RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 PTH1RQ03431 593 aa24.4■■□□□ 1.5
CDH5-202ENST00000539168 NECTIN1Q15223 517 aa24.4■■□□□ 1.5
CDH5-202ENST00000539168 TM6SF1Q9BZW5 370 aa24.4■■□□□ 1.5
CDH5-202ENST00000539168 GNL3LQ9NVN8 582 aaKnown RBP24.4■■□□□ 1.5
CDH5-202ENST00000539168 MINPP1Q9UNW1 487 aa24.4■■□□□ 1.5
CDH5-202ENST00000539168 PHKA1P46020 1223 aa24.39■■□□□ 1.49
CDH5-202ENST00000539168 CELF1Q92879 486 aaKnown RBP24.39■■□□□ 1.49
CDH5-202ENST00000539168 RBM8AQ9Y5S9 174 aaKnown RBP24.39■■□□□ 1.49
CDH5-202ENST00000539168 SNX14Q9Y5W7 946 aa24.39■■□□□ 1.49
CDH5-202ENST00000539168 U3KPZ7 1027 aaPredicted RBP24.39■■□□□ 1.49
CDH5-202ENST00000539168 AKAP11Q9UKA4 1901 aa24.38■■□□□ 1.49
CDH5-202ENST00000539168 HSP90AA1P07900 732 aaKnown RBP24.38■■□□□ 1.49
CDH5-202ENST00000539168 GRAPQ13588 217 aa24.37■■□□□ 1.49
CDH5-202ENST00000539168 SCARF1Q14162 830 aa24.37■■□□□ 1.49
CDH5-202ENST00000539168 GRAPLQ8TC17 118 aaPredicted RBP24.37■■□□□ 1.49
CDH5-202ENST00000539168 ANTXR1Q9H6X2 564 aa24.37■■□□□ 1.49
CDH5-202ENST00000539168 A0A1B0GUL6 1792 aa24.37■■□□□ 1.49
CDH5-202ENST00000539168 PSMA5P28066 241 aa24.37■■□□□ 1.49
CDH5-202ENST00000539168 ZNF827Q17R98 1081 aa24.37■■□□□ 1.49
CDH5-202ENST00000539168 CAVIN4Q5BKX8 364 aa24.37■■□□□ 1.49
CDH5-202ENST00000539168 DSCC1Q9BVC3 393 aa24.37■■□□□ 1.49
CDH5-202ENST00000539168 ZBTB22O15209 634 aa24.36■■□□□ 1.49
CDH5-202ENST00000539168 KRT32Q14532 448 aa24.36■■□□□ 1.49
CDH5-202ENST00000539168 TSGA10IPQ3SY00 556 aa24.36■■□□□ 1.49
CDH5-202ENST00000539168 CREB3L3Q68CJ9 461 aa24.36■■□□□ 1.49
CDH5-202ENST00000539168 PRPF40BQ6NWY9 871 aaKnown RBP24.36■■□□□ 1.49
CDH5-202ENST00000539168 ZNF589Q86UQ0 364 aaPredicted RBP24.36■■□□□ 1.49
CDH5-202ENST00000539168 SPATA5Q8NB90 893 aa24.36■■□□□ 1.49
CDH5-202ENST00000539168 APPBP2Q92624 585 aa24.36■■□□□ 1.49
CDH5-202ENST00000539168 RPGRQ92834 1020 aaKnown RBP24.36■■□□□ 1.49
CDH5-202ENST00000539168 CIZ1Q9ULV3 898 aaPredicted RBP24.36■■□□□ 1.49
CDH5-202ENST00000539168 POLRMTO00411 1230 aaKnown RBP24.35■■□□□ 1.49
CDH5-202ENST00000539168 CD2BP2O95400 341 aaKnown RBP24.35■■□□□ 1.49
CDH5-202ENST00000539168 CRY2Q49AN0 593 aa24.35■■□□□ 1.49
CDH5-202ENST00000539168 TNRC6CQ9HCJ0 1690 aaKnown RBP24.35■■□□□ 1.49
CDH5-202ENST00000539168 MYH7P12883 1935 aa24.35■■□□□ 1.49
CDH5-202ENST00000539168 RBM17Q96I25 401 aaKnown RBP24.34■■□□□ 1.49
CDH5-202ENST00000539168 SLKQ9H2G2 1235 aaPredicted RBP24.34■■□□□ 1.49
CDH5-202ENST00000539168 CHMP5Q9NZZ3 219 aa24.34■■□□□ 1.49
CDH5-202ENST00000539168 ZNF804BA4D1E1 1349 aa24.34■■□□□ 1.49
CDH5-202ENST00000539168 SEMA3EO15041 775 aa24.34■■□□□ 1.49
CDH5-202ENST00000539168 CYP2E1P05181 493 aaPredicted RBP24.34■■□□□ 1.49
CDH5-202ENST00000539168 UBE3CQ15386 1083 aa24.34■■□□□ 1.49
CDH5-202ENST00000539168 COL23A1Q86Y22 540 aaPredicted RBP24.34■■□□□ 1.49
CDH5-202ENST00000539168 ANP32EQ9BTT0 268 aa24.33■■□□□ 1.49
CDH5-202ENST00000539168 SLC27A2O14975 620 aa24.32■■□□□ 1.48
CDH5-202ENST00000539168 MAP3K12Q12852 859 aa24.32■■□□□ 1.48
CDH5-202ENST00000539168 TMC4Q7Z404 712 aa24.32■■□□□ 1.48
CDH5-202ENST00000539168 RASEFQ8IZ41 740 aa24.32■■□□□ 1.48
CDH5-202ENST00000539168 MAST3O60307 1309 aa24.32■■□□□ 1.48
CDH5-202ENST00000539168 KLRG2A4D1S0 409 aaPredicted RBP24.31■■□□□ 1.48
CDH5-202ENST00000539168 ADD2P35612 726 aa24.31■■□□□ 1.48
CDH5-202ENST00000539168 DDR1Q08345 913 aa24.31■■□□□ 1.48
CDH5-202ENST00000539168 RASGRF1Q13972 1273 aa24.31■■□□□ 1.48
CDH5-202ENST00000539168 WASHC4Q2M389 1173 aa24.31■■□□□ 1.48
CDH5-202ENST00000539168 CCDC24Q8N4L8 307 aa24.31■■□□□ 1.48
CDH5-202ENST00000539168 LEMD3Q9Y2U8 911 aa24.31■■□□□ 1.48
CDH5-202ENST00000539168 COL4A1P02462 1669 aa24.31■■□□□ 1.48
CDH5-202ENST00000539168 HOXA10P31260 410 aaPredicted RBP24.3■■□□□ 1.48
CDH5-202ENST00000539168 BCAMP50895 628 aa24.3■■□□□ 1.48
CDH5-202ENST00000539168 VPS37DQ86XT2 251 aa24.3■■□□□ 1.48
CDH5-202ENST00000539168 SEC62Q99442 399 aaKnown RBP24.3■■□□□ 1.48
CDH5-202ENST00000539168 ZSWIM6Q9HCJ5 1215 aa24.3■■□□□ 1.48
CDH5-202ENST00000539168 CYP46A1Q9Y6A2 500 aa24.3■■□□□ 1.48
CDH5-202ENST00000539168 TAF1P21675 1872 aa24.3■■□□□ 1.48
CDH5-202ENST00000539168 IGSF3O75054 1194 aa24.3■■□□□ 1.48
CDH5-202ENST00000539168 BBOX1O75936 387 aa24.3■■□□□ 1.48
CDH5-202ENST00000539168 PI16Q6UXB8 463 aa24.3■■□□□ 1.48
CDH5-202ENST00000539168 CRAMP1Q96RY5 1269 aa24.3■■□□□ 1.48
CDH5-202ENST00000539168 CWC22Q9HCG8 908 aaKnown RBP24.3■■□□□ 1.48
CDH5-202ENST00000539168 CTNNA3Q9UI47 895 aa24.3■■□□□ 1.48
CDH5-202ENST00000539168 DENND2AQ9ULE3 1009 aa24.3■■□□□ 1.48
CDH5-202ENST00000539168 PDS5AQ29RF7 1337 aaKnown RBP24.3■■□□□ 1.48
CDH5-202ENST00000539168 SF3B2Q13435 895 aaKnown RBP24.29■■□□□ 1.48
CDH5-202ENST00000539168 SLC9C2Q5TAH2 1124 aa24.29■■□□□ 1.48
CDH5-202ENST00000539168 VPS53Q5VIR6 699 aa24.29■■□□□ 1.48
CDH5-202ENST00000539168 CAMKK2Q96RR4 588 aa24.29■■□□□ 1.48
CDH5-202ENST00000539168 BRIP1Q9BX63 1249 aa24.29■■□□□ 1.48
CDH5-202ENST00000539168 NRXN2Q9P2S2 1712 aa24.28■■□□□ 1.48
CDH5-202ENST00000539168 IDH1O75874 414 aaKnown RBP24.28■■□□□ 1.48
CDH5-202ENST00000539168 TMED8Q6PL24 325 aaPredicted RBP24.28■■□□□ 1.48
CDH5-202ENST00000539168 CCDC129Q6ZRS4 1044 aa24.28■■□□□ 1.48
CDH5-202ENST00000539168 OSBP2Q969R2 916 aa24.28■■□□□ 1.48
CDH5-202ENST00000539168 JAKMIP1Q96N16 626 aaKnown RBP24.28■■□□□ 1.48
CDH5-202ENST00000539168 UPF3BQ9BZI7 483 aaKnown RBP24.28■■□□□ 1.48
CDH5-202ENST00000539168 PIH1D3Q9NQM4 214 aaKnown RBP24.28■■□□□ 1.48
CDH5-202ENST00000539168 STK32BQ9NY57 414 aa24.28■■□□□ 1.48
CDH5-202ENST00000539168 DOCK2Q92608 1830 aa24.28■■□□□ 1.48
CDH5-202ENST00000539168 SNAP23O00161 211 aa24.27■■□□□ 1.48
CDH5-202ENST00000539168 CASTP20810 708 aaKnown RBP24.27■■□□□ 1.48
CDH5-202ENST00000539168 FBXO33Q7Z6M2 555 aa24.27■■□□□ 1.48
CDH5-202ENST00000539168 PARP3Q9Y6F1 533 aa24.27■■□□□ 1.48
CDH5-202ENST00000539168 PNPLA7Q6ZV29 1317 aa24.27■■□□□ 1.48
CDH5-202ENST00000539168 RPAP1Q9BWH6 1393 aaPredicted RBP24.27■■□□□ 1.48
CDH5-202ENST00000539168 HSPD1P10809 573 aaKnown RBP24.27■■□□□ 1.48
CDH5-202ENST00000539168 DDIT3P35638 169 aa24.27■■□□□ 1.48
CDH5-202ENST00000539168 RUFY3Q7L099 469 aa24.27■■□□□ 1.48
CDH5-202ENST00000539168 SPRYD3Q8NCJ5 442 aa24.27■■□□□ 1.48
CDH5-202ENST00000539168 TTC14Q96N46 770 aa24.27■■□□□ 1.48
CDH5-202ENST00000539168 XDHP47989 1333 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms