RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 PLIN1O60240 522 aa21.1■□□□□ 0.97
SF3B2-209ENST00000530322 LRRC24Q50LG9 513 aa21.1■□□□□ 0.97
SF3B2-209ENST00000530322 ADARB2Q9NS39 739 aaKnown RBP21.1■□□□□ 0.97
SF3B2-209ENST00000530322 MROH5Q6ZUA9 1318 aa21.09■□□□□ 0.97
SF3B2-209ENST00000530322 RPS12P25398 132 aaKnown RBP21.09■□□□□ 0.97
SF3B2-209ENST00000530322 PTPN12Q05209 780 aaKnown RBP21.09■□□□□ 0.97
SF3B2-209ENST00000530322 USP50Q70EL3 339 aaPredicted RBP21.09■□□□□ 0.97
SF3B2-209ENST00000530322 DZIP1LQ8IYY4 767 aaKnown RBP21.09■□□□□ 0.97
SF3B2-209ENST00000530322 CNOT7Q9UIV1 285 aaKnown RBP21.09■□□□□ 0.97
SF3B2-209ENST00000530322 ZNF609O15014 1411 aa21.09■□□□□ 0.97
SF3B2-209ENST00000530322 SHTN1A0MZ66 631 aa21.08■□□□□ 0.97
SF3B2-209ENST00000530322 RLBP1P12271 317 aa21.08■□□□□ 0.97
SF3B2-209ENST00000530322 FTSJ3Q8IY81 847 aaKnown RBP21.08■□□□□ 0.97
SF3B2-209ENST00000530322 USP17L3A6NCW0 530 aa21.07■□□□□ 0.96
SF3B2-209ENST00000530322 USP17L4A6NCW7 530 aa21.07■□□□□ 0.96
SF3B2-209ENST00000530322 UBE4AQ14139 1066 aa21.07■□□□□ 0.96
SF3B2-209ENST00000530322 RSBN1LQ6PCB5 846 aaPredicted RBP21.07■□□□□ 0.96
SF3B2-209ENST00000530322 USP17L1Q7RTZ2 530 aa21.07■□□□□ 0.96
SF3B2-209ENST00000530322 MICALL2Q8IY33 904 aa21.07■□□□□ 0.96
SF3B2-209ENST00000530322 RCAN3Q9UKA8 241 aa21.07■□□□□ 0.96
SF3B2-209ENST00000530322 CLEC11AQ9Y240 323 aa21.07■□□□□ 0.96
SF3B2-209ENST00000530322 APLP1P51693 650 aa21.06■□□□□ 0.96
SF3B2-209ENST00000530322 VGLL2Q8N8G2 317 aa21.06■□□□□ 0.96
SF3B2-209ENST00000530322 CD209Q9NNX6 404 aa21.06■□□□□ 0.96
SF3B2-209ENST00000530322 H7C1D1 291 aa21.05■□□□□ 0.96
SF3B2-209ENST00000530322 EYA2O00167 538 aa21.05■□□□□ 0.96
SF3B2-209ENST00000530322 MTX1Q13505 466 aa21.05■□□□□ 0.96
SF3B2-209ENST00000530322 METTL24Q5JXM2 366 aa21.05■□□□□ 0.96
SF3B2-209ENST00000530322 AGBL3Q8NEM8 1001 aa21.05■□□□□ 0.96
SF3B2-209ENST00000530322 GMLQ99445 158 aa21.05■□□□□ 0.96
SF3B2-209ENST00000530322 PDE8BO95263 885 aa21.04■□□□□ 0.96
SF3B2-209ENST00000530322 ITGBL1O95965 494 aaPredicted RBP21.04■□□□□ 0.96
SF3B2-209ENST00000530322 GNAI2P04899 355 aa21.04■□□□□ 0.96
SF3B2-209ENST00000530322 HIRAP54198 1017 aaPredicted RBP21.04■□□□□ 0.96
SF3B2-209ENST00000530322 DACT2Q5SW24 774 aa21.04■□□□□ 0.96
SF3B2-209ENST00000530322 STRIP1Q5VSL9 837 aa21.04■□□□□ 0.96
SF3B2-209ENST00000530322 ATG9AQ7Z3C6 839 aa21.04■□□□□ 0.96
SF3B2-209ENST00000530322 ZNF804AQ7Z570 1209 aa21.04■□□□□ 0.96
SF3B2-209ENST00000530322 TRPM4Q8TD43 1214 aa21.04■□□□□ 0.96
SF3B2-209ENST00000530322 FBXO3Q9UK99 471 aa21.04■□□□□ 0.96
SF3B2-209ENST00000530322 MAP1SQ66K74 1059 aaPredicted RBP21.03■□□□□ 0.96
SF3B2-209ENST00000530322 ITPRIPQ8IWB1 547 aa21.03■□□□□ 0.96
SF3B2-209ENST00000530322 CNTROBQ8N137 903 aa21.03■□□□□ 0.96
SF3B2-209ENST00000530322 PASKQ96RG2 1323 aa21.03■□□□□ 0.96
SF3B2-209ENST00000530322 ZBTB7BO15156 539 aaPredicted RBP21.02■□□□□ 0.96
SF3B2-209ENST00000530322 CIAO1O76071 339 aa21.02■□□□□ 0.96
SF3B2-209ENST00000530322 IL1R1P14778 569 aa21.02■□□□□ 0.96
SF3B2-209ENST00000530322 TTLL5Q6EMB2 1281 aa21.02■□□□□ 0.96
SF3B2-209ENST00000530322 SAMD7Q7Z3H4 446 aa21.02■□□□□ 0.96
SF3B2-209ENST00000530322 PANK1Q8TE04 598 aa21.02■□□□□ 0.96
SF3B2-209ENST00000530322 SIL1Q9H173 461 aa21.02■□□□□ 0.96
SF3B2-209ENST00000530322 COPRSQ9NQ92 184 aa21.02■□□□□ 0.96
SF3B2-209ENST00000530322 PGAP2Q9UHJ9 254 aa21.02■□□□□ 0.96
SF3B2-209ENST00000530322 PA2G4Q9UQ80 394 aaKnown RBP21.02■□□□□ 0.96
SF3B2-209ENST00000530322 SRGAP3O43295 1099 aa21.01■□□□□ 0.95
SF3B2-209ENST00000530322 EGFRP00533 1210 aa21.01■□□□□ 0.95
SF3B2-209ENST00000530322 ZNF280AP59817 542 aaPredicted RBP21.01■□□□□ 0.95
SF3B2-209ENST00000530322 GTF2IP78347 998 aa21.01■□□□□ 0.95
SF3B2-209ENST00000530322 FBXW7Q969H0 707 aa21.01■□□□□ 0.95
SF3B2-209ENST00000530322 FAM84BQ96KN1 310 aaPredicted RBP21.01■□□□□ 0.95
SF3B2-209ENST00000530322 MXD3Q9BW11 206 aa21.01■□□□□ 0.95
SF3B2-209ENST00000530322 FGFR2P21802 821 aa21■□□□□ 0.95
SF3B2-209ENST00000530322 GYG1P46976 350 aa21■□□□□ 0.95
SF3B2-209ENST00000530322 TBC1D10BQ4KMP7 808 aaPredicted RBP21■□□□□ 0.95
SF3B2-209ENST00000530322 ZC3H15Q8WU90 426 aaKnown RBP21■□□□□ 0.95
SF3B2-209ENST00000530322 MYO3BQ8WXR4 1341 aa21■□□□□ 0.95
SF3B2-209ENST00000530322 USP17L8P0C7I0 530 aa20.99■□□□□ 0.95
SF3B2-209ENST00000530322 MS4A1P11836 297 aa20.99■□□□□ 0.95
SF3B2-209ENST00000530322 HIBADHP31937 336 aaKnown RBP20.99■□□□□ 0.95
SF3B2-209ENST00000530322 HTRA3P83110 453 aa20.99■□□□□ 0.95
SF3B2-209ENST00000530322 PUM3Q15397 648 aaKnown RBP20.99■□□□□ 0.95
SF3B2-209ENST00000530322 POLR2AP24928 1970 aaKnown RBP20.98■□□□□ 0.95
SF3B2-209ENST00000530322 PNMA6EA0A0J9YXQ4 647 aa20.98■□□□□ 0.95
SF3B2-209ENST00000530322 KIF4BQ2VIQ3 1234 aa20.98■□□□□ 0.95
SF3B2-209ENST00000530322 RBM26Q5T8P6 1007 aaKnown RBP20.98■□□□□ 0.95
SF3B2-209ENST00000530322 FBXO33Q7Z6M2 555 aa20.98■□□□□ 0.95
SF3B2-209ENST00000530322 TDRD7Q8NHU6 1098 aaKnown RBP20.98■□□□□ 0.95
SF3B2-209ENST00000530322 YTHDC1Q96MU7 727 aaKnown RBP20.98■□□□□ 0.95
SF3B2-209ENST00000530322 IL15P40933 162 aaPredicted RBP20.97■□□□□ 0.95
SF3B2-209ENST00000530322 CEP126Q9P2H0 1117 aa20.97■□□□□ 0.95
SF3B2-209ENST00000530322 SASH1O94885 1247 aa20.96■□□□□ 0.95
SF3B2-209ENST00000530322 IFIT1P09914 478 aaKnown RBP20.96■□□□□ 0.95
SF3B2-209ENST00000530322 CAVIN4Q5BKX8 364 aa20.96■□□□□ 0.95
SF3B2-209ENST00000530322 CERS5Q8N5B7 392 aa20.96■□□□□ 0.95
SF3B2-209ENST00000530322 DNAJC5GQ8N7S2 189 aa20.96■□□□□ 0.95
SF3B2-209ENST00000530322 LPIN2Q92539 896 aa20.96■□□□□ 0.95
SF3B2-209ENST00000530322 C1orf115Q9H7X2 142 aa20.96■□□□□ 0.95
SF3B2-209ENST00000530322 MYOZ2Q9NPC6 264 aa20.96■□□□□ 0.95
SF3B2-209ENST00000530322 TRPM7Q96QT4 1865 aa20.96■□□□□ 0.95
SF3B2-209ENST00000530322 FKBP1AP62942 108 aaKnown RBP20.95■□□□□ 0.94
SF3B2-209ENST00000530322 FAM205AQ6ZU69 1335 aa20.95■□□□□ 0.94
SF3B2-209ENST00000530322 SLC5A1P13866 664 aa20.94■□□□□ 0.94
SF3B2-209ENST00000530322 MMP14P50281 582 aa20.94■□□□□ 0.94
SF3B2-209ENST00000530322 BCAMP50895 628 aa20.94■□□□□ 0.94
SF3B2-209ENST00000530322 ATP8B2P98198 1209 aa20.94■□□□□ 0.94
SF3B2-209ENST00000530322 FMR1Q06787 632 aaKnown RBP eCLIP20.94■□□□□ 0.943e-7■■□□□ 12.4
SF3B2-209ENST00000530322 POLA2Q14181 598 aa20.94■□□□□ 0.94
SF3B2-209ENST00000530322 MVPQ14764 893 aaKnown RBP20.94■□□□□ 0.94
SF3B2-209ENST00000530322 VPS37DQ86XT2 251 aa20.94■□□□□ 0.94
SF3B2-209ENST00000530322 OGFOD1Q8N543 542 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms