RNA–Protein interactions for RNA: ENST00000529379.1

NUP98-216, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-216ENST00000529379 M0R082 166 aa8.53□□□□□ -1.04
NUP98-216ENST00000529379 GADD45BO75293 160 aaPredicted RBP8.53□□□□□ -1.04
NUP98-216ENST00000529379 RGS9O75916 674 aaPredicted RBP8.53□□□□□ -1.04
NUP98-216ENST00000529379 GRIK5Q16478 980 aa8.53□□□□□ -1.04
NUP98-216ENST00000529379 CEP135Q66GS9 1140 aa8.53□□□□□ -1.04
NUP98-216ENST00000529379 NEDD1Q8NHV4 660 aa8.53□□□□□ -1.04
NUP98-216ENST00000529379 ZNF417Q8TAU3 575 aa8.53□□□□□ -1.04
NUP98-216ENST00000529379 TTC9Q92623 222 aa8.53□□□□□ -1.04
NUP98-216ENST00000529379 ZNF587Q96SQ5 575 aaPredicted RBP8.53□□□□□ -1.04
NUP98-216ENST00000529379 JPH1Q9HDC5 661 aaPredicted RBP8.53□□□□□ -1.04
NUP98-216ENST00000529379 NLRP2Q9NX02 1062 aa8.53□□□□□ -1.04
NUP98-216ENST00000529379 PARP2Q9UGN5 583 aa8.53□□□□□ -1.04
NUP98-216ENST00000529379 FAM181BA6NEQ2 426 aa8.52□□□□□ -1.05
NUP98-216ENST00000529379 ZNF326Q5BKZ1 582 aaKnown RBP8.52□□□□□ -1.05
NUP98-216ENST00000529379 TMEM102Q8N9M5 508 aaPredicted RBP8.52□□□□□ -1.05
NUP98-216ENST00000529379 TCF12Q99081 682 aa8.52□□□□□ -1.05
NUP98-216ENST00000529379 POP1Q99575 1024 aaKnown RBP8.52□□□□□ -1.05
NUP98-216ENST00000529379 SUV39H2Q9H5I1 410 aa8.52□□□□□ -1.05
NUP98-216ENST00000529379 LIN7BQ9HAP6 207 aa8.52□□□□□ -1.05
NUP98-216ENST00000529379 ENAMQ9NRM1 1142 aa8.52□□□□□ -1.05
NUP98-216ENST00000529379 TRIM33Q9UPN9 1127 aa8.52□□□□□ -1.05
NUP98-216ENST00000529379 DGKGP49619 791 aa8.51□□□□□ -1.05
NUP98-216ENST00000529379 FGD1P98174 961 aa8.51□□□□□ -1.05
NUP98-216ENST00000529379 GRM2Q14416 872 aa8.51□□□□□ -1.05
NUP98-216ENST00000529379 GLIS3Q8NEA6 775 aa8.51□□□□□ -1.05
NUP98-216ENST00000529379 NXPE3Q969Y0 559 aa8.51□□□□□ -1.05
NUP98-216ENST00000529379 FAM161BQ96MY7 647 aa8.51□□□□□ -1.05
NUP98-216ENST00000529379 BCO2Q9BYV7 579 aa8.51□□□□□ -1.05
NUP98-216ENST00000529379 OSBPL7Q9BZF2 842 aa8.51□□□□□ -1.05
NUP98-216ENST00000529379 EHD4Q9H223 541 aa8.51□□□□□ -1.05
NUP98-216ENST00000529379 PDE2AO00408 941 aaPredicted RBP8.5□□□□□ -1.05
NUP98-216ENST00000529379 SMNDC1O75940 238 aaKnown RBP eCLIP8.5□□□□□ -1.05
NUP98-216ENST00000529379 AFF1P51825 1210 aaKnown RBP8.5□□□□□ -1.05
NUP98-216ENST00000529379 GDF6Q6KF10 455 aaPredicted RBP8.5□□□□□ -1.05
NUP98-216ENST00000529379 NXPE4Q6UWF7 544 aa8.5□□□□□ -1.05
NUP98-216ENST00000529379 CCNJLQ8IV13 435 aa8.5□□□□□ -1.05
NUP98-216ENST00000529379 ZNF428Q96B54 188 aa8.5□□□□□ -1.05
NUP98-216ENST00000529379 METTL12A8MUP2 240 aa8.49□□□□□ -1.05
NUP98-216ENST00000529379 LILRB5O75023 590 aa8.49□□□□□ -1.05
NUP98-216ENST00000529379 GNA15P30679 374 aa8.49□□□□□ -1.05
NUP98-216ENST00000529379 SNRPNP63162 240 aaKnown RBP8.49□□□□□ -1.05
NUP98-216ENST00000529379 DAB2P98082 770 aa8.49□□□□□ -1.05
NUP98-216ENST00000529379 XPCQ01831 940 aaPredicted RBP8.49□□□□□ -1.05
NUP98-216ENST00000529379 COL9A3Q14050 684 aaPredicted RBP8.49□□□□□ -1.05
NUP98-216ENST00000529379 BHLHE41Q9C0J9 482 aaPredicted RBP8.49□□□□□ -1.05
NUP98-216ENST00000529379 RRAGCQ9HB90 399 aa8.49□□□□□ -1.05
NUP98-216ENST00000529379 PRDM6Q9NQX0 595 aa8.49□□□□□ -1.05
NUP98-216ENST00000529379 SPG7Q9UQ90 795 aa8.49□□□□□ -1.05
NUP98-216ENST00000529379 GRIA4P48058 902 aa8.48□□□□□ -1.05
NUP98-216ENST00000529379 PRPF40BQ6NWY9 871 aaKnown RBP8.48□□□□□ -1.05
NUP98-216ENST00000529379 TMC4Q7Z404 712 aa8.48□□□□□ -1.05
NUP98-216ENST00000529379 LACRTQ9GZZ8 138 aa8.48□□□□□ -1.05
NUP98-216ENST00000529379 ABCB6Q9NP58 842 aa8.48□□□□□ -1.05
NUP98-216ENST00000529379 UNCXA6NJT0 531 aa8.47□□□□□ -1.05
NUP98-216ENST00000529379 NID1P14543 1247 aa8.47□□□□□ -1.05
NUP98-216ENST00000529379 BAG6P46379 1132 aa8.47□□□□□ -1.05
NUP98-216ENST00000529379 PSMD2Q13200 908 aa8.47□□□□□ -1.05
NUP98-216ENST00000529379 SPRED3Q2MJR0 410 aa8.47□□□□□ -1.05
NUP98-216ENST00000529379 ASAP3Q8TDY4 903 aa8.47□□□□□ -1.05
NUP98-216ENST00000529379 FRMD6Q96NE9 622 aa8.47□□□□□ -1.05
NUP98-216ENST00000529379 ADAM19Q9H013 955 aa8.47□□□□□ -1.05
NUP98-216ENST00000529379 C12orf49Q9H741 205 aa8.47□□□□□ -1.05
NUP98-216ENST00000529379 AK5Q9Y6K8 562 aa8.47□□□□□ -1.05
NUP98-216ENST00000529379 GIPC1O14908 333 aa8.46□□□□□ -1.06
NUP98-216ENST00000529379 LINC00114Q6XXX2 140 aa8.46□□□□□ -1.06
NUP98-216ENST00000529379 MUC3BQ9H195 1237 aa8.46□□□□□ -1.06
NUP98-216ENST00000529379 SH2B1Q9NRF2 756 aaPredicted RBP8.46□□□□□ -1.06
NUP98-216ENST00000529379 TRAK1Q9UPV9 953 aa8.46□□□□□ -1.06
NUP98-216ENST00000529379 A0A096LPE4 126 aa8.45□□□□□ -1.06
NUP98-216ENST00000529379 TMEM238LA0A1B0GVL6 79 aa8.45□□□□□ -1.06
NUP98-216ENST00000529379 A0A1W2PPZ6 126 aa8.45□□□□□ -1.06
NUP98-216ENST00000529379 PTPRAP18433 802 aa8.45□□□□□ -1.06
NUP98-216ENST00000529379 FCGRTP55899 365 aa8.45□□□□□ -1.06
NUP98-216ENST00000529379 MSL1Q68DK7 614 aa8.45□□□□□ -1.06
NUP98-216ENST00000529379 ILDR2Q71H61 639 aa8.45□□□□□ -1.06
NUP98-216ENST00000529379 IL22RA1Q8N6P7 574 aa8.45□□□□□ -1.06
NUP98-216ENST00000529379 SOX13Q9UN79 622 aa8.45□□□□□ -1.06
NUP98-216ENST00000529379 EPHA1P21709 976 aa8.44□□□□□ -1.06
NUP98-216ENST00000529379 EIF4BP23588 611 aaKnown RBP8.44□□□□□ -1.06
NUP98-216ENST00000529379 CDC27P30260 824 aa8.44□□□□□ -1.06
NUP98-216ENST00000529379 KCNMA1Q12791 1236 aa8.44□□□□□ -1.06
NUP98-216ENST00000529379 BSNDQ8WZ55 320 aa8.44□□□□□ -1.06
NUP98-216ENST00000529379 TRIM11Q96F44 468 aa8.44□□□□□ -1.06
NUP98-216ENST00000529379 SRCIN1Q9C0H9 1055 aa8.44□□□□□ -1.06
NUP98-216ENST00000529379 SORBS3O60504 671 aa8.43□□□□□ -1.06
NUP98-216ENST00000529379 USP17L7P0C7H9 530 aa8.43□□□□□ -1.06
NUP98-216ENST00000529379 ITPKAP23677 461 aa8.43□□□□□ -1.06
NUP98-216ENST00000529379 MRPL58Q14197 206 aaKnown RBP8.43□□□□□ -1.06
NUP98-216ENST00000529379 VN1R5Q7Z5H4 357 aa8.43□□□□□ -1.06
NUP98-216ENST00000529379 WFDC8Q8IUA0 241 aa8.43□□□□□ -1.06
NUP98-216ENST00000529379 DMRTC2Q8IXT2 367 aaPredicted RBP8.43□□□□□ -1.06
NUP98-216ENST00000529379 CACTIN-AS1Q8N1I8 211 aa8.43□□□□□ -1.06
NUP98-216ENST00000529379 FAM8A1Q9UBU6 413 aa8.43□□□□□ -1.06
NUP98-216ENST00000529379 CNTNAP5Q8WYK1 1306 aa8.43□□□□□ -1.06
NUP98-216ENST00000529379 CTSHP09668 335 aa8.42□□□□□ -1.06
NUP98-216ENST00000529379 RBM25P49756 843 aaKnown RBP8.42□□□□□ -1.06
NUP98-216ENST00000529379 DTHD1Q6ZMT9 781 aa8.42□□□□□ -1.06
NUP98-216ENST00000529379 C3orf58Q8NDZ4 430 aa8.42□□□□□ -1.06
NUP98-216ENST00000529379 MRRFQ96E11 262 aaKnown RBP8.42□□□□□ -1.06
NUP98-216ENST00000529379 ZNF576Q9H609 170 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms