RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 TXNRD3Q86VQ6 643 aa17.32■□□□□ 0.36
TMEM258-203ENST00000535297 DNAJC5GQ8N7S2 189 aa17.32■□□□□ 0.36
TMEM258-203ENST00000535297 AGBL3Q8NEM8 1001 aa17.32■□□□□ 0.36
TMEM258-203ENST00000535297 HELBQ8NG08 1087 aaPredicted RBP17.32■□□□□ 0.36
TMEM258-203ENST00000535297 HDAC5Q9UQL6 1122 aa17.32■□□□□ 0.36
TMEM258-203ENST00000535297 SHTN1A0MZ66 631 aa17.31■□□□□ 0.36
TMEM258-203ENST00000535297 TRIM27P14373 513 aa17.31■□□□□ 0.36
TMEM258-203ENST00000535297 ATF7IPQ6VMQ6 1270 aa17.31■□□□□ 0.36
TMEM258-203ENST00000535297 TRPM4Q8TD43 1214 aa17.31■□□□□ 0.36
TMEM258-203ENST00000535297 ZC3H15Q8WU90 426 aaKnown RBP17.31■□□□□ 0.36
TMEM258-203ENST00000535297 CREBZFQ9NS37 354 aa17.31■□□□□ 0.36
TMEM258-203ENST00000535297 MROH5Q6ZUA9 1318 aa17.3■□□□□ 0.36
TMEM258-203ENST00000535297 KLRG1Q96E93 195 aa17.3■□□□□ 0.36
TMEM258-203ENST00000535297 PGAP2Q9UHJ9 254 aa17.3■□□□□ 0.36
TMEM258-203ENST00000535297 TRPM7Q96QT4 1865 aa17.29■□□□□ 0.36
TMEM258-203ENST00000535297 MYO3BQ8WXR4 1341 aa17.29■□□□□ 0.36
TMEM258-203ENST00000535297 HIRAP54198 1017 aaPredicted RBP17.29■□□□□ 0.36
TMEM258-203ENST00000535297 STRIP1Q5VSL9 837 aa17.29■□□□□ 0.36
TMEM258-203ENST00000535297 FRAT1Q92837 279 aaPredicted RBP17.29■□□□□ 0.36
TMEM258-203ENST00000535297 GMLQ99445 158 aa17.29■□□□□ 0.36
TMEM258-203ENST00000535297 PUS3Q9BZE2 481 aaKnown RBP17.29■□□□□ 0.36
TMEM258-203ENST00000535297 RIPOR2Q9Y4F9 1068 aa17.29■□□□□ 0.36
TMEM258-203ENST00000535297 SNAP23O00161 211 aa17.28■□□□□ 0.36
TMEM258-203ENST00000535297 PLIN1O60240 522 aa17.28■□□□□ 0.36
TMEM258-203ENST00000535297 ZNF280AP59817 542 aaPredicted RBP17.28■□□□□ 0.36
TMEM258-203ENST00000535297 UBE4AQ14139 1066 aa17.28■□□□□ 0.36
TMEM258-203ENST00000535297 DACT2Q5SW24 774 aa17.28■□□□□ 0.36
TMEM258-203ENST00000535297 ZKSCAN2Q63HK3 967 aa17.28■□□□□ 0.36
TMEM258-203ENST00000535297 SAMD7Q7Z3H4 446 aa17.28■□□□□ 0.36
TMEM258-203ENST00000535297 ZNF804AQ7Z570 1209 aa17.28■□□□□ 0.36
TMEM258-203ENST00000535297 MEIS3Q99687 375 aa17.28■□□□□ 0.36
TMEM258-203ENST00000535297 CD209Q9NNX6 404 aa17.28■□□□□ 0.36
TMEM258-203ENST00000535297 TMEM88BA6NKF7 163 aa17.27■□□□□ 0.36
TMEM258-203ENST00000535297 GNAI3P08754 354 aa17.27■□□□□ 0.36
TMEM258-203ENST00000535297 RFX5P48382 616 aaPredicted RBP17.27■□□□□ 0.36
TMEM258-203ENST00000535297 KIF4BQ2VIQ3 1234 aa17.27■□□□□ 0.36
TMEM258-203ENST00000535297 TBC1D10BQ4KMP7 808 aaPredicted RBP17.27■□□□□ 0.36
TMEM258-203ENST00000535297 LRRFIP2Q9Y608 721 aaKnown RBP17.27■□□□□ 0.36
TMEM258-203ENST00000535297 USP17L8P0C7I0 530 aa17.26■□□□□ 0.35
TMEM258-203ENST00000535297 IL1R1P14778 569 aa17.26■□□□□ 0.35
TMEM258-203ENST00000535297 LRRC24Q50LG9 513 aa17.26■□□□□ 0.35
TMEM258-203ENST00000535297 METTL24Q5JXM2 366 aa17.26■□□□□ 0.35
TMEM258-203ENST00000535297 KLHDC4Q8TBB5 520 aa17.26■□□□□ 0.35
TMEM258-203ENST00000535297 FBXW7Q969H0 707 aa17.26■□□□□ 0.35
TMEM258-203ENST00000535297 EGFRP00533 1210 aa17.25■□□□□ 0.35
TMEM258-203ENST00000535297 MMP14P50281 582 aa17.25■□□□□ 0.35
TMEM258-203ENST00000535297 PTPN12Q05209 780 aaKnown RBP17.25■□□□□ 0.35
TMEM258-203ENST00000535297 TTLL5Q6EMB2 1281 aa17.25■□□□□ 0.35
TMEM258-203ENST00000535297 VGLL2Q8N8G2 317 aa17.25■□□□□ 0.35
TMEM258-203ENST00000535297 FBXO3Q9UK99 471 aa17.25■□□□□ 0.35
TMEM258-203ENST00000535297 TNNQ9UQP3 1299 aa17.25■□□□□ 0.35
TMEM258-203ENST00000535297 EYA2O00167 538 aa17.24■□□□□ 0.35
TMEM258-203ENST00000535297 GTF2IP78347 998 aa17.24■□□□□ 0.35
TMEM258-203ENST00000535297 RBM26Q5T8P6 1007 aaKnown RBP17.24■□□□□ 0.35
TMEM258-203ENST00000535297 CDC37L1Q7L3B6 337 aa17.24■□□□□ 0.35
TMEM258-203ENST00000535297 JMYQ8N9B5 988 aa17.24■□□□□ 0.35
TMEM258-203ENST00000535297 CLUAP1Q96AJ1 413 aa17.24■□□□□ 0.35
TMEM258-203ENST00000535297 GLIS2Q9BZE0 524 aaPredicted RBP17.24■□□□□ 0.35
TMEM258-203ENST00000535297 TRAF5O00463 557 aa17.23■□□□□ 0.35
TMEM258-203ENST00000535297 PDE8BO95263 885 aa17.23■□□□□ 0.35
TMEM258-203ENST00000535297 MXD3Q9BW11 206 aa17.23■□□□□ 0.35
TMEM258-203ENST00000535297 MYOZ2Q9NPC6 264 aa17.23■□□□□ 0.35
TMEM258-203ENST00000535297 ARAP2Q8WZ64 1704 aa17.23■□□□□ 0.35
TMEM258-203ENST00000535297 CNTNAP1P78357 1384 aa17.23■□□□□ 0.35
TMEM258-203ENST00000535297 CIAO1O76071 339 aa17.22■□□□□ 0.35
TMEM258-203ENST00000535297 FKBP1AP62942 108 aaKnown RBP17.22■□□□□ 0.35
TMEM258-203ENST00000535297 MTX1Q13505 466 aa17.22■□□□□ 0.35
TMEM258-203ENST00000535297 FTSJ3Q8IY81 847 aaKnown RBP17.22■□□□□ 0.35
TMEM258-203ENST00000535297 OGFOD1Q8N543 542 aa17.22■□□□□ 0.35
TMEM258-203ENST00000535297 TMEM57Q8N5G2 664 aa17.22■□□□□ 0.35
TMEM258-203ENST00000535297 DCPSQ96C86 337 aaKnown RBP17.22■□□□□ 0.35
TMEM258-203ENST00000535297 POLR2AP24928 1970 aaKnown RBP17.22■□□□□ 0.35
TMEM258-203ENST00000535297 HIBADHP31937 336 aaKnown RBP17.21■□□□□ 0.35
TMEM258-203ENST00000535297 FMR1Q06787 632 aaKnown RBP eCLIP17.21■□□□□ 0.357e-9■■■□□ 17.5
TMEM258-203ENST00000535297 PUM3Q15397 648 aaKnown RBP17.21■□□□□ 0.35
TMEM258-203ENST00000535297 KRT26Q7Z3Y9 468 aa17.21■□□□□ 0.35
TMEM258-203ENST00000535297 TDRD7Q8NHU6 1098 aaKnown RBP17.21■□□□□ 0.35
TMEM258-203ENST00000535297 FAM84BQ96KN1 310 aaPredicted RBP17.21■□□□□ 0.35
TMEM258-203ENST00000535297 GGA3Q9NZ52 723 aa17.21■□□□□ 0.35
TMEM258-203ENST00000535297 HDAC9Q9UKV0 1011 aa17.21■□□□□ 0.35
TMEM258-203ENST00000535297 FAM205AQ6ZU69 1335 aa17.21■□□□□ 0.34
TMEM258-203ENST00000535297 SASH1O94885 1247 aa17.2■□□□□ 0.34
TMEM258-203ENST00000535297 GNAI2P04899 355 aa17.2■□□□□ 0.34
TMEM258-203ENST00000535297 GYG1P46976 350 aa17.2■□□□□ 0.34
TMEM258-203ENST00000535297 ATG9AQ7Z3C6 839 aa17.2■□□□□ 0.34
TMEM258-203ENST00000535297 KIAA0825Q8IV33 1275 aa17.2■□□□□ 0.34
TMEM258-203ENST00000535297 DZIP1LQ8IYY4 767 aaKnown RBP17.2■□□□□ 0.34
TMEM258-203ENST00000535297 COPRSQ9NQ92 184 aa17.2■□□□□ 0.34
TMEM258-203ENST00000535297 MKRN1Q9UHC7 482 aaKnown RBP17.2■□□□□ 0.34
TMEM258-203ENST00000535297 PITPNM2Q9BZ72 1349 aa17.2■□□□□ 0.34
TMEM258-203ENST00000535297 RASSF10A6NK89 507 aa17.19■□□□□ 0.34
TMEM258-203ENST00000535297 CELF2O95319 508 aaKnown RBP17.19■□□□□ 0.34
TMEM258-203ENST00000535297 IFIT1P09914 478 aaKnown RBP17.19■□□□□ 0.34
TMEM258-203ENST00000535297 FGFR2P21802 821 aa17.19■□□□□ 0.34
TMEM258-203ENST00000535297 IL15P40933 162 aaPredicted RBP17.19■□□□□ 0.34
TMEM258-203ENST00000535297 SCARF1Q14162 830 aa17.19■□□□□ 0.34
TMEM258-203ENST00000535297 CAVIN4Q5BKX8 364 aa17.19■□□□□ 0.34
TMEM258-203ENST00000535297 CST9Q5W186 159 aa17.19■□□□□ 0.34
TMEM258-203ENST00000535297 FBXO33Q7Z6M2 555 aa17.19■□□□□ 0.34
TMEM258-203ENST00000535297 USP48Q86UV5 1035 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms