RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 DCAF8Q5TAQ9 597 aa25.57■■□□□ 1.68
CCS-208ENST00000533244 PNMA8AQ86V59 439 aaPredicted RBP25.56■■□□□ 1.68
CCS-208ENST00000533244 VGLL2Q8N8G2 317 aa25.56■■□□□ 1.68
CCS-208ENST00000533244 DPF2Q92785 391 aa25.56■■□□□ 1.68
CCS-208ENST00000533244 UBE4AQ14139 1066 aa25.55■■□□□ 1.68
CCS-208ENST00000533244 LDHDQ86WU2 507 aa25.55■■□□□ 1.68
CCS-208ENST00000533244 ZBTB12Q9Y330 459 aaPredicted RBP25.55■■□□□ 1.68
CCS-208ENST00000533244 EYA2O00167 538 aa25.54■■□□□ 1.68
CCS-208ENST00000533244 GNAI2P04899 355 aa25.54■■□□□ 1.68
CCS-208ENST00000533244 RPS12P25398 132 aaKnown RBP25.54■■□□□ 1.68
CCS-208ENST00000533244 FBXO3Q9UK99 471 aa25.54■■□□□ 1.68
CCS-208ENST00000533244 PLIN1O60240 522 aa25.54■■□□□ 1.68
CCS-208ENST00000533244 CHADLQ6NUI6 762 aa25.54■■□□□ 1.68
CCS-208ENST00000533244 ADARB2Q9NS39 739 aaKnown RBP25.54■■□□□ 1.68
CCS-208ENST00000533244 ZBTB7BO15156 539 aaPredicted RBP25.53■■□□□ 1.68
CCS-208ENST00000533244 HSPA6P17066 643 aa25.53■■□□□ 1.68
CCS-208ENST00000533244 USP50Q70EL3 339 aaPredicted RBP25.53■■□□□ 1.68
CCS-208ENST00000533244 ATG9AQ7Z3C6 839 aa25.53■■□□□ 1.68
CCS-208ENST00000533244 ITPRIPQ8IWB1 547 aa25.53■■□□□ 1.68
CCS-208ENST00000533244 COPRSQ9NQ92 184 aa25.53■■□□□ 1.68
CCS-208ENST00000533244 USP17L3A6NCW0 530 aa25.52■■□□□ 1.68
CCS-208ENST00000533244 USP17L4A6NCW7 530 aa25.52■■□□□ 1.68
CCS-208ENST00000533244 CIAO1O76071 339 aa25.52■■□□□ 1.68
CCS-208ENST00000533244 PDE8BO95263 885 aa25.52■■□□□ 1.68
CCS-208ENST00000533244 MS4A1P11836 297 aa25.52■■□□□ 1.68
CCS-208ENST00000533244 EAPPQ56P03 285 aaPredicted RBP25.52■■□□□ 1.68
CCS-208ENST00000533244 METTL24Q5JXM2 366 aa25.52■■□□□ 1.68
CCS-208ENST00000533244 RSBN1LQ6PCB5 846 aaPredicted RBP25.52■■□□□ 1.68
CCS-208ENST00000533244 USP17L1Q7RTZ2 530 aa25.52■■□□□ 1.68
CCS-208ENST00000533244 PANK1Q8TE04 598 aa25.52■■□□□ 1.68
CCS-208ENST00000533244 CNOT7Q9UIV1 285 aaKnown RBP25.52■■□□□ 1.68
CCS-208ENST00000533244 GMLQ99445 158 aa25.51■■□□□ 1.67
CCS-208ENST00000533244 CD209Q9NNX6 404 aa25.51■■□□□ 1.67
CCS-208ENST00000533244 SHTN1A0MZ66 631 aa25.5■■□□□ 1.67
CCS-208ENST00000533244 DACT2Q5SW24 774 aa25.5■■□□□ 1.67
CCS-208ENST00000533244 STRIP1Q5VSL9 837 aa25.5■■□□□ 1.67
CCS-208ENST00000533244 MICALL2Q8IY33 904 aa25.5■■□□□ 1.67
CCS-208ENST00000533244 AGBL3Q8NEM8 1001 aa25.5■■□□□ 1.67
CCS-208ENST00000533244 YTHDC1Q96MU7 727 aaKnown RBP25.5■■□□□ 1.67
CCS-208ENST00000533244 SRGAP3O43295 1099 aa25.49■■□□□ 1.67
CCS-208ENST00000533244 IL1R1P14778 569 aa25.49■■□□□ 1.67
CCS-208ENST00000533244 ZNF804AQ7Z570 1209 aa25.49■■□□□ 1.67
CCS-208ENST00000533244 PA2G4Q9UQ80 394 aaKnown RBP25.49■■□□□ 1.67
CCS-208ENST00000533244 FGFR2P21802 821 aa25.48■■□□□ 1.67
CCS-208ENST00000533244 H7C1D1 291 aa25.47■■□□□ 1.67
CCS-208ENST00000533244 SIL1Q9H173 461 aa25.47■■□□□ 1.67
CCS-208ENST00000533244 PNMA6EA0A0J9YXQ4 647 aa25.46■■□□□ 1.67
CCS-208ENST00000533244 TRPM4Q8TD43 1214 aa25.46■■□□□ 1.67
CCS-208ENST00000533244 FAM84BQ96KN1 310 aaPredicted RBP25.46■■□□□ 1.67
CCS-208ENST00000533244 IL15P40933 162 aaPredicted RBP25.46■■□□□ 1.67
CCS-208ENST00000533244 HIRAP54198 1017 aaPredicted RBP25.46■■□□□ 1.67
CCS-208ENST00000533244 ZNF280AP59817 542 aaPredicted RBP25.46■■□□□ 1.67
CCS-208ENST00000533244 PUM3Q15397 648 aaKnown RBP25.46■■□□□ 1.67
CCS-208ENST00000533244 CLEC11AQ9Y240 323 aa25.46■■□□□ 1.67
CCS-208ENST00000533244 MYO3BQ8WXR4 1341 aa25.45■■□□□ 1.66
CCS-208ENST00000533244 ITGBL1O95965 494 aaPredicted RBP25.45■■□□□ 1.66
CCS-208ENST00000533244 MVPQ14764 893 aaKnown RBP25.45■■□□□ 1.66
CCS-208ENST00000533244 TTLL5Q6EMB2 1281 aa25.45■■□□□ 1.66
CCS-208ENST00000533244 PGAP2Q9UHJ9 254 aa25.45■■□□□ 1.66
CCS-208ENST00000533244 PASKQ96RG2 1323 aa25.44■■□□□ 1.66
CCS-208ENST00000533244 HIBADHP31937 336 aaKnown RBP25.44■■□□□ 1.66
CCS-208ENST00000533244 GYG1P46976 350 aa25.44■■□□□ 1.66
CCS-208ENST00000533244 GTF2IP78347 998 aa25.44■■□□□ 1.66
CCS-208ENST00000533244 POLA2Q14181 598 aa25.44■■□□□ 1.66
CCS-208ENST00000533244 FBXO33Q7Z6M2 555 aa25.44■■□□□ 1.66
CCS-208ENST00000533244 TDRD7Q8NHU6 1098 aaKnown RBP25.44■■□□□ 1.66
CCS-208ENST00000533244 C1orf115Q9H7X2 142 aa25.44■■□□□ 1.66
CCS-208ENST00000533244 EGFRP00533 1210 aa25.43■■□□□ 1.66
CCS-208ENST00000533244 ATP8B2P98198 1209 aa25.43■■□□□ 1.66
CCS-208ENST00000533244 PDE3AQ14432 1141 aa25.43■■□□□ 1.66
CCS-208ENST00000533244 MAP1SQ66K74 1059 aaPredicted RBP25.43■■□□□ 1.66
CCS-208ENST00000533244 SAMD7Q7Z3H4 446 aa25.43■■□□□ 1.66
CCS-208ENST00000533244 SSH3Q8TE77 659 aa25.43■■□□□ 1.66
CCS-208ENST00000533244 ZC3H15Q8WU90 426 aaKnown RBP25.43■■□□□ 1.66
CCS-208ENST00000533244 MXD3Q9BW11 206 aa25.43■■□□□ 1.66
CCS-208ENST00000533244 APLP1P51693 650 aa25.42■■□□□ 1.66
CCS-208ENST00000533244 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.42■■□□□ 1.66
CCS-208ENST00000533244 LPIN2Q92539 896 aa25.42■■□□□ 1.66
CCS-208ENST00000533244 CEP126Q9P2H0 1117 aa25.42■■□□□ 1.66
CCS-208ENST00000533244 DDX19BQ9UMR2 479 aa25.42■■□□□ 1.66
CCS-208ENST00000533244 SASH1O94885 1247 aa25.41■■□□□ 1.66
CCS-208ENST00000533244 USP17L8P0C7I0 530 aa25.41■■□□□ 1.66
CCS-208ENST00000533244 FKBP1AP62942 108 aaKnown RBP25.41■■□□□ 1.66
CCS-208ENST00000533244 TBC1D10BQ4KMP7 808 aaPredicted RBP25.41■■□□□ 1.66
CCS-208ENST00000533244 CNTROBQ8N137 903 aa25.41■■□□□ 1.66
CCS-208ENST00000533244 FBXW7Q969H0 707 aa25.41■■□□□ 1.66
CCS-208ENST00000533244 COG6Q9Y2V7 657 aa25.41■■□□□ 1.66
CCS-208ENST00000533244 FAM205AQ6ZU69 1335 aa25.41■■□□□ 1.66
CCS-208ENST00000533244 IFIT1P09914 478 aaKnown RBP25.4■■□□□ 1.66
CCS-208ENST00000533244 ARAP2Q8WZ64 1704 aa25.4■■□□□ 1.66
CCS-208ENST00000533244 CEP350Q5VT06 3117 aa25.4■■□□□ 1.66
CCS-208ENST00000533244 SLC5A1P13866 664 aa25.39■■□□□ 1.66
CCS-208ENST00000533244 MMP14P50281 582 aa25.39■■□□□ 1.66
CCS-208ENST00000533244 CAVIN4Q5BKX8 364 aa25.39■■□□□ 1.66
CCS-208ENST00000533244 C20orf194Q5TEA3 1177 aa25.39■■□□□ 1.66
CCS-208ENST00000533244 CERS5Q8N5B7 392 aa25.39■■□□□ 1.66
CCS-208ENST00000533244 ATP2B3Q16720 1220 aa25.38■■□□□ 1.65
CCS-208ENST00000533244 KIF4BQ2VIQ3 1234 aa25.38■■□□□ 1.65
CCS-208ENST00000533244 CEP85Q6P2H3 762 aa25.38■■□□□ 1.65
CCS-208ENST00000533244 ZBTB40Q9NUA8 1239 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms