RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 KIAA2012Q0VF49 1180 aa20.87■□□□□ 0.93
SF3B2-211ENST00000531041 GPR101Q96P66 508 aaPredicted RBP20.87■□□□□ 0.93
SF3B2-211ENST00000531041 ZC3H12CQ9C0D7 883 aaKnown RBP20.87■□□□□ 0.93
SF3B2-211ENST00000531041 ZNF277Q9NRM2 450 aaPredicted RBP20.87■□□□□ 0.93
SF3B2-211ENST00000531041 TIAM2Q8IVF5 1701 aa20.87■□□□□ 0.93
SF3B2-211ENST00000531041 A0A1B0GUL7 405 aa20.87■□□□□ 0.93
SF3B2-211ENST00000531041 IFIT1P09914 478 aaKnown RBP20.87■□□□□ 0.93
SF3B2-211ENST00000531041 SLC5A1P13866 664 aa20.87■□□□□ 0.93
SF3B2-211ENST00000531041 LMNB1P20700 586 aa20.87■□□□□ 0.93
SF3B2-211ENST00000531041 IARSP41252 1262 aaKnown RBP20.87■□□□□ 0.93
SF3B2-211ENST00000531041 PRELPP51888 382 aa20.87■□□□□ 0.93
SF3B2-211ENST00000531041 TNNI3KQ59H18 835 aa20.87■□□□□ 0.93
SF3B2-211ENST00000531041 FPGT-TNNI3KV9GXZ4 949 aa20.87■□□□□ 0.93
SF3B2-211ENST00000531041 PPIP5K2O43314 1243 aa20.86■□□□□ 0.93
SF3B2-211ENST00000531041 TIMM10P62072 90 aa20.86■□□□□ 0.93
SF3B2-211ENST00000531041 TXNRD3Q86VQ6 643 aa20.86■□□□□ 0.93
SF3B2-211ENST00000531041 IL1RAPL2Q9NP60 686 aa20.86■□□□□ 0.93
SF3B2-211ENST00000531041 UTRNP46939 3433 aa20.85■□□□□ 0.93
SF3B2-211ENST00000531041 COL4A5P29400 1685 aa20.85■□□□□ 0.93
SF3B2-211ENST00000531041 RIMBP2O15034 1052 aa20.85■□□□□ 0.93
SF3B2-211ENST00000531041 KLRK1P26718 216 aa20.85■□□□□ 0.93
SF3B2-211ENST00000531041 AOC3Q16853 763 aa20.85■□□□□ 0.93
SF3B2-211ENST00000531041 CLASRPQ8N2M8 674 aaKnown RBP20.85■□□□□ 0.93
SF3B2-211ENST00000531041 CCDC136Q96JN2 1154 aa20.85■□□□□ 0.93
SF3B2-211ENST00000531041 PPP4R2Q9NY27 417 aa20.85■□□□□ 0.93
SF3B2-211ENST00000531041 SCN9AQ15858 1988 aa20.85■□□□□ 0.93
SF3B2-211ENST00000531041 LARGE2Q8N3Y3 721 aa20.84■□□□□ 0.93
SF3B2-211ENST00000531041 EAF2Q96CJ1 260 aaPredicted RBP20.84■□□□□ 0.93
SF3B2-211ENST00000531041 NEUROD6Q96NK8 337 aa20.83■□□□□ 0.93
SF3B2-211ENST00000531041 ZNF646O15015 1829 aaPredicted RBP20.83■□□□□ 0.92
SF3B2-211ENST00000531041 KDM2BQ8NHM5 1336 aa20.83■□□□□ 0.92
SF3B2-211ENST00000531041 SMARCA5O60264 1052 aaPredicted RBP20.82■□□□□ 0.92
SF3B2-211ENST00000531041 CAVIN4Q5BKX8 364 aa20.82■□□□□ 0.92
SF3B2-211ENST00000531041 ANKRD45Q5TZF3 282 aa20.82■□□□□ 0.92
SF3B2-211ENST00000531041 FBXO33Q7Z6M2 555 aa20.82■□□□□ 0.92
SF3B2-211ENST00000531041 XAGE2Q96GT9 111 aa20.82■□□□□ 0.92
SF3B2-211ENST00000531041 FAM84BQ96KN1 310 aaPredicted RBP20.82■□□□□ 0.92
SF3B2-211ENST00000531041 AKAP11Q9UKA4 1901 aa20.81■□□□□ 0.92
SF3B2-211ENST00000531041 HIBADHP31937 336 aaKnown RBP20.81■□□□□ 0.92
SF3B2-211ENST00000531041 GYG1P46976 350 aa20.81■□□□□ 0.92
SF3B2-211ENST00000531041 ZNF804AQ7Z570 1209 aa20.81■□□□□ 0.92
SF3B2-211ENST00000531041 AACSQ86V21 672 aa20.81■□□□□ 0.92
SF3B2-211ENST00000531041 COA1Q9GZY4 146 aa20.81■□□□□ 0.92
SF3B2-211ENST00000531041 ADORA1P30542 326 aa20.8■□□□□ 0.92
SF3B2-211ENST00000531041 CENPQQ7L2Z9 268 aaPredicted RBP20.8■□□□□ 0.92
SF3B2-211ENST00000531041 NIM1KQ8IY84 436 aa20.8■□□□□ 0.92
SF3B2-211ENST00000531041 JDP2Q8WYK2 163 aa20.8■□□□□ 0.92
SF3B2-211ENST00000531041 RNF181Q9P0P0 153 aa20.8■□□□□ 0.92
SF3B2-211ENST00000531041 ZBTB47Q9UFB7 747 aaPredicted RBP20.8■□□□□ 0.92
SF3B2-211ENST00000531041 G3V3G9 751 aa20.79■□□□□ 0.92
SF3B2-211ENST00000531041 BCAMP50895 628 aa20.79■□□□□ 0.92
SF3B2-211ENST00000531041 NUCB1Q02818 461 aa20.79■□□□□ 0.92
SF3B2-211ENST00000531041 DOK7Q18PE1 504 aa20.79■□□□□ 0.92
SF3B2-211ENST00000531041 DCAF8Q5TAQ9 597 aa20.79■□□□□ 0.92
SF3B2-211ENST00000531041 C9orf131Q5VYM1 1079 aa20.79■□□□□ 0.92
SF3B2-211ENST00000531041 B4GALNT3Q6L9W6 998 aa20.79■□□□□ 0.92
SF3B2-211ENST00000531041 PODNQ7Z5L7 613 aa20.79■□□□□ 0.92
SF3B2-211ENST00000531041 DBNDD2Q9BQY9 259 aa20.79■□□□□ 0.92
SF3B2-211ENST00000531041 CCDC8Q9H0W5 538 aaPredicted RBP20.79■□□□□ 0.92
SF3B2-211ENST00000531041 CD209Q9NNX6 404 aa20.79■□□□□ 0.92
SF3B2-211ENST00000531041 DBNLQ9UJU6 430 aaKnown RBP20.79■□□□□ 0.92
SF3B2-211ENST00000531041 ECE2O60344 883 aa20.78■□□□□ 0.92
SF3B2-211ENST00000531041 IFIT2P09913 472 aaKnown RBP20.78■□□□□ 0.92
SF3B2-211ENST00000531041 IL1R1P14778 569 aa20.78■□□□□ 0.92
SF3B2-211ENST00000531041 VPS37DQ86XT2 251 aa20.78■□□□□ 0.92
SF3B2-211ENST00000531041 DBNDD1Q9H9R9 158 aa20.78■□□□□ 0.92
SF3B2-211ENST00000531041 ZNRF3Q9ULT6 936 aa20.78■□□□□ 0.92
SF3B2-211ENST00000531041 ZBTB22O15209 634 aa20.78■□□□□ 0.92
SF3B2-211ENST00000531041 GORABQ5T7V8 394 aa20.78■□□□□ 0.92
SF3B2-211ENST00000531041 CCDC102BQ68D86 513 aa20.78■□□□□ 0.92
SF3B2-211ENST00000531041 CHD1LQ86WJ1 897 aa20.78■□□□□ 0.92
SF3B2-211ENST00000531041 TLR7Q9NYK1 1049 aaKnown RBP20.78■□□□□ 0.92
SF3B2-211ENST00000531041 FZD9O00144 591 aa20.77■□□□□ 0.91
SF3B2-211ENST00000531041 PHKA1P46020 1223 aa20.77■□□□□ 0.91
SF3B2-211ENST00000531041 TDRD7Q8NHU6 1098 aaKnown RBP20.77■□□□□ 0.91
SF3B2-211ENST00000531041 BCL11AQ9H165 835 aa20.77■□□□□ 0.91
SF3B2-211ENST00000531041 ZC3H4Q9UPT8 1303 aaKnown RBP20.76■□□□□ 0.91
SF3B2-211ENST00000531041 YDJCA8MPS7 323 aa20.76■□□□□ 0.91
SF3B2-211ENST00000531041 CCDC158Q5M9N0 1113 aa20.76■□□□□ 0.91
SF3B2-211ENST00000531041 LNPKQ9C0E8 428 aa20.76■□□□□ 0.91
SF3B2-211ENST00000531041 GNL3LQ9NVN8 582 aaKnown RBP20.76■□□□□ 0.91
SF3B2-211ENST00000531041 ZNF512BQ96KM6 892 aaPredicted RBP20.75■□□□□ 0.91
SF3B2-211ENST00000531041 MYO5AQ9Y4I1 1855 aaKnown RBP20.75■□□□□ 0.91
SF3B2-211ENST00000531041 ARID4AP29374 1257 aaPredicted RBP20.74■□□□□ 0.91
SF3B2-211ENST00000531041 C16orf71Q8IYS4 520 aaPredicted RBP20.74■□□□□ 0.91
SF3B2-211ENST00000531041 SALL3Q9BXA9 1300 aa20.73■□□□□ 0.91
SF3B2-211ENST00000531041 SEMA3EO15041 775 aa20.73■□□□□ 0.91
SF3B2-211ENST00000531041 UQCRFS1P1P0C7P4 283 aa20.73■□□□□ 0.91
SF3B2-211ENST00000531041 KCNQ5Q9NR82 932 aa20.73■□□□□ 0.91
SF3B2-211ENST00000531041 FRAT2O75474 233 aaPredicted RBP20.72■□□□□ 0.91
SF3B2-211ENST00000531041 EIF6P56537 245 aaKnown RBP20.72■□□□□ 0.91
SF3B2-211ENST00000531041 CXCL9Q07325 125 aa20.72■□□□□ 0.91
SF3B2-211ENST00000531041 TTC39AQ5SRH9 613 aa20.72■□□□□ 0.91
SF3B2-211ENST00000531041 IQSEC3Q9UPP2 1182 aaPredicted RBP20.72■□□□□ 0.91
SF3B2-211ENST00000531041 FAM205AQ6ZU69 1335 aa20.72■□□□□ 0.91
SF3B2-211ENST00000531041 DENND2AQ9ULE3 1009 aa20.71■□□□□ 0.91
SF3B2-211ENST00000531041 PDS5AQ29RF7 1337 aaKnown RBP20.71■□□□□ 0.91
SF3B2-211ENST00000531041 COL1A1P02452 1464 aaPredicted RBP20.7■□□□□ 0.9
SF3B2-211ENST00000531041 USP17L3A6NCW0 530 aa20.7■□□□□ 0.9
SF3B2-211ENST00000531041 USP17L4A6NCW7 530 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms