RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CHMP4AQ9BY43 222 aa12.23□□□□□ -0.45
SSBP3-215ENST00000533946 C9orf78Q9NZ63 289 aaPredicted RBP12.23□□□□□ -0.45
SSBP3-215ENST00000533946 NOB1Q9ULX3 412 aaKnown RBP12.23□□□□□ -0.45
SSBP3-215ENST00000533946 UTYO14607 1347 aa12.22□□□□□ -0.45
SSBP3-215ENST00000533946 ANKRD18BA2A2Z9 1011 aa12.22□□□□□ -0.45
SSBP3-215ENST00000533946 AOC2O75106 756 aa12.22□□□□□ -0.45
SSBP3-215ENST00000533946 ALDH1L1O75891 902 aa12.22□□□□□ -0.45
SSBP3-215ENST00000533946 IGHMBP2P38935 993 aaKnown RBP12.22□□□□□ -0.45
SSBP3-215ENST00000533946 CYP4F22Q6NT55 531 aa12.22□□□□□ -0.45
SSBP3-215ENST00000533946 RSBN1LQ6PCB5 846 aaPredicted RBP12.22□□□□□ -0.45
SSBP3-215ENST00000533946 CERS5Q8N5B7 392 aa12.22□□□□□ -0.45
SSBP3-215ENST00000533946 DPF2Q92785 391 aa12.22□□□□□ -0.45
SSBP3-215ENST00000533946 FBXW7Q969H0 707 aa12.22□□□□□ -0.45
SSBP3-215ENST00000533946 ZNF408Q9H9D4 720 aa12.22□□□□□ -0.45
SSBP3-215ENST00000533946 SMC4Q9NTJ3 1288 aa12.22□□□□□ -0.45
SSBP3-215ENST00000533946 MED23Q9ULK4 1368 aa12.21□□□□□ -0.45
SSBP3-215ENST00000533946 BCAR3O75815 825 aa12.21□□□□□ -0.45
SSBP3-215ENST00000533946 CELF2O95319 508 aaKnown RBP12.21□□□□□ -0.45
SSBP3-215ENST00000533946 RARSP54136 660 aaKnown RBP12.21□□□□□ -0.45
SSBP3-215ENST00000533946 GRM1Q13255 1194 aa12.21□□□□□ -0.45
SSBP3-215ENST00000533946 IFIT5Q13325 482 aaKnown RBP12.21□□□□□ -0.45
SSBP3-215ENST00000533946 GRIK5Q16478 980 aa12.21□□□□□ -0.45
SSBP3-215ENST00000533946 NBPF9Q3BBW0 867 aa12.21□□□□□ -0.45
SSBP3-215ENST00000533946 MPHOSPH8Q99549 860 aa12.21□□□□□ -0.45
SSBP3-215ENST00000533946 USP17L3A6NCW0 530 aa12.2□□□□□ -0.46
SSBP3-215ENST00000533946 USP17L4A6NCW7 530 aa12.2□□□□□ -0.46
SSBP3-215ENST00000533946 H7C1D1 291 aa12.2□□□□□ -0.46
SSBP3-215ENST00000533946 FOXN1O15353 648 aa12.2□□□□□ -0.46
SSBP3-215ENST00000533946 HSP90B1P14625 803 aaKnown RBP12.2□□□□□ -0.46
SSBP3-215ENST00000533946 ZNF280AP59817 542 aaPredicted RBP12.2□□□□□ -0.46
SSBP3-215ENST00000533946 GTF2IP78347 998 aa12.2□□□□□ -0.46
SSBP3-215ENST00000533946 SCARF1Q14162 830 aa12.2□□□□□ -0.46
SSBP3-215ENST00000533946 KIF4BQ2VIQ3 1234 aa12.2□□□□□ -0.46
SSBP3-215ENST00000533946 MOB2Q70IA6 237 aa12.2□□□□□ -0.46
SSBP3-215ENST00000533946 USP17L1Q7RTZ2 530 aa12.2□□□□□ -0.46
SSBP3-215ENST00000533946 ABT1Q9ULW3 272 aaKnown RBP12.2□□□□□ -0.46
SSBP3-215ENST00000533946 RASSF10A6NK89 507 aa12.19□□□□□ -0.46
SSBP3-215ENST00000533946 G3V3G9 751 aa12.19□□□□□ -0.46
SSBP3-215ENST00000533946 SASH1O94885 1247 aa12.19□□□□□ -0.46
SSBP3-215ENST00000533946 GYG1P46976 350 aa12.19□□□□□ -0.46
SSBP3-215ENST00000533946 RFX5P48382 616 aaPredicted RBP12.19□□□□□ -0.46
SSBP3-215ENST00000533946 DEFB115Q30KQ5 88 aa12.19□□□□□ -0.46
SSBP3-215ENST00000533946 RABL6Q3YEC7 729 aaPredicted RBP12.19□□□□□ -0.46
SSBP3-215ENST00000533946 DCAF8Q5TAQ9 597 aa12.19□□□□□ -0.46
SSBP3-215ENST00000533946 LDHAL6AQ6ZMR3 332 aa12.19□□□□□ -0.46
SSBP3-215ENST00000533946 CD209Q9NNX6 404 aa12.19□□□□□ -0.46
SSBP3-215ENST00000533946 GGA3Q9NZ52 723 aa12.19□□□□□ -0.46
SSBP3-215ENST00000533946 FZD1Q9UP38 647 aa12.19□□□□□ -0.46
SSBP3-215ENST00000533946 RIPOR2Q9Y4F9 1068 aa12.19□□□□□ -0.46
SSBP3-215ENST00000533946 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.19□□□□□ -0.46
SSBP3-215ENST00000533946 ANGEL2Q5VTE6 544 aaKnown RBP12.18□□□□□ -0.46
SSBP3-215ENST00000533946 PODNQ7Z5L7 613 aa12.18□□□□□ -0.46
SSBP3-215ENST00000533946 KIAA0825Q8IV33 1275 aa12.18□□□□□ -0.46
SSBP3-215ENST00000533946 MEIS3Q99687 375 aa12.18□□□□□ -0.46
SSBP3-215ENST00000533946 TSKSQ9UJT2 592 aa12.18□□□□□ -0.46
SSBP3-215ENST00000533946 IQSEC3Q9UPP2 1182 aaPredicted RBP12.18□□□□□ -0.46
SSBP3-215ENST00000533946 LEMD3Q9Y2U8 911 aa12.18□□□□□ -0.46
SSBP3-215ENST00000533946 PTPRCP08575 1304 aa12.17□□□□□ -0.46
SSBP3-215ENST00000533946 WDR33Q9C0J8 1336 aaKnown RBP12.17□□□□□ -0.46
SSBP3-215ENST00000533946 F8W031 263 aaPredicted RBP12.17□□□□□ -0.46
SSBP3-215ENST00000533946 USP17L8P0C7I0 530 aa12.17□□□□□ -0.46
SSBP3-215ENST00000533946 RPS12P25398 132 aaKnown RBP12.17□□□□□ -0.46
SSBP3-215ENST00000533946 HNRNPUQ00839 825 aaKnown RBP eCLIP12.17□□□□□ -0.463e-6■□□□□ 10.4
SSBP3-215ENST00000533946 CCDC57Q2TAC2 916 aa12.17□□□□□ -0.46
SSBP3-215ENST00000533946 ALDH1L2Q3SY69 923 aa12.17□□□□□ -0.46
SSBP3-215ENST00000533946 TTLL5Q6EMB2 1281 aa12.17□□□□□ -0.46
SSBP3-215ENST00000533946 KRT26Q7Z3Y9 468 aa12.17□□□□□ -0.46
SSBP3-215ENST00000533946 SAPCD2Q86UD0 394 aa12.17□□□□□ -0.46
SSBP3-215ENST00000533946 CAPNS2Q96L46 248 aa12.17□□□□□ -0.46
SSBP3-215ENST00000533946 ANKRD2Q9GZV1 360 aa12.17□□□□□ -0.46
SSBP3-215ENST00000533946 MYOZ2Q9NPC6 264 aa12.17□□□□□ -0.46
SSBP3-215ENST00000533946 CNNM1Q9NRU3 951 aa12.17□□□□□ -0.46
SSBP3-215ENST00000533946 PA2G4Q9UQ80 394 aaKnown RBP12.17□□□□□ -0.46
SSBP3-215ENST00000533946 TLL2Q9Y6L7 1015 aa12.17□□□□□ -0.46
SSBP3-215ENST00000533946 KCNJ4P48050 445 aa12.16□□□□□ -0.46
SSBP3-215ENST00000533946 PAXIP1Q6ZW49 1069 aaPredicted RBP12.16□□□□□ -0.46
SSBP3-215ENST00000533946 CDC37L1Q7L3B6 337 aa12.16□□□□□ -0.46
SSBP3-215ENST00000533946 VGLL2Q8N8G2 317 aa12.16□□□□□ -0.46
SSBP3-215ENST00000533946 AGBL3Q8NEM8 1001 aa12.16□□□□□ -0.46
SSBP3-215ENST00000533946 ZC3H15Q8WU90 426 aaKnown RBP12.16□□□□□ -0.46
SSBP3-215ENST00000533946 FAM84BQ96KN1 310 aaPredicted RBP12.16□□□□□ -0.46
SSBP3-215ENST00000533946 COA1Q9GZY4 146 aa12.16□□□□□ -0.46
SSBP3-215ENST00000533946 ZNF609O15014 1411 aa12.15□□□□□ -0.46
SSBP3-215ENST00000533946 WNT10BO00744 389 aa12.15□□□□□ -0.46
SSBP3-215ENST00000533946 PTPN12Q05209 780 aaKnown RBP12.15□□□□□ -0.46
SSBP3-215ENST00000533946 TAF7LQ5H9L4 462 aa12.15□□□□□ -0.46
SSBP3-215ENST00000533946 STRIP1Q5VSL9 837 aa12.15□□□□□ -0.46
SSBP3-215ENST00000533946 ATG9AQ7Z3C6 839 aa12.15□□□□□ -0.46
SSBP3-215ENST00000533946 CLUAP1Q96AJ1 413 aa12.15□□□□□ -0.46
SSBP3-215ENST00000533946 CDCA5Q96FF9 252 aa12.15□□□□□ -0.46
SSBP3-215ENST00000533946 ZBED3Q96IU2 234 aaPredicted RBP12.15□□□□□ -0.46
SSBP3-215ENST00000533946 LRRFIP2Q9Y608 721 aaKnown RBP12.15□□□□□ -0.46
SSBP3-215ENST00000533946 IL1R1P14778 569 aa12.14□□□□□ -0.47
SSBP3-215ENST00000533946 C15orf52Q6ZUT6 534 aaKnown RBP12.14□□□□□ -0.47
SSBP3-215ENST00000533946 CDAN1Q8IWY9 1227 aa12.14□□□□□ -0.47
SSBP3-215ENST00000533946 SIL1Q9H173 461 aa12.14□□□□□ -0.47
SSBP3-215ENST00000533946 WBP1LQ9NX94 342 aa12.14□□□□□ -0.47
SSBP3-215ENST00000533946 THSD7BQ9C0I4 1608 aa12.13□□□□□ -0.47
SSBP3-215ENST00000533946 FAM155AB1AL88 458 aaPredicted RBP12.13□□□□□ -0.47
SSBP3-215ENST00000533946 RLBP1P12271 317 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms