RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 C7orf43Q8WVR3 580 aa7.89□□□□□ -1.15
ATPAF1-209ENST00000529214 RPGRQ92834 1020 aaKnown RBP7.89□□□□□ -1.15
ATPAF1-209ENST00000529214 RBM17Q96I25 401 aaKnown RBP7.89□□□□□ -1.15
ATPAF1-209ENST00000529214 API5Q9BZZ5 524 aaKnown RBP7.89□□□□□ -1.15
ATPAF1-209ENST00000529214 SRCIN1Q9C0H9 1055 aa7.89□□□□□ -1.15
ATPAF1-209ENST00000529214 NAP1L2Q9ULW6 460 aaPredicted RBP7.89□□□□□ -1.15
ATPAF1-209ENST00000529214 N4BP2Q86UW6 1770 aaPredicted RBP7.89□□□□□ -1.15
ATPAF1-209ENST00000529214 ARFGEF2Q9Y6D5 1785 aa7.89□□□□□ -1.15
ATPAF1-209ENST00000529214 ANKRD31Q8N7Z5 1873 aa7.89□□□□□ -1.15
ATPAF1-209ENST00000529214 ANKRD36CQ5JPF3 1778 aa7.89□□□□□ -1.15
ATPAF1-209ENST00000529214 KIF16BQ96L93 1317 aa7.89□□□□□ -1.15
ATPAF1-209ENST00000529214 C21orf2O43822 256 aa7.88□□□□□ -1.15
ATPAF1-209ENST00000529214 KCNA1Q09470 495 aa7.88□□□□□ -1.15
ATPAF1-209ENST00000529214 PRPF40BQ6NWY9 871 aaKnown RBP7.88□□□□□ -1.15
ATPAF1-209ENST00000529214 ARHGAP27Q6ZUM4 889 aa7.88□□□□□ -1.15
ATPAF1-209ENST00000529214 UBE3BQ7Z3V4 1068 aa7.88□□□□□ -1.15
ATPAF1-209ENST00000529214 YTHDC1Q96MU7 727 aaKnown RBP7.88□□□□□ -1.15
ATPAF1-209ENST00000529214 PLA2G12BQ9BX93 195 aa7.88□□□□□ -1.15
ATPAF1-209ENST00000529214 PCDHB13Q9Y5F0 798 aa7.88□□□□□ -1.15
ATPAF1-209ENST00000529214 GRM8O00222 908 aa7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 BBOX1O75936 387 aa7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 CSF1RP07333 972 aa7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 DDX46Q7L014 1031 aaKnown RBP7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 TTLL11Q8NHH1 800 aa7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 FRAT1Q92837 279 aaPredicted RBP7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 USP44Q9H0E7 712 aa7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 C9orf78Q9NZ63 289 aaPredicted RBP7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 UTYO14607 1347 aa7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 NBPF7P0C2Y1 421 aaPredicted RBP7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 TRIM27P14373 513 aa7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 CCT4P50991 539 aaKnown RBP7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 GRAPQ13588 217 aa7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 TTLL12Q14166 644 aaPredicted RBP7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 CCDC152Q4G0S7 254 aa7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 SOGA3Q5TF21 947 aa7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 ZKSCAN2Q63HK3 967 aa7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 INTS3Q68E01 1043 aaKnown RBP7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 CC2D2BQ6DHV5 1058 aa7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 ATF7IPQ6VMQ6 1270 aa7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 FBXO22Q8NEZ5 403 aa7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 GRAPLQ8TC17 118 aaPredicted RBP7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 PSMD1Q99460 953 aa7.87□□□□□ -1.15
ATPAF1-209ENST00000529214 ABCC4O15439 1325 aa7.86□□□□□ -1.15
ATPAF1-209ENST00000529214 BRCA1P38398 1863 aaKnown RBP7.86□□□□□ -1.15
ATPAF1-209ENST00000529214 IRF6O14896 467 aa7.86□□□□□ -1.15
ATPAF1-209ENST00000529214 CTSWP56202 376 aa7.86□□□□□ -1.15
ATPAF1-209ENST00000529214 RPS8P62241 208 aaKnown RBP7.86□□□□□ -1.15
ATPAF1-209ENST00000529214 FOXO4P98177 505 aa7.86□□□□□ -1.15
ATPAF1-209ENST00000529214 TEX2Q8IWB9 1127 aa7.86□□□□□ -1.15
ATPAF1-209ENST00000529214 SP8Q8IXZ3 490 aa7.86□□□□□ -1.15
ATPAF1-209ENST00000529214 CELF1Q92879 486 aaKnown RBP7.86□□□□□ -1.15
ATPAF1-209ENST00000529214 CRISPLD2Q9H0B8 497 aa7.86□□□□□ -1.15
ATPAF1-209ENST00000529214 SEC31BQ9NQW1 1179 aa7.86□□□□□ -1.15
ATPAF1-209ENST00000529214 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.86□□□□□ -1.15
ATPAF1-209ENST00000529214 RCAN3Q9UKA8 241 aa7.86□□□□□ -1.15
ATPAF1-209ENST00000529214 TNRC6CQ9HCJ0 1690 aaKnown RBP7.85□□□□□ -1.15
ATPAF1-209ENST00000529214 NFKBIEO00221 500 aa7.85□□□□□ -1.15
ATPAF1-209ENST00000529214 PPEF1O14829 653 aaPredicted RBP7.85□□□□□ -1.15
ATPAF1-209ENST00000529214 IRX5P78411 483 aaPredicted RBP7.85□□□□□ -1.15
ATPAF1-209ENST00000529214 GRIPAP1Q4V328 841 aa7.85□□□□□ -1.15
ATPAF1-209ENST00000529214 CCDC93Q567U6 631 aa7.85□□□□□ -1.15
ATPAF1-209ENST00000529214 EPHA10Q5JZY3 1008 aa7.85□□□□□ -1.15
ATPAF1-209ENST00000529214 OLFM4Q6UX06 510 aa7.85□□□□□ -1.15
ATPAF1-209ENST00000529214 RTKN2Q8IZC4 609 aa7.85□□□□□ -1.15
ATPAF1-209ENST00000529214 FAM177A1Q8N128 213 aaPredicted RBP7.85□□□□□ -1.15
ATPAF1-209ENST00000529214 IPO4Q8TEX9 1081 aaKnown RBP7.85□□□□□ -1.15
ATPAF1-209ENST00000529214 KAZALD1Q96I82 304 aa7.85□□□□□ -1.15
ATPAF1-209ENST00000529214 CCDC85AQ96PX6 553 aaPredicted RBP7.85□□□□□ -1.15
ATPAF1-209ENST00000529214 TMEM106CQ9BVX2 250 aa7.85□□□□□ -1.15
ATPAF1-209ENST00000529214 GREM2Q9H772 168 aa7.85□□□□□ -1.15
ATPAF1-209ENST00000529214 TNNQ9UQP3 1299 aa7.85□□□□□ -1.15
ATPAF1-209ENST00000529214 ATP6V0A2Q9Y487 856 aa7.85□□□□□ -1.15
ATPAF1-209ENST00000529214 SLX4Q8IY92 1834 aa7.84□□□□□ -1.15
ATPAF1-209ENST00000529214 DLEC1Q9Y238 1755 aa7.84□□□□□ -1.15
ATPAF1-209ENST00000529214 BRD1O95696 1058 aa7.84□□□□□ -1.15
ATPAF1-209ENST00000529214 PRELPP51888 382 aa7.84□□□□□ -1.15
ATPAF1-209ENST00000529214 SH3D19Q5HYK7 790 aa7.84□□□□□ -1.15
ATPAF1-209ENST00000529214 LMBR1LQ6UX01 489 aa7.84□□□□□ -1.15
ATPAF1-209ENST00000529214 TMC4Q7Z404 712 aa7.84□□□□□ -1.15
ATPAF1-209ENST00000529214 SUCLG2Q96I99 432 aa7.84□□□□□ -1.15
ATPAF1-209ENST00000529214 TMX4Q9H1E5 349 aaPredicted RBP7.84□□□□□ -1.15
ATPAF1-209ENST00000529214 COL11A2P13942 1736 aaPredicted RBP7.84□□□□□ -1.15
ATPAF1-209ENST00000529214 LTBP3Q9NS15 1303 aa7.84□□□□□ -1.16
ATPAF1-209ENST00000529214 DDX60Q8IY21 1712 aaKnown RBP7.83□□□□□ -1.16
ATPAF1-209ENST00000529214 LMNB1P20700 586 aa7.83□□□□□ -1.16
ATPAF1-209ENST00000529214 ITGA6P23229 1130 aa7.83□□□□□ -1.16
ATPAF1-209ENST00000529214 EMP3P54852 163 aa7.83□□□□□ -1.16
ATPAF1-209ENST00000529214 FKBP4Q02790 459 aaKnown RBP eCLIP7.83□□□□□ -1.16
ATPAF1-209ENST00000529214 RASSF7Q02833 373 aa7.83□□□□□ -1.16
ATPAF1-209ENST00000529214 RABL6Q3YEC7 729 aaPredicted RBP7.83□□□□□ -1.16
ATPAF1-209ENST00000529214 TMED8Q6PL24 325 aaPredicted RBP7.83□□□□□ -1.16
ATPAF1-209ENST00000529214 SLC51AQ86UW1 340 aa7.83□□□□□ -1.16
ATPAF1-209ENST00000529214 ANKRD18AQ8IVF6 992 aa7.83□□□□□ -1.16
ATPAF1-209ENST00000529214 DZIP1LQ8IYY4 767 aaKnown RBP7.83□□□□□ -1.16
ATPAF1-209ENST00000529214 CNPY4Q8N129 248 aa7.83□□□□□ -1.16
ATPAF1-209ENST00000529214 TMEM57Q8N5G2 664 aa7.83□□□□□ -1.16
ATPAF1-209ENST00000529214 CDC5LQ99459 802 aaKnown RBP7.83□□□□□ -1.16
ATPAF1-209ENST00000529214 TAOK3Q9H2K8 898 aa7.83□□□□□ -1.16
ATPAF1-209ENST00000529214 HDAC5Q9UQL6 1122 aa7.83□□□□□ -1.16
ATPAF1-209ENST00000529214 RTL9Q8NET4 1388 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms