RNA–Protein interactions for RNA: ENST00000530267.5

USP35-204, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2 BASIC

Gene USP35, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-204ENST00000530267 ALDH8A1Q9H2A2 487 aaPredicted RBP17.98■□□□□ 0.47
USP35-204ENST00000530267 SNAP23O00161 211 aa17.98■□□□□ 0.47
USP35-204ENST00000530267 ITPK1Q13572 414 aa17.98■□□□□ 0.47
USP35-204ENST00000530267 TRIM44Q96DX7 344 aaPredicted RBP17.98■□□□□ 0.47
USP35-204ENST00000530267 PUS7LQ9H0K6 701 aaKnown RBP17.98■□□□□ 0.47
USP35-204ENST00000530267 CCDC87Q9NVE4 849 aa17.98■□□□□ 0.47
USP35-204ENST00000530267 COL22A1Q8NFW1 1626 aaPredicted RBP17.97■□□□□ 0.47
USP35-204ENST00000530267 PLCH1Q4KWH8 1693 aa17.97■□□□□ 0.47
USP35-204ENST00000530267 ERVV-1B6SEH8 477 aa17.97■□□□□ 0.47
USP35-204ENST00000530267 E7EWF7 191 aa17.97■□□□□ 0.47
USP35-204ENST00000530267 EIF5P55010 431 aaKnown RBP17.97■□□□□ 0.47
USP35-204ENST00000530267 KCNQ4P56696 695 aa17.97■□□□□ 0.47
USP35-204ENST00000530267 ZNF34Q8IZ26 560 aa17.97■□□□□ 0.47
USP35-204ENST00000530267 FOSBP53539 338 aa17.97■□□□□ 0.47
USP35-204ENST00000530267 APOBRQ0VD83 1088 aa17.97■□□□□ 0.47
USP35-204ENST00000530267 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.97■□□□□ 0.47
USP35-204ENST00000530267 GTF3C6Q969F1 213 aa17.97■□□□□ 0.47
USP35-204ENST00000530267 DHX32Q7L7V1 743 aaKnown RBP17.96■□□□□ 0.47
USP35-204ENST00000530267 SYAP1Q96A49 352 aaPredicted RBP17.96■□□□□ 0.47
USP35-204ENST00000530267 CDCA7Q9BWT1 371 aaPredicted RBP17.96■□□□□ 0.47
USP35-204ENST00000530267 TMEM87AQ8NBN3 555 aa17.96■□□□□ 0.46
USP35-204ENST00000530267 PHLPP1O60346 1717 aa17.95■□□□□ 0.46
USP35-204ENST00000530267 CCT2P78371 535 aaKnown RBP17.95■□□□□ 0.46
USP35-204ENST00000530267 SCRN1Q12765 414 aa17.95■□□□□ 0.46
USP35-204ENST00000530267 SEC31BQ9NQW1 1179 aa17.95■□□□□ 0.46
USP35-204ENST00000530267 SPATA31A5Q5VU36 1347 aa17.95■□□□□ 0.46
USP35-204ENST00000530267 SPATA31A7Q8IWB4 1347 aa17.95■□□□□ 0.46
USP35-204ENST00000530267 FOXP2O15409 715 aa17.94■□□□□ 0.46
USP35-204ENST00000530267 PDE8BO95263 885 aa17.94■□□□□ 0.46
USP35-204ENST00000530267 PDCP20941 246 aa17.94■□□□□ 0.46
USP35-204ENST00000530267 PHKA1P46020 1223 aa17.94■□□□□ 0.46
USP35-204ENST00000530267 UBE2HP62256 183 aa17.94■□□□□ 0.46
USP35-204ENST00000530267 VGLL2Q8N8G2 317 aa17.94■□□□□ 0.46
USP35-204ENST00000530267 THRAP3Q9Y2W1 955 aaKnown RBP17.94■□□□□ 0.46
USP35-204ENST00000530267 MYH3P11055 1940 aa17.94■□□□□ 0.46
USP35-204ENST00000530267 IDH1O75874 414 aaKnown RBP17.94■□□□□ 0.46
USP35-204ENST00000530267 FAM98CQ17RN3 349 aaKnown RBP17.94■□□□□ 0.46
USP35-204ENST00000530267 NCOA5Q9HCD5 579 aaKnown RBP17.94■□□□□ 0.46
USP35-204ENST00000530267 SLIT2O94813 1529 aa17.94■□□□□ 0.46
USP35-204ENST00000530267 WNK3Q9BYP7 1800 aa17.94■□□□□ 0.46
USP35-204ENST00000530267 HMGB1P09429 215 aaKnown RBP17.93■□□□□ 0.46
USP35-204ENST00000530267 GPHNQ9NQX3 736 aaPredicted RBP17.93■□□□□ 0.46
USP35-204ENST00000530267 TFIP11Q9UBB9 837 aaKnown RBP17.93■□□□□ 0.46
USP35-204ENST00000530267 ANKRD36CQ5JPF3 1778 aa17.93■□□□□ 0.46
USP35-204ENST00000530267 LAMA4Q16363 1823 aa17.93■□□□□ 0.46
USP35-204ENST00000530267 FGAP02671 866 aa17.93■□□□□ 0.46
USP35-204ENST00000530267 CCDC173Q0VFZ6 552 aa17.93■□□□□ 0.46
USP35-204ENST00000530267 LRRFIP1Q32MZ4 808 aaKnown RBP17.93■□□□□ 0.46
USP35-204ENST00000530267 SLC9C2Q5TAH2 1124 aa17.93■□□□□ 0.46
USP35-204ENST00000530267 SMIM5Q71RC9 77 aa17.93■□□□□ 0.46
USP35-204ENST00000530267 NIP7Q9Y221 180 aaKnown RBP eCLIP17.93■□□□□ 0.46
USP35-204ENST00000530267 CCDC102BQ68D86 513 aa17.92■□□□□ 0.46
USP35-204ENST00000530267 UTP14AQ9BVJ6 771 aaKnown RBP17.92■□□□□ 0.46
USP35-204ENST00000530267 PIH1D3Q9NQM4 214 aaKnown RBP17.92■□□□□ 0.46
USP35-204ENST00000530267 GPAA1O43292 621 aa17.92■□□□□ 0.46
USP35-204ENST00000530267 ZFYP08048 801 aaPredicted RBP17.92■□□□□ 0.46
USP35-204ENST00000530267 EXOSC10Q01780 885 aaKnown RBP17.92■□□□□ 0.46
USP35-204ENST00000530267 APPBP2Q92624 585 aa17.92■□□□□ 0.46
USP35-204ENST00000530267 MPHOSPH8Q99549 860 aa17.92■□□□□ 0.46
USP35-204ENST00000530267 TSPY26PQ9H489 355 aa17.92■□□□□ 0.46
USP35-204ENST00000530267 CAMTA2O94983 1202 aa17.91■□□□□ 0.46
USP35-204ENST00000530267 MYH14Q7Z406 1995 aaKnown RBP17.91■□□□□ 0.46
USP35-204ENST00000530267 FAM184AQ8NB25 1140 aa17.91■□□□□ 0.46
USP35-204ENST00000530267 H3BQV1 296 aa17.9■□□□□ 0.46
USP35-204ENST00000530267 KRT85P78386 507 aa17.9■□□□□ 0.46
USP35-204ENST00000530267 IMMTQ16891 758 aaKnown RBP17.9■□□□□ 0.46
USP35-204ENST00000530267 CCDC183Q5T5S1 534 aa17.9■□□□□ 0.46
USP35-204ENST00000530267 IFFO2Q5TF58 517 aa17.9■□□□□ 0.46
USP35-204ENST00000530267 TTC6Q86TZ1 520 aa17.9■□□□□ 0.46
USP35-204ENST00000530267 C8orf37Q96NL8 207 aa17.9■□□□□ 0.46
USP35-204ENST00000530267 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.9■□□□□ 0.46
USP35-204ENST00000530267 LTBP4Q8N2S1 1624 aa17.9■□□□□ 0.46
USP35-204ENST00000530267 SPEF2Q9C093 1822 aa17.9■□□□□ 0.46
USP35-204ENST00000530267 APPP05067 770 aa17.9■□□□□ 0.46
USP35-204ENST00000530267 PUM3Q15397 648 aaKnown RBP17.9■□□□□ 0.46
USP35-204ENST00000530267 PFKFB2O60825 505 aa17.89■□□□□ 0.45
USP35-204ENST00000530267 PHF14O94880 888 aa17.89■□□□□ 0.45
USP35-204ENST00000530267 CSPP1Q1MSJ5 1256 aa17.89■□□□□ 0.45
USP35-204ENST00000530267 RAB11FIP4Q86YS3 637 aa17.89■□□□□ 0.45
USP35-204ENST00000530267 PPP1R9BQ96SB3 815 aa17.89■□□□□ 0.45
USP35-204ENST00000530267 NRAPQ86VF7 1730 aa17.89■□□□□ 0.45
USP35-204ENST00000530267 MYO5AQ9Y4I1 1855 aaKnown RBP17.89■□□□□ 0.45
USP35-204ENST00000530267 ESPNB1AK53 854 aa17.89■□□□□ 0.45
USP35-204ENST00000530267 CTDNEP1O95476 244 aa17.89■□□□□ 0.45
USP35-204ENST00000530267 PTF1AQ7RTS3 328 aa17.89■□□□□ 0.45
USP35-204ENST00000530267 CTNNA3Q9UI47 895 aa17.89■□□□□ 0.45
USP35-204ENST00000530267 WWC3Q9ULE0 1092 aa17.89■□□□□ 0.45
USP35-204ENST00000530267 AKAP11Q9UKA4 1901 aa17.89■□□□□ 0.45
USP35-204ENST00000530267 GIMAP6Q6P9H5 292 aa17.88■□□□□ 0.45
USP35-204ENST00000530267 TICAM2Q86XR7 235 aa17.88■□□□□ 0.45
USP35-204ENST00000530267 NSUN7Q8NE18 718 aaKnown RBP17.88■□□□□ 0.45
USP35-204ENST00000530267 LPIN2Q92539 896 aa17.88■□□□□ 0.45
USP35-204ENST00000530267 MROH5Q6ZUA9 1318 aa17.88■□□□□ 0.45
USP35-204ENST00000530267 PTPDC1A2A3K4 754 aa17.88■□□□□ 0.45
USP35-204ENST00000530267 ADD2P35612 726 aa17.88■□□□□ 0.45
USP35-204ENST00000530267 BICDL1Q6ZP65 573 aa17.88■□□□□ 0.45
USP35-204ENST00000530267 DENND2AQ9ULE3 1009 aa17.88■□□□□ 0.45
USP35-204ENST00000530267 ZNF532Q9HCE3 1301 aa17.87■□□□□ 0.45
USP35-204ENST00000530267 PDIA3P30101 505 aaKnown RBP17.87■□□□□ 0.45
USP35-204ENST00000530267 CEBPZQ03701 1054 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms