q92837 279 aaPredicted RBP13.54□□□□□ -0.24
SLC3A2-215ENST00000539891 PLIN1O60240 522 aa13.53□□□□□ -0.24
SLC3A2-215ENST00000539891 GNAI3P08754 354 aa13.53□□□□□ -0.24
SLC3A2-215ENST00000539891 PTPN12Q05209 780 aaKnown RBP13.53□□□□□ -0.24
SLC3A2-215ENST00000539891 KIF4BQ2VIQ3 1234 aa13.53□□□□□ -0.24
SLC3A2-215ENST00000539891 LRRC24Q50LG9 513 aa13.53□□□□□ -0.24
SLC3A2-215ENST00000539891 CDC37L1Q7L3B6 337 aa13.53□□□□□ -0.24
SLC3A2-215ENST00000539891 VGLL2Q8N8G2 317 aa13.53□□□□□ -0.24
SLC3A2-215ENST00000539891 KLHDC4Q8TBB5 520 aa13.53□□□□□ -0.24
SLC3A2-215ENST00000539891 MEIS3Q99687 375 aa13.53□□□□□ -0.24
SLC3A2-215ENST00000539891 FBXO3Q9UK99 471 aa13.53□□□□□ -0.24
SLC3A2-215ENST00000539891 LRRFIP2Q9Y608 721 aaKnown RBP13.53□□□□□ -0.24
SLC3A2-215ENST00000539891 EYA2O00167 538 aa13.52□□□□□ -0.25
SLC3A2-215ENST00000539891 PDE8BO95263 885 aa13.52□□□□□ -0.25
SLC3A2-215ENST00000539891 GLIS2Q9BZE0 524 aaPredicted RBP13.52□□□□□ -0.25
SLC3A2-215ENST00000539891 TNNQ9UQP3 1299 aa13.52□□□□□ -0.25
SLC3A2-215ENST00000539891 ARAP2Q8WZ64 1704 aa13.51□□□□□ -0.25
SLC3A2-215ENST00000539891 ECM29Q5VYK3 1845 aa13.51□□□□□ -0.25
SLC3A2-215ENST00000539891 MYH13Q9UKX3 1938 aa13.51□□□□□ -0.25
SLC3A2-215ENST00000539891 TRAF5O00463 557 aa13.51□□□□□ -0.25
SLC3A2-215ENST00000539891 FKBP1AP62942 108 aaKnown RBP13.51□□□□□ -0.25
SLC3A2-215ENST00000539891 GTF2IP78347 998 aa13.51□□□□□ -0.25
SLC3A2-215ENST00000539891 MTX1Q13505 466 aa13.51□□□□□ -0.25
SLC3A2-215ENST00000539891 METTL24Q5JXM2 366 aa13.51□□□□□ -0.25
SLC3A2-215ENST00000539891 RBM26Q5T8P6 1007 aaKnown RBP13.51□□□□□ -0.25
SLC3A2-215ENST00000539891 CST9Q5W186 159 aa13.51□□□□□ -0.25
SLC3A2-215ENST00000539891 MYOZ2Q9NPC6 264 aa13.51□□□□□ -0.25
SLC3A2-215ENST00000539891 CNTNAP1P78357 1384 aa13.51□□□□□ -0.25
SLC3A2-215ENST00000539891 CIAO1O76071 339 aa13.5□□□□□ -0.25
SLC3A2-215ENST00000539891 SASH1O94885 1247 aa13.5□□□□□ -0.25
SLC3A2-215ENST00000539891 HIBADHP31937 336 aaKnown RBP13.5□□□□□ -0.25
SLC3A2-215ENST00000539891 FMR1Q06787 632 aaKnown RBP eCLIP13.5□□□□□ -0.25
SLC3A2-215ENST00000539891 ATG9AQ7Z3C6 839 aa13.5□□□□□ -0.25
SLC3A2-215ENST00000539891 OGFOD1Q8N543 542 aa13.5□□□□□ -0.25
SLC3A2-215ENST00000539891 TDRD7Q8NHU6 1098 aaKnown RBP13.5□□□□□ -0.25
SLC3A2-215ENST00000539891 FBXW7Q969H0 707 aa13.5□□□□□ -0.25
SLC3A2-215ENST00000539891 CLUAP1Q96AJ1 413 aa13.5□□□□□ -0.25
SLC3A2-215ENST00000539891 DCPSQ96C86 337 aaKnown RBP13.5□□□□□ -0.25
SLC3A2-215ENST00000539891 FAM84BQ96KN1 310 aaPredicted RBP13.5□□□□□ -0.25
SLC3A2-215ENST00000539891 MXD3Q9BW11 206 aa13.5□□□□□ -0.25
SLC3A2-215ENST00000539891 COPRSQ9NQ92 184 aa13.5□□□□□ -0.25
SLC3A2-215ENST00000539891 FAM205AQ6ZU69 1335 aa13.5□□□□□ -0.25
SLC3A2-215ENST00000539891 PITPNM2Q9BZ72 1349 aa13.49□□□□□ -0.25
SLC3A2-215ENST00000539891 RASSF10A6NK89 507 aa13.49□□□□□ -0.25
SLC3A2-215ENST00000539891 FGFR2P21802 821 aa13.49□□□□□ -0.25
SLC3A2-215ENST00000539891 GYG1P46976 350 aa13.49□□□□□ -0.25
SLC3A2-215ENST00000539891 SCARF1Q14162 830 aa13.49□□□□□ -0.25
SLC3A2-215ENST00000539891 FBXO33Q7Z6M2 555 aa13.49□□□□□ -0.25
SLC3A2-215ENST00000539891 TMEM57Q8N5G2 664 aa13.49□□□□□ -0.25
SLC3A2-215ENST00000539891 PUM3Q15397 648 aaKnown RBP13.48□□□□□ -0.25
SLC3A2-215ENST00000539891 DEFB115Q30KQ5 88 aa13.48□□□□□ -0.25
SLC3A2-215ENST00000539891 KRT26Q7Z3Y9 468 aa13.48□□□□□ -0.25
SLC3A2-215ENST00000539891 USP48Q86UV5 1035 aa13.48□□□□□ -0.25
SLC3A2-215ENST00000539891 CERS5Q8N5B7 392 aa13.48□□□□□ -0.25
SLC3A2-215ENST00000539891 GGA3Q9NZ52 723 aa13.48□□□□□ -0.25
SLC3A2-215ENST00000539891 MKRN1Q9UHC7 482 aaKnown RBP13.48□□□□□ -0.25
SLC3A2-215ENST00000539891 HDAC9Q9UKV0 1011 aa13.48□□□□□ -0.25
SLC3A2-215ENST00000539891 ASTN2O75129 1339 aaPredicted RBP13.47□□□□□ -0.25
SLC3A2-215ENST00000539891 WNT10BO00744 389 aa13.47□□□□□ -0.25
SLC3A2-215ENST00000539891 CELF2O95319 508 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms