RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 GGA3Q9NZ52 723 aa11.93□□□□□ -0.5
VPS26B-207ENST00000532160 SUPT16HQ9Y5B9 1047 aaKnown RBP11.93□□□□□ -0.5
VPS26B-207ENST00000532160 WTIPA6NIX2 430 aaPredicted RBP11.92□□□□□ -0.5
VPS26B-207ENST00000532160 FAM155AB1AL88 458 aaPredicted RBP11.92□□□□□ -0.5
VPS26B-207ENST00000532160 IGKV5-2P06315 115 aa11.92□□□□□ -0.5
VPS26B-207ENST00000532160 RGMBQ6NW40 437 aa11.92□□□□□ -0.5
VPS26B-207ENST00000532160 DCPSQ96C86 337 aaKnown RBP11.92□□□□□ -0.5
VPS26B-207ENST00000532160 MCOLN1Q9GZU1 580 aa11.92□□□□□ -0.5
VPS26B-207ENST00000532160 MAP3K2Q9Y2U5 619 aa11.92□□□□□ -0.5
VPS26B-207ENST00000532160 ZNF609O15014 1411 aa11.92□□□□□ -0.5
VPS26B-207ENST00000532160 ZNF646O15015 1829 aaPredicted RBP11.91□□□□□ -0.5
VPS26B-207ENST00000532160 G3V3G9 751 aa11.91□□□□□ -0.5
VPS26B-207ENST00000532160 BCAR3O75815 825 aa11.91□□□□□ -0.5
VPS26B-207ENST00000532160 HSP90B1P14625 803 aaKnown RBP11.91□□□□□ -0.5
VPS26B-207ENST00000532160 RARSP54136 660 aaKnown RBP11.91□□□□□ -0.5
VPS26B-207ENST00000532160 ZNF280AP59817 542 aaPredicted RBP11.91□□□□□ -0.5
VPS26B-207ENST00000532160 DCAF8Q5TAQ9 597 aa11.91□□□□□ -0.5
VPS26B-207ENST00000532160 RSBN1LQ6PCB5 846 aaPredicted RBP11.91□□□□□ -0.5
VPS26B-207ENST00000532160 ANKRD18AQ8IVF6 992 aa11.91□□□□□ -0.5
VPS26B-207ENST00000532160 MRPL50Q8N5N7 158 aaKnown RBP11.91□□□□□ -0.5
VPS26B-207ENST00000532160 C2orf69Q8N8R5 385 aa11.91□□□□□ -0.5
VPS26B-207ENST00000532160 GMLQ99445 158 aa11.91□□□□□ -0.5
VPS26B-207ENST00000532160 SMC4Q9NTJ3 1288 aa11.91□□□□□ -0.5
VPS26B-207ENST00000532160 AKAP11Q9UKA4 1901 aa11.91□□□□□ -0.5
VPS26B-207ENST00000532160 XDHP47989 1333 aa11.9□□□□□ -0.5
VPS26B-207ENST00000532160 PI4KAP2A4QPH2 592 aa11.9□□□□□ -0.5
VPS26B-207ENST00000532160 DDX58O95786 925 aaKnown RBP11.9□□□□□ -0.5
VPS26B-207ENST00000532160 CTSWP56202 376 aa11.9□□□□□ -0.5
VPS26B-207ENST00000532160 SCARF1Q14162 830 aa11.9□□□□□ -0.5
VPS26B-207ENST00000532160 ANGEL2Q5VTE6 544 aaKnown RBP11.9□□□□□ -0.5
VPS26B-207ENST00000532160 SULF1Q8IWU6 871 aa11.9□□□□□ -0.5
VPS26B-207ENST00000532160 PI4KAP1Q8N8J0 262 aa11.9□□□□□ -0.5
VPS26B-207ENST00000532160 CDCA5Q96FF9 252 aa11.9□□□□□ -0.5
VPS26B-207ENST00000532160 SCAF8Q9UPN6 1271 aaKnown RBP11.9□□□□□ -0.5
VPS26B-207ENST00000532160 CT47B1P0C2W7 299 aaPredicted RBP11.89□□□□□ -0.51
VPS26B-207ENST00000532160 ATP2B4P23634 1241 aa11.89□□□□□ -0.51
VPS26B-207ENST00000532160 ZNF157P51786 506 aaPredicted RBP11.89□□□□□ -0.51
VPS26B-207ENST00000532160 KIF23Q02241 960 aaPredicted RBP11.89□□□□□ -0.51
VPS26B-207ENST00000532160 CWF19L2Q2TBE0 894 aaKnown RBP11.89□□□□□ -0.51
VPS26B-207ENST00000532160 KSR2Q6VAB6 950 aa11.89□□□□□ -0.51
VPS26B-207ENST00000532160 AGBL3Q8NEM8 1001 aa11.89□□□□□ -0.51
VPS26B-207ENST00000532160 TTLL11Q8NHH1 800 aa11.89□□□□□ -0.51
VPS26B-207ENST00000532160 GREM2Q9H772 168 aa11.89□□□□□ -0.51
VPS26B-207ENST00000532160 PAPPA2Q9BXP8 1791 aa11.88□□□□□ -0.51
VPS26B-207ENST00000532160 USP17L3A6NCW0 530 aa11.88□□□□□ -0.51
VPS26B-207ENST00000532160 USP17L4A6NCW7 530 aa11.88□□□□□ -0.51
VPS26B-207ENST00000532160 SLC10A3P09131 477 aa11.88□□□□□ -0.51
VPS26B-207ENST00000532160 FLIIQ13045 1269 aa11.88□□□□□ -0.51
VPS26B-207ENST00000532160 DGKZQ13574 1117 aa11.88□□□□□ -0.51
VPS26B-207ENST00000532160 ALDH1L2Q3SY69 923 aa11.88□□□□□ -0.51
VPS26B-207ENST00000532160 USP17L1Q7RTZ2 530 aa11.88□□□□□ -0.51
VPS26B-207ENST00000532160 CCDC102AQ96A19 550 aa11.88□□□□□ -0.51
VPS26B-207ENST00000532160 CDC5LQ99459 802 aaKnown RBP11.88□□□□□ -0.51
VPS26B-207ENST00000532160 MXD3Q9BW11 206 aa11.88□□□□□ -0.51
VPS26B-207ENST00000532160 MYOZ2Q9NPC6 264 aa11.88□□□□□ -0.51
VPS26B-207ENST00000532160 RCAN3Q9UKA8 241 aa11.88□□□□□ -0.51
VPS26B-207ENST00000532160 MINPP1Q9UNW1 487 aa11.88□□□□□ -0.51
VPS26B-207ENST00000532160 TNRC18O15417 2968 aaPredicted RBP11.88□□□□□ -0.51
VPS26B-207ENST00000532160 NEURL1BA8MQ27 555 aa11.87□□□□□ -0.51
VPS26B-207ENST00000532160 USP17L8P0C7I0 530 aa11.87□□□□□ -0.51
VPS26B-207ENST00000532160 RGS19P49795 217 aa11.87□□□□□ -0.51
VPS26B-207ENST00000532160 FKBP5Q13451 457 aaPredicted RBP11.87□□□□□ -0.51
VPS26B-207ENST00000532160 PODNQ7Z5L7 613 aa11.87□□□□□ -0.51
VPS26B-207ENST00000532160 RASAL3Q86YV0 1011 aa11.87□□□□□ -0.51
VPS26B-207ENST00000532160 FRAT1Q92837 279 aaPredicted RBP11.87□□□□□ -0.51
VPS26B-207ENST00000532160 CHMP4AQ9BY43 222 aa11.87□□□□□ -0.51
VPS26B-207ENST00000532160 BSDC1Q9NW68 430 aaPredicted RBP11.87□□□□□ -0.51
VPS26B-207ENST00000532160 SAGE1Q9NXZ1 904 aa11.87□□□□□ -0.51
VPS26B-207ENST00000532160 NOB1Q9ULX3 412 aaKnown RBP11.87□□□□□ -0.51
VPS26B-207ENST00000532160 TNNQ9UQP3 1299 aa11.87□□□□□ -0.51
VPS26B-207ENST00000532160 MED23Q9ULK4 1368 aa11.87□□□□□ -0.51
VPS26B-207ENST00000532160 PDE4DIPQ5VU43 2346 aa11.86□□□□□ -0.51
VPS26B-207ENST00000532160 F6X3S4 739 aa11.86□□□□□ -0.51
VPS26B-207ENST00000532160 TRPA1O75762 1119 aa11.86□□□□□ -0.51
VPS26B-207ENST00000532160 KLRK1P26718 216 aa11.86□□□□□ -0.51
VPS26B-207ENST00000532160 MLLT1Q03111 559 aaPredicted RBP11.86□□□□□ -0.51
VPS26B-207ENST00000532160 NEXNQ0ZGT2 675 aa11.86□□□□□ -0.51
VPS26B-207ENST00000532160 DACT2Q5SW24 774 aa11.86□□□□□ -0.51
VPS26B-207ENST00000532160 PRAMEF18Q5VWM3 479 aa11.86□□□□□ -0.51
VPS26B-207ENST00000532160 MOB2Q70IA6 237 aa11.86□□□□□ -0.51
VPS26B-207ENST00000532160 UBE3BQ7Z3V4 1068 aa11.86□□□□□ -0.51
VPS26B-207ENST00000532160 TXNRD3Q86VQ6 643 aa11.86□□□□□ -0.51
VPS26B-207ENST00000532160 CSRNP1Q96S65 589 aa11.86□□□□□ -0.51
VPS26B-207ENST00000532160 RNF186Q9NXI6 227 aa11.86□□□□□ -0.51
VPS26B-207ENST00000532160 PITPNM2Q9BZ72 1349 aa11.86□□□□□ -0.51
VPS26B-207ENST00000532160 H7C1W4 665 aa11.85□□□□□ -0.51
VPS26B-207ENST00000532160 PLIN1O60240 522 aa11.85□□□□□ -0.51
VPS26B-207ENST00000532160 CCT4P50991 539 aaKnown RBP11.85□□□□□ -0.51
VPS26B-207ENST00000532160 NBPF9Q3BBW0 867 aa11.85□□□□□ -0.51
VPS26B-207ENST00000532160 FBXW7Q969H0 707 aa11.85□□□□□ -0.51
VPS26B-207ENST00000532160 CASP7P55210 303 aa11.84□□□□□ -0.51
VPS26B-207ENST00000532160 GCKRQ14397 625 aa11.84□□□□□ -0.51
VPS26B-207ENST00000532160 CACNA1FO60840 1977 aa11.84□□□□□ -0.51
VPS26B-207ENST00000532160 A0A1B0GUL6 1792 aa11.83□□□□□ -0.52
VPS26B-207ENST00000532160 WNT10BO00744 389 aa11.83□□□□□ -0.52
VPS26B-207ENST00000532160 ITGA6P23229 1130 aa11.83□□□□□ -0.52
VPS26B-207ENST00000532160 IGHMBP2P38935 993 aaKnown RBP11.83□□□□□ -0.52
VPS26B-207ENST00000532160 FKBP1BP68106 108 aa11.83□□□□□ -0.52
VPS26B-207ENST00000532160 SLC4A10Q6U841 1118 aa11.83□□□□□ -0.52
VPS26B-207ENST00000532160 CLUAP1Q96AJ1 413 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 243.4 ms