RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-215ENST00000537551 USP17L4A6NCW7 530 aa29.05■■■□□ 2.24
CHFR-215ENST00000537551 RPS12P25398 132 aaKnown RBP29.05■■■□□ 2.24
CHFR-215ENST00000537551 LRRC24Q50LG9 513 aa29.05■■■□□ 2.24
CHFR-215ENST00000537551 USP17L1Q7RTZ2 530 aa29.05■■■□□ 2.24
CHFR-215ENST00000537551 TMEM57Q8N5G2 664 aa29.05■■■□□ 2.24
CHFR-215ENST00000537551 FBXW7Q969H0 707 aa29.05■■■□□ 2.24
CHFR-215ENST00000537551 MICALL2Q8IY33 904 aa29.04■■■□□ 2.24
CHFR-215ENST00000537551 METTL24Q5JXM2 366 aa29.03■■■□□ 2.24
CHFR-215ENST00000537551 DZIP1LQ8IYY4 767 aaKnown RBP29.03■■■□□ 2.24
CHFR-215ENST00000537551 SHTN1A0MZ66 631 aa29.02■■■□□ 2.24
CHFR-215ENST00000537551 MAP1SQ66K74 1059 aaPredicted RBP29.02■■■□□ 2.24
CHFR-215ENST00000537551 RSBN1LQ6PCB5 846 aaPredicted RBP29.02■■■□□ 2.24
CHFR-215ENST00000537551 SCN9AQ15858 1988 aa29.02■■■□□ 2.24
CHFR-215ENST00000537551 RFX5P48382 616 aaPredicted RBP29.01■■■□□ 2.23
CHFR-215ENST00000537551 UBE4AQ14139 1066 aa29.01■■■□□ 2.23
CHFR-215ENST00000537551 C15orf52Q6ZUT6 534 aaKnown RBP29.01■■■□□ 2.23
CHFR-215ENST00000537551 PTPN12Q05209 780 aaKnown RBP29■■■□□ 2.23
CHFR-215ENST00000537551 ZNF804AQ7Z570 1209 aa29■■■□□ 2.23
CHFR-215ENST00000537551 CNTROBQ8N137 903 aa29■■■□□ 2.23
CHFR-215ENST00000537551 AGBL3Q8NEM8 1001 aa29■■■□□ 2.23
CHFR-215ENST00000537551 CD209Q9NNX6 404 aa29■■■□□ 2.23
CHFR-215ENST00000537551 EYA2O00167 538 aa28.99■■■□□ 2.23
CHFR-215ENST00000537551 GNAI2P04899 355 aa28.99■■■□□ 2.23
CHFR-215ENST00000537551 RBM26Q5T8P6 1007 aaKnown RBP28.98■■■□□ 2.23
CHFR-215ENST00000537551 STRIP1Q5VSL9 837 aa28.98■■■□□ 2.23
CHFR-215ENST00000537551 TTLL5Q6EMB2 1281 aa28.98■■■□□ 2.23
CHFR-215ENST00000537551 SAMD7Q7Z3H4 446 aa28.98■■■□□ 2.23
CHFR-215ENST00000537551 ITPRIPQ8IWB1 547 aa28.98■■■□□ 2.23
CHFR-215ENST00000537551 TRPM4Q8TD43 1214 aa28.98■■■□□ 2.23
CHFR-215ENST00000537551 RCAN3Q9UKA8 241 aa28.98■■■□□ 2.23
CHFR-215ENST00000537551 IRS2Q9Y4H2 1338 aa28.97■■■□□ 2.23
CHFR-215ENST00000537551 SIL1Q9H173 461 aa28.97■■■□□ 2.23
CHFR-215ENST00000537551 A0A1B0GUL6 1792 aa28.97■■■□□ 2.23
CHFR-215ENST00000537551 ADAMTSL1Q8N6G6 1762 aa28.96■■■□□ 2.23
CHFR-215ENST00000537551 PDE8BO95263 885 aa28.96■■■□□ 2.23
CHFR-215ENST00000537551 ITGBL1O95965 494 aaPredicted RBP28.96■■■□□ 2.23
CHFR-215ENST00000537551 GTF2IP78347 998 aa28.96■■■□□ 2.23
CHFR-215ENST00000537551 HTRA3P83110 453 aa28.96■■■□□ 2.23
CHFR-215ENST00000537551 TBC1D10BQ4KMP7 808 aaPredicted RBP28.96■■■□□ 2.23
CHFR-215ENST00000537551 SRGAP3O43295 1099 aa28.95■■■□□ 2.22
CHFR-215ENST00000537551 RLBP1P12271 317 aa28.95■■■□□ 2.22
CHFR-215ENST00000537551 HIRAP54198 1017 aaPredicted RBP28.95■■■□□ 2.22
CHFR-215ENST00000537551 DACT2Q5SW24 774 aa28.95■■■□□ 2.22
CHFR-215ENST00000537551 MXD3Q9BW11 206 aa28.95■■■□□ 2.22
CHFR-215ENST00000537551 USP17L8P0C7I0 530 aa28.94■■■□□ 2.22
CHFR-215ENST00000537551 MS4A1P11836 297 aa28.94■■■□□ 2.22
CHFR-215ENST00000537551 YTHDC1Q96MU7 727 aaKnown RBP28.94■■■□□ 2.22
CHFR-215ENST00000537551 FBXO3Q9UK99 471 aa28.94■■■□□ 2.22
CHFR-215ENST00000537551 PA2G4Q9UQ80 394 aaKnown RBP28.94■■■□□ 2.22
CHFR-215ENST00000537551 HIBADHP31937 336 aaKnown RBP28.93■■■□□ 2.22
CHFR-215ENST00000537551 GYG1P46976 350 aa28.93■■■□□ 2.22
CHFR-215ENST00000537551 VGLL2Q8N8G2 317 aa28.93■■■□□ 2.22
CHFR-215ENST00000537551 ZC3H15Q8WU90 426 aaKnown RBP28.93■■■□□ 2.22
CHFR-215ENST00000537551 GMLQ99445 158 aa28.93■■■□□ 2.22
CHFR-215ENST00000537551 MYO3BQ8WXR4 1341 aa28.93■■■□□ 2.22
CHFR-215ENST00000537551 PASKQ96RG2 1323 aa28.93■■■□□ 2.22
CHFR-215ENST00000537551 IL1R1P14778 569 aa28.92■■■□□ 2.22
CHFR-215ENST00000537551 ATG9AQ7Z3C6 839 aa28.92■■■□□ 2.22
CHFR-215ENST00000537551 VPS37DQ86XT2 251 aa28.92■■■□□ 2.22
CHFR-215ENST00000537551 PANK1Q8TE04 598 aa28.92■■■□□ 2.22
CHFR-215ENST00000537551 PSME4Q14997 1843 aa28.92■■■□□ 2.22
CHFR-215ENST00000537551 CIAO1O76071 339 aa28.91■■■□□ 2.22
CHFR-215ENST00000537551 MTX1Q13505 466 aa28.91■■■□□ 2.22
CHFR-215ENST00000537551 PUM3Q15397 648 aaKnown RBP28.91■■■□□ 2.22
CHFR-215ENST00000537551 KIF4BQ2VIQ3 1234 aa28.91■■■□□ 2.22
CHFR-215ENST00000537551 FAM84BQ96KN1 310 aaPredicted RBP28.91■■■□□ 2.22
CHFR-215ENST00000537551 COPRSQ9NQ92 184 aa28.91■■■□□ 2.22
CHFR-215ENST00000537551 CEP126Q9P2H0 1117 aa28.91■■■□□ 2.22
CHFR-215ENST00000537551 ZNF609O15014 1411 aa28.9■■■□□ 2.22
CHFR-215ENST00000537551 EGFRP00533 1210 aa28.9■■■□□ 2.22
CHFR-215ENST00000537551 IFIT1P09914 478 aaKnown RBP28.9■■■□□ 2.22
CHFR-215ENST00000537551 ZNF280AP59817 542 aaPredicted RBP28.9■■■□□ 2.22
CHFR-215ENST00000537551 CAVIN4Q5BKX8 364 aa28.9■■■□□ 2.22
CHFR-215ENST00000537551 OGFOD1Q8N543 542 aa28.9■■■□□ 2.22
CHFR-215ENST00000537551 PGAP2Q9UHJ9 254 aa28.9■■■□□ 2.22
CHFR-215ENST00000537551 IL15P40933 162 aaPredicted RBP28.89■■■□□ 2.22
CHFR-215ENST00000537551 ZBTB7BO15156 539 aaPredicted RBP28.88■■■□□ 2.21
CHFR-215ENST00000537551 MYOZ2Q9NPC6 264 aa28.88■■■□□ 2.21
CHFR-215ENST00000537551 JAG2Q9Y219 1238 aa28.88■■■□□ 2.21
CHFR-215ENST00000537551 SASH1O94885 1247 aa28.87■■■□□ 2.21
CHFR-215ENST00000537551 SLC5A1P13866 664 aa28.87■■■□□ 2.21
CHFR-215ENST00000537551 FBXO33Q7Z6M2 555 aa28.87■■■□□ 2.21
CHFR-215ENST00000537551 KIAA0825Q8IV33 1275 aa28.87■■■□□ 2.21
CHFR-215ENST00000537551 TDRD7Q8NHU6 1098 aaKnown RBP28.87■■■□□ 2.21
CHFR-215ENST00000537551 C1orf115Q9H7X2 142 aa28.87■■■□□ 2.21
CHFR-215ENST00000537551 CREBZFQ9NS37 354 aa28.87■■■□□ 2.21
CHFR-215ENST00000537551 FRAT2O75474 233 aaPredicted RBP28.86■■■□□ 2.21
CHFR-215ENST00000537551 CDC37L1Q7L3B6 337 aa28.86■■■□□ 2.21
CHFR-215ENST00000537551 LPIN2Q92539 896 aa28.86■■■□□ 2.21
CHFR-215ENST00000537551 DCPSQ96C86 337 aaKnown RBP28.86■■■□□ 2.21
CHFR-215ENST00000537551 GLIS2Q9BZE0 524 aaPredicted RBP28.86■■■□□ 2.21
CHFR-215ENST00000537551 HDAC9Q9UKV0 1011 aa28.86■■■□□ 2.21
CHFR-215ENST00000537551 PNMA6EA0A0J9YXQ4 647 aa28.85■■■□□ 2.21
CHFR-215ENST00000537551 TMEM88BA6NKF7 163 aa28.85■■■□□ 2.21
CHFR-215ENST00000537551 TRAF5O00463 557 aa28.85■■■□□ 2.21
CHFR-215ENST00000537551 FGFR2P21802 821 aa28.85■■■□□ 2.21
CHFR-215ENST00000537551 BCAMP50895 628 aa28.84■■■□□ 2.21
CHFR-215ENST00000537551 FMR1Q06787 632 aaKnown RBP eCLIP28.84■■■□□ 2.21
CHFR-215ENST00000537551 SCARF1Q14162 830 aa28.84■■■□□ 2.21
CHFR-215ENST00000537551 ATP2B3Q16720 1220 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms