RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 FOXO4P98177 505 aa10.81□□□□□ -0.68
SFSWAP-202ENST00000535202 CHRNDQ07001 517 aa10.81□□□□□ -0.68
SFSWAP-202ENST00000535202 IFIT5Q13325 482 aaKnown RBP10.81□□□□□ -0.68
SFSWAP-202ENST00000535202 CYP4F22Q6NT55 531 aa10.81□□□□□ -0.68
SFSWAP-202ENST00000535202 USP17L1Q7RTZ2 530 aa10.81□□□□□ -0.68
SFSWAP-202ENST00000535202 AGBL3Q8NEM8 1001 aa10.81□□□□□ -0.68
SFSWAP-202ENST00000535202 CAPNS2Q96L46 248 aa10.81□□□□□ -0.68
SFSWAP-202ENST00000535202 SRCIN1Q9C0H9 1055 aa10.81□□□□□ -0.68
SFSWAP-202ENST00000535202 LEMD3Q9Y2U8 911 aa10.81□□□□□ -0.68
SFSWAP-202ENST00000535202 ZNF609O15014 1411 aa10.81□□□□□ -0.68
SFSWAP-202ENST00000535202 ZNF646O15015 1829 aaPredicted RBP10.81□□□□□ -0.68
SFSWAP-202ENST00000535202 ZNF804BA4D1E1 1349 aa10.81□□□□□ -0.68
SFSWAP-202ENST00000535202 THSD7BQ9C0I4 1608 aa10.8□□□□□ -0.68
SFSWAP-202ENST00000535202 ADM5C9JUS6 153 aa10.8□□□□□ -0.68
SFSWAP-202ENST00000535202 ALDH1L1O75891 902 aa10.8□□□□□ -0.68
SFSWAP-202ENST00000535202 KLRK1P26718 216 aa10.8□□□□□ -0.68
SFSWAP-202ENST00000535202 ECE1P42892 770 aa10.8□□□□□ -0.68
SFSWAP-202ENST00000535202 TAF7LQ5H9L4 462 aa10.8□□□□□ -0.68
SFSWAP-202ENST00000535202 EPHA10Q5JZY3 1008 aa10.8□□□□□ -0.68
SFSWAP-202ENST00000535202 LMBR1LQ6UX01 489 aa10.8□□□□□ -0.68
SFSWAP-202ENST00000535202 DLK2Q6UY11 383 aa10.8□□□□□ -0.68
SFSWAP-202ENST00000535202 KRT26Q7Z3Y9 468 aa10.8□□□□□ -0.68
SFSWAP-202ENST00000535202 TXNRD3Q86VQ6 643 aa10.8□□□□□ -0.68
SFSWAP-202ENST00000535202 MRPL50Q8N5N7 158 aaKnown RBP10.8□□□□□ -0.68
SFSWAP-202ENST00000535202 DCPSQ96C86 337 aaKnown RBP10.8□□□□□ -0.68
SFSWAP-202ENST00000535202 GGA3Q9NZ52 723 aa10.8□□□□□ -0.68
SFSWAP-202ENST00000535202 ASTN2O75129 1339 aaPredicted RBP10.8□□□□□ -0.68
SFSWAP-202ENST00000535202 TAF5LO75529 589 aa10.79□□□□□ -0.68
SFSWAP-202ENST00000535202 USP17L8P0C7I0 530 aa10.79□□□□□ -0.68
SFSWAP-202ENST00000535202 ZNF280AP59817 542 aaPredicted RBP10.79□□□□□ -0.68
SFSWAP-202ENST00000535202 SLFN5Q08AF3 891 aa10.79□□□□□ -0.68
SFSWAP-202ENST00000535202 CCDC57Q2TAC2 916 aa10.79□□□□□ -0.68
SFSWAP-202ENST00000535202 SAPCD2Q86UD0 394 aa10.79□□□□□ -0.68
SFSWAP-202ENST00000535202 TNS4Q8IZW8 715 aa10.79□□□□□ -0.68
SFSWAP-202ENST00000535202 MXD3Q9BW11 206 aa10.79□□□□□ -0.68
SFSWAP-202ENST00000535202 COA1Q9GZY4 146 aa10.79□□□□□ -0.68
SFSWAP-202ENST00000535202 WBP1LQ9NX94 342 aa10.79□□□□□ -0.68
SFSWAP-202ENST00000535202 CCER2I3L3R5 266 aa10.78□□□□□ -0.68
SFSWAP-202ENST00000535202 CTCFP49711 727 aaPredicted RBP10.78□□□□□ -0.68
SFSWAP-202ENST00000535202 MAP2K1Q02750 393 aaPredicted RBP10.78□□□□□ -0.68
SFSWAP-202ENST00000535202 SCARF1Q14162 830 aa10.78□□□□□ -0.68
SFSWAP-202ENST00000535202 DACT2Q5SW24 774 aa10.78□□□□□ -0.68
SFSWAP-202ENST00000535202 SULF1Q8IWU6 871 aa10.78□□□□□ -0.68
SFSWAP-202ENST00000535202 HELBQ8NG08 1087 aaPredicted RBP10.78□□□□□ -0.68
SFSWAP-202ENST00000535202 SSH1Q8WYL5 1049 aa10.78□□□□□ -0.68
SFSWAP-202ENST00000535202 CDCA7LQ96GN5 454 aa10.78□□□□□ -0.68
SFSWAP-202ENST00000535202 SUCLG2Q96I99 432 aa10.78□□□□□ -0.68
SFSWAP-202ENST00000535202 ZNF594Q96JF6 807 aaPredicted RBP10.78□□□□□ -0.68
SFSWAP-202ENST00000535202 GMLQ99445 158 aa10.78□□□□□ -0.68
SFSWAP-202ENST00000535202 MYOZ2Q9NPC6 264 aa10.78□□□□□ -0.68
SFSWAP-202ENST00000535202 CNNM1Q9NRU3 951 aa10.78□□□□□ -0.68
SFSWAP-202ENST00000535202 PTPRCP08575 1304 aa10.78□□□□□ -0.68
SFSWAP-202ENST00000535202 SNAP23O00161 211 aa10.77□□□□□ -0.69
SFSWAP-202ENST00000535202 PLIN1O60240 522 aa10.77□□□□□ -0.69
SFSWAP-202ENST00000535202 AOC2O75106 756 aa10.77□□□□□ -0.69
SFSWAP-202ENST00000535202 NBPF7P0C2Y1 421 aaPredicted RBP10.77□□□□□ -0.69
SFSWAP-202ENST00000535202 STRIP1Q5VSL9 837 aa10.77□□□□□ -0.69
SFSWAP-202ENST00000535202 ANGEL2Q5VTE6 544 aaKnown RBP10.77□□□□□ -0.69
SFSWAP-202ENST00000535202 TTLL5Q6EMB2 1281 aa10.77□□□□□ -0.69
SFSWAP-202ENST00000535202 MYO3BQ8WXR4 1341 aa10.77□□□□□ -0.69
SFSWAP-202ENST00000535202 LBX1P52954 281 aa10.76□□□□□ -0.69
SFSWAP-202ENST00000535202 HUNKP57058 714 aa10.76□□□□□ -0.69
SFSWAP-202ENST00000535202 GTF2IP78347 998 aa10.76□□□□□ -0.69
SFSWAP-202ENST00000535202 LDHAL6AQ6ZMR3 332 aa10.76□□□□□ -0.69
SFSWAP-202ENST00000535202 OGFOD1Q8N543 542 aa10.76□□□□□ -0.69
SFSWAP-202ENST00000535202 C2orf69Q8N8R5 385 aa10.76□□□□□ -0.69
SFSWAP-202ENST00000535202 CDCA5Q96FF9 252 aa10.76□□□□□ -0.69
SFSWAP-202ENST00000535202 HHIPL1Q96JK4 782 aa10.76□□□□□ -0.69
SFSWAP-202ENST00000535202 BEGAINQ9BUH8 593 aa10.76□□□□□ -0.69
SFSWAP-202ENST00000535202 GBA2Q9HCG7 927 aaPredicted RBP10.76□□□□□ -0.69
SFSWAP-202ENST00000535202 CD209Q9NNX6 404 aa10.76□□□□□ -0.69
SFSWAP-202ENST00000535202 SMC4Q9NTJ3 1288 aa10.76□□□□□ -0.69
SFSWAP-202ENST00000535202 PCNTO95613 3336 aa10.76□□□□□ -0.69
SFSWAP-202ENST00000535202 CAPN15O75808 1086 aa10.75□□□□□ -0.69
SFSWAP-202ENST00000535202 HSPA8P11142 646 aaKnown RBP10.75□□□□□ -0.69
SFSWAP-202ENST00000535202 ALDH1L2Q3SY69 923 aa10.75□□□□□ -0.69
SFSWAP-202ENST00000535202 ZNF804AQ7Z570 1209 aa10.75□□□□□ -0.69
SFSWAP-202ENST00000535202 KIAA0825Q8IV33 1275 aa10.75□□□□□ -0.69
SFSWAP-202ENST00000535202 KAZALD1Q96I82 304 aa10.75□□□□□ -0.69
SFSWAP-202ENST00000535202 BICC1Q9H694 974 aaKnown RBP10.75□□□□□ -0.69
SFSWAP-202ENST00000535202 PRDM10Q9NQV6 1147 aa10.75□□□□□ -0.69
SFSWAP-202ENST00000535202 HDAC9Q9UKV0 1011 aa10.75□□□□□ -0.69
SFSWAP-202ENST00000535202 SCAF8Q9UPN6 1271 aaKnown RBP10.75□□□□□ -0.69
SFSWAP-202ENST00000535202 UTYO14607 1347 aa10.75□□□□□ -0.69
SFSWAP-202ENST00000535202 IRS2Q9Y4H2 1338 aa10.75□□□□□ -0.69
SFSWAP-202ENST00000535202 SASH1O94885 1247 aa10.74□□□□□ -0.69
SFSWAP-202ENST00000535202 MAP2K2P36507 400 aa10.74□□□□□ -0.69
SFSWAP-202ENST00000535202 NBPF9Q3BBW0 867 aa10.74□□□□□ -0.69
SFSWAP-202ENST00000535202 C15orf52Q6ZUT6 534 aaKnown RBP10.74□□□□□ -0.69
SFSWAP-202ENST00000535202 PUS3Q9BZE2 481 aaKnown RBP10.74□□□□□ -0.69
SFSWAP-202ENST00000535202 RBM19Q9Y4C8 960 aaKnown RBP10.74□□□□□ -0.69
SFSWAP-202ENST00000535202 PITPNM2Q9BZ72 1349 aa10.74□□□□□ -0.69
SFSWAP-202ENST00000535202 PAPPA2Q9BXP8 1791 aa10.73□□□□□ -0.69
SFSWAP-202ENST00000535202 WNT10BO00744 389 aa10.73□□□□□ -0.69
SFSWAP-202ENST00000535202 RGMBQ6NW40 437 aa10.73□□□□□ -0.69
SFSWAP-202ENST00000535202 TRMT2AQ8IZ69 625 aaKnown RBP10.73□□□□□ -0.69
SFSWAP-202ENST00000535202 ANKRD44Q8N8A2 993 aa10.73□□□□□ -0.69
SFSWAP-202ENST00000535202 TSKSQ9UJT2 592 aa10.73□□□□□ -0.69
SFSWAP-202ENST00000535202 JAG2Q9Y219 1238 aa10.73□□□□□ -0.69
SFSWAP-202ENST00000535202 F8W031 263 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms